SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,46689,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46689 - Homeodomain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   316
Pan_troglodytes_76_2.1.4   (Chimpanzee)   133
Gorilla_gorilla_76_3.1   (Western gorilla)   197
Pongo_abelii_76_2   (Sumatran orangutan)   122
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   118
Papio_anubis_76   (Olive baboon)   139
Macaca_mulatta_76_1   (Rhesus monkey)   173
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   264
Otolemur_garnettii_76_3   (Small-eared galago)   132
Microcebus_murinus_76_1   (Gray mouse lemur)   94
Rattus_norvegicