SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,101936,101936,101936 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gossypium_raimondii_v221 0
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Fragaria_vesca_   (Wild strawberry)   0
Vitis_vinifera_   (Wine grape)   0
Actinidia_chinensis_Hongyang_ 1
Triticum_urartu_22 1
Aegilops_tauschii_22 2
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Panicum_virgatum_v202   (Switchgrass)   0

Others
Genome     Number
NCBI_2017_08_genome 24
Uniprot_2018_03_genome 224
STRING_v9.0.5_(STRING) 0

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