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Domain combinations for 82708,_gap_,48403,52540,52540,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82708 - R3H domain
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Daphnia_pulex_   (Common water flea)   1
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   1
Thellungiella_halophila_v173 2
Medicago_truncatula_   (Barrel medic)   1
Linum_usitatissimum_v200   (Flax)   1
Vitis_vinifera_   (Wine grape)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_nivara_22 0
Musa_balbisiana   (Balbis banana)   0
Amborella_trichopoda_22 1
Physcomitrella_patens 1
Micromonas_pusilla_CCMP1545_v3.0 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   1

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
STRING_v9.0.5_(STRING) 3
NCBI_2017_08_genome 58
Uniprot_2018_03_genome 1045

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