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Domain combinations for 88659,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Saccoglossus_kowalevskii_v3.0 0
Caenorhabditis_japonica_ 0
Hydra_vulgaris 0
Phycomyces_blakesleeanus_ 1
Tremella_mesenterica_   (Witches' butter)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Gossypium_raimondii_v221 0
Capsella_rubella_v183 0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_urartu_22 0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_nivara_22 0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Musa_balbisiana   (Balbis banana)   0
Physcomitrella_patens 0
Chlorella_variabilis_sp._NC64A_ 0
Volvox_carteri_f._nagariensis_ 0
Ostreococcus_sp._RCC809_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Cyanophora_paradoxa_ 0
Ectocarpus_siliculosus 0
Phytophthora_capsici_ 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Thermobaculum_terrenum_ATCC_BAA-798 0
Acaryochloris_marina_MBIC11017 0
Thermosynechococcus_elongatus_BP-1 0
Trichodesmium_erythraeum_IMS101 0
Gloeocapsa_sp._PCC_7428 0
Halothece_sp._PCC_7418 0
Gloeobacter_violaceus_PCC_7421 0
Calothrix_sp._PCC_7507 0
Nostoc_sp._PCC_7107 0
Nostoc_punctiforme_PCC_73102 0
Nostoc_sp._PCC_7120 0
Candidatus_Phytoplasma_mali 0
Mycoplasma_haemocanis_str._Illinois 0
Mycoplasma_wenyonii_str._Massachusetts 0
Mycoplasma_suis_KI3806 0
Mycoplasma_haemofelis_Ohio2 0
Conexibacter_woesei_DSM_14684 1
Eggerthella_sp._YY7918 0
Eggerthella_lenta_DSM_2243 0
Ilumatobacter_coccineus 0
Thermobispora_bispora_DSM_43833 0
Nakamurella_multipartita_DSM_44233 0
Acidothermus_cellulolyticus_11B 0
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 0
Geodermatophilus_obscurus_DSM_43160 0
Kineococcus_radiotolerans_SRS30216 0
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 0
Frankia_symbiont_of_Datisca_glomerata 0
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 0
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 0
Saccharomonospora_viridis_DSM_43017 1
Pseudonocardia_dioxanivorans_CB1190 0
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 0
Nocardioides_sp._JS614 1
Propionibacterium_propionicum_F0230a 1
Propionibacterium_acnes_SK137 0
Microlunatus_phosphovorus_NM-1 0
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1
Salinispora_arenicola_CNS-205 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_equi_103S 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 1
Nocardia_cyriacigeorgica_GUH-2 2
Nocardia_farcinica_IFM_10152 0
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 0
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_avium_104 0
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 0
Mycobacterium_marinum_M 0
Mycobacterium_smegmatis_str._MC2_155 0
Corynebacterium_resistens_DSM_45100 0
Corynebacterium_kroppenstedtii_DSM_44385 0
Sanguibacter_keddieii_DSM_10542 0
Beutenbergia_cavernae_DSM_12333 0
Leifsonia_xyli_subsp._xyli_str._CTCB07 0
Microbacterium_testaceum_StLB037 0
Jonesia_denitrificans_DSM_20603 0
Intrasporangium_calvum_DSM_43043 0
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 1
Cellulomonas_flavigena_DSM_20109 0
Cellulomonas_fimi_ATCC_484 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_aurescens_TC1 0
Arthrobacter_arilaitensis_Re117 0
Kocuria_rhizophila_DC2201 0
Rothia_mucilaginosa_DY-18 0
Arthrobacter_sp._Rue61a 0
Renibacterium_salmoninarum_ATCC_33209 0
Bifidobacterium_longum_subsp._longum_JDM301 0
Bifidobacterium_animalis_subsp._lactis_Bl-04 0
Bifidobacterium_dentium_Bd1 0
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Bifidobacterium_bifidum_S17 0
Mobiluncus_curtisii_ATCC_43063 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1
Thermomicrobium_roseum_DSM_5159 0
Sphaerobacter_thermophilus_DSM_20745 0
Truepera_radiovictrix_DSM_17093 0
Deinococcus_deserti_VCD115 0
Deinococcus_radiodurans_R1 1
Meiothermus_silvanus_DSM_9946 0
Meiothermus_ruber_DSM_1279 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Symbiobacterium_thermophilum_IAM_14863 0
Ruminococcus_albus_7 1
Thermaerobacter_marianensis_DSM_12885 0
Oscillibacter_valericigenes_Sjm18-20 2
Candidatus_Desulforudis_audaxviator_MP104C 1
Pelotomaculum_thermopropionicum_SI 1
Desulfosporosinus_acidiphilus_SJ4 0
Desulfosporosinus_orientis_DSM_765 0
Syntrophobotulus_glycolicus_DSM_8271 2
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_acetoxidans_DSM_771 1
