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Domain combinations for _gap_,141072,_gap_,53300,_gap_,51120 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

141072 - CalX-like
53300 - vWA-like
51120 - beta-Roll

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
uncultured_Sulfuricurvum_sp._RIFRC-1 0
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_splendidus_LGP32 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 0
Pseudomonas_putida_F1 0
Pseudomonas_sp._VLB120 1

Strains
Genome     Number
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Vibrio_parahaemolyticus_BB22OP 1
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 0

Others
Genome     Number
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 3971
NCBI_2017_08_genome 574

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