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1
Acetobacterium_woodii_DSM_1030 0
Eubacterium_limosum_KIST612 0
Clostridium_sticklandii_DSM_519 1
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 1
Clostridium_lentocellum_DSM_5427 0
[Ruminococcus]_obeum 0
Coprococcus_sp._ART55/1 1
Butyrivibrio_proteoclasticus_B316 0
Syntrophothermus_lipocalidus_DSM_12680 1
Alkaliphilus_oremlandii_OhILAs 0
Alkaliphilus_metalliredigens_QYMF 0
Clostridium_sp._BNL1100 1
Clostridium_novyi_NT 1
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 2
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_cellulovorans_743B 0
Clostridium_botulinum_A_str._ATCC_3502 1
Clostridium_acetobutylicum_ATCC_824 1
Thermosediminibacter_oceani_DSM_16646 1
Caldicellulosiruptor_obsidiansis_OB47 1
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_owensensis_OL 1
Caldicellulosiruptor_lactoaceticus_6A 1
Caldicellulosiruptor_kristjanssonii_177R1B 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1
Caldicellulosiruptor_bescii_DSM_6725 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1
Thermodesulfobium_narugense_DSM_14796 1
Ammonifex_degensii_KC4 1
Acetohalobium_arabaticum_DSM_5501 1
Halothermothrix_orenii_H_168 1
Halanaerobium_hydrogeniformans 1
Halanaerobium_praevalens_DSM_2228 1
Pediococcus_claussenii_ATCC_BAA-344 0
Pediococcus_pentosaceus_ATCC_25745 1
Exiguobacterium_sp._AT1b 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_polymyxa_M1 0
Oceanobacillus_iheyensis_HTE831 0
Geobacillus_sp._WCH70 0
Halobacillus_halophilus_DSM_2266 0
Bacillus_halodurans_C-125 1
Bacillus_anthracis_str._A0248 0
Bacillus_pseudofirmus_OF4 0
Bacillus_clausii_KSM-K16 0
Bacillus_cellulosilyticus_DSM_2522 1
Macrococcus_caseolyticus_JCSC5402 2
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1
Gemmatimonas_aurantiaca_T-27 0
Ignavibacterium_album_JCM_16511 0
Chlorobaculum_parvum_NCIB_8327 1
Chlorobium_tepidum_TLS 1
Chloroherpeton_thalassium_ATCC_35110 1
Haliscomenobacter_hydrossis_DSM_1100 0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 1
Cyclobacterium_marinum_DSM_745 1
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 0
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 0
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 0
Prevotella_melaninogenica_ATCC_25845 0
Prevotella_denticola_F0289 0
Prevotella_ruminicola_23 0
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 1
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 0
Sphingobacterium_sp._21 0
Owenweeksia_hongkongensis_DSM_17368 0
Capnocytophaga_ochracea_DSM_7271 0
Phycisphaera_mikurensis_NBRC_102666 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 0
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Opitutus_terrae_PB90-1 0
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Spirochaeta_smaragdinae_DSM_11293 0
Spirochaeta_thermophila_DSM_6192 1
Desulfurispirillum_indicum_S5 0
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 0
Deferribacter_desulfuricans_SSM1 1
Flexistipes_sinusarabici_DSM_4947 1
Elusimicrobium_minutum_Pei191 0
Dictyoglomus_turgidum_DSM_6724 0
Dictyoglomus_thermophilum_H-6-12 0
Caldisericum_exile_AZM16c01 1
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 0
Acidobacterium_capsulatum_ATCC_51196 0
Candidatus_Methylomirabilis_oxyfera 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1
Candidatus_Saccharimonas_aalborgensis 1
Sulfurospirillum_deleyianum_DSM_6946 1
Sulfurospirillum_barnesii_SES-3 1
Desulfobacca_acetoxidans_DSM_11109 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfotalea_psychrophila_LSv54 1
Desulfobacterium_autotrophicum_HRM2 2
Desulfococcus_oleovorans_Hxd3 1
Desulfovibrio_africanus_str._Walvis_Bay 1
Geobacter_daltonii_FRC-32 0
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 0
Geobacter_bemidjiensis_Bem 0
Pelobacter_propionicus_DSM_2379 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Azoarcus_sp._KH32C 0
Aromatoleum_aromaticum_EbN1 1
Methylibium_petroleiphilum_PM1 0
Rubrivivax_gelatinosus_IL144 0
Leptothrix_cholodnii_SP-6 0
Burkholderia_phytofirmans_PsJN 0
Burkholderia_phymatum_STM815 0
Burkholderia_xenovorans_LB400 1
Cupriavidus_taiwanensis_LMG_19424 1
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 3
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Ramlibacter_tataouinensis_TTB310 0
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 0
Polaromonas_sp._JS666 0
Variovorax_paradoxus_S110 0
Rhodoferax_ferrireducens_T118 0
Acidovorax_ebreus_TPSY 0
Acidovorax_sp._KKS102 0
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Comamonas_testosteroni_CNB-2 0
Candidatus_Zinderia_insecticola_CARI 0
Collimonas_fungivorans_Ter331 0
Advenella_kashmirensis_WT001 0
Bordetella_petrii_DSM_12804 0
Achromobacter_xylosoxidans_A8 0
Achromobacter_xylosoxidans 0
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Parvularcula_bermudensis_HTCC2503 0
Asticcacaulis_excentricus_CB_48 0
Caulobacter_crescentus_NA1000 0
Phenylobacterium_zucineum_HLK1 0
Sphingopyxis_alaskensis_RB2256 0
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 0
Hirschia_baltica_ATCC_49814 0
Pseudovibrio_sp._FO-BEG1 1
Roseobacter_litoralis_Och_149 1
Roseobacter_denitrificans_OCh_114 0
Tistrella_mobilis_KA081020-065 0
Rhodospirillum_centenum_SW 0
Azospirillum_brasilense_Sp245 0
Acidiphilium_cryptum_JF-5 0
Polymorphum_gilvum_SL003B-26A1 0
alpha_proteobacterium_HIMB5 0
Starkeya_novella_DSM_506 0
Xanthobacter_autotrophicus_Py2 0
Azorhizobium_caulinodans_ORS_571 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_sp._4-46 0
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 0
Ochrobactrum_anthropi_ATCC_49188 0
Sinorhizobium_fredii_NGR234 0
Rhizobium_etli_CIAT_652 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_radiobacter_K84 0
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Mesorhizobium_loti_MAFF303099 0
Pelagibacterium_halotolerans_B2 0
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 0
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 0
Cellvibrio_japonicus_Ueda107 0
Haemophilus_ducreyi_35000HP 0
Tolumonas_auensis_DSM_9187 0
Photobacterium_profundum_SS9 1
Idiomarina_loihiensis_L2TR 0
Shewanella_pealeana_ATCC_700345 0
Shewanella_woodyi_ATCC_51908 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 0
Halomonas_elongata_DSM_2581 0
Methylomicrobium_alcaliphilum 0
Rhodanobacter_denitrificans 0
Pseudoxanthomonas_spadix_BD-a59 0
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 0
Xanthomonas_campestris_pv._campestris_str._B100 0
Thioalkalivibrio_sp._K90mix 0
Pseudomonas_sp._UW4 0
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_stutzeri_A1501 0
Pseudomonas_putida_F1 1
Pseudomonas_protegens_Pf-5 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 1
Methylophaga_sp._JAM1 0
Nitrosopumilus_maritimus_SCM1 1
Desulfurococcus_kamchatkensis_1221n 1
Sulfolobus_solfataricus_P2 0
Thermofilum_sp._1910b 1
Thermofilum_pendens_Hrk_5 1
Vulcanisaeta_moutnovskia_768-28 1
Vulcanisaeta_distributa_DSM_14429 1
Methanocella_conradii_HZ254 1
Methanosaeta_harundinacea_6Ac 0
Methanosaeta_thermophila_PT 0
Methanosarcina_acetivorans_C2A 2
Methanosarcina_mazei_Go1 1
Methanosarcina_barkeri_str._Fusaro 1
Methanospirillum_hungatei_JF-1 1
Methanocorpusculum_labreanum_Z 1
Ferroglobus_placidus_DSM_10642 0
Thermococcus_sp._4557 1
Thermococcus_onnurineus_NA1 1
Thermococcus_kodakarensis_KOD1 1
Thermococcus_gammatolerans_EJ3 1
Thermococcus_sibiricus_MM_739 1
Thermococcus_barophilus_MP 1
Methanotorris_igneus_Kol_5 0
Methanothermococcus_okinawensis_IH1 1
Methanothermus_fervidus_DSM_2088 1
Methanothermobacter_marburgensis_str._Marburg 1
Methanothermobacter_thermautotrophicus_str._Delta_H 1

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Strains
Genome     Number
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 1
Cyanobium_gracile_PCC_6307 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Stanieria_cyanosphaera_PCC_7437 1
Anabaena_cylindrica_PCC_7122 0
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 1
Mycoplasma_parvum_str._Indiana 0
Candidatus_Mycoplasma_haemominutum_'Birmingham_1' 0
Mycoplasma_ovis_str._Michigan 0
Candidatus_Mycoplasma_haemolamae_str._Purdue 0
Mycoplasma_suis_str._Illinois 0
Mycoplasma_haemofelis_str._Langford_1 0
Gordonibacter_pamelaeae_7-10-1-b 0
Adlercreutzia_equolifaciens_DSM_19450 0
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Propionibacterium_avidum_44067 0
Propionibacterium_acnes_ATCC_11828 0
Propionibacterium_acnes_TypeIA2_P.acn31 0
Propionibacterium_acnes_TypeIA2_P.acn17 0
Propionibacterium_acnes_TypeIA2_P.acn33 0
Propionibacterium_acnes_C1 0
Propionibacterium_acnes_HL096PA1 0
Propionibacterium_acnes_6609 0
Propionibacterium_acnes_266 0
Propionibacterium_acnes_KPA171202 0
Propionibacterium_acidipropionici_ATCC_4875 0
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 0
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_liflandii_128FXT 0
Mycobacterium_sp._KMS 0
Mycobacterium_sp._MCS 0
Mycobacterium_yongonense_05-1390 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_avium_subsp._paratuberculosis_MAP4 0
Mycobacterium_avium_subsp._paratuberculosis_K-10 0
Mycobacterium_smegmatis_str._MC2_155 0
Mycobacterium_kansasii_ATCC_12478 0
Corynebacterium_maris_DSM_45190 0
Leifsonia_xyli_subsp._cynodontis_DSM_46306 0
Bifidobacterium_longum_NCC2705 0
Bifidobacterium_longum_DJO10A 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._longum_KACC_91563 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_F8 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_thermophilum_RBL67 0
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 0
Bifidobacterium_animalis_subsp._lactis_Bl12 0
Bifidobacterium_animalis_subsp._lactis_B420 0
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 0
Bifidobacterium_animalis_subsp._lactis_BLC1 0
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 0
Bifidobacterium_animalis_subsp._lactis_Bi-07 0
Bifidobacterium_animalis_subsp._lactis_V9 0
Bifidobacterium_animalis_subsp._lactis_DSM_10140 0
Bifidobacterium_animalis_subsp._lactis_BB-12 0
Bifidobacterium_animalis_subsp._lactis_AD011 0
Bifidobacterium_breve_UCC2003 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Chthonomonas_calidirosea_T49 0
Thermus_thermophilus_JL-18 0
Thermus_thermophilus_SG0.5JP17-16 1
Eubacterium_siraeum_V10Sc8a 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Desulfosporosinus_meridiei_DSM_13257 1
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Coprococcus_catus_GD/7 0
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_kluyveri_NBRC_12016 2
Clostridium_perfringens_SM101 1
Clostridium_pasteurianum_BC1 0
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_BKT015925 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1
Thermacetogenium_phaeum_DSM_12270 1
Halobacteroides_halobius_DSM_5150 1
Lactobacillus_plantarum_ZJ316 1
Streptococcus_constellatus_subsp._pharyngis_C1050 1
Streptococcus_constellatus_subsp._pharyngis_C818 1
Streptococcus_constellatus_subsp._pharyngis_C232 1
Streptococcus_suis_SS12 1
Thermobacillus_composti_KWC4 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Paenibacillus_polymyxa_E681 0
Bacillus_infantis_NRRL_B-14911 0
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_MC28 1
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Bacillus_megaterium_WSH-002 0
Chlorobium_phaeobacteroides_BS1 1
Echinicola_vietnamensis_DSM_17526 0
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 0
Treponema_pedis_str._T_A4 1
Desulfobacula_toluolica_Tol2 1
Geobacter_sp._M18 0
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_phenoliruptrix_BR3459a 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 0
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Caulobacter_crescentus_CB15 0
Octadecabacter_arcticus_238 0
Brucella_ceti_TE28753-12 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_tropici_CIAT_899 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Mesorhizobium_australicum_WSM2073 0
Rhodopseudomonas_palustris_HaA2 0
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 0
Vibrio_nigripulchritudo_VibrioScope 0
Idiomarina_loihiensis_GSL_199 0
Stenotrophomonas_maltophilia_D457 0
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Thioalkalivibrio_nitratireducens_DSM_14787 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 0
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_P12b 0
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_H8234 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PAO1 0
Methanomethylovorans_hollandica_DSM_15978 1
Thermococcus_litoralis_DSM_5473 1
Methanobacterium_sp._SWAN-1 1

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Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
Guillardia_theta_(nucleomorph) 0
NCBI_plasmid_sequences_(Plasmids) 20
STRING_v9.0.5_(STRING) 78
Uniprot_2018_03_genome 8172
NCBI_2017_08_genome 3451
Protozoadb_2010_08_(Protozoadb) 0
UniProt__viral_sequences_(Viral) 3
TargetDB__(Targets) 3
NCBI_viral_sequences_(Viral) 14

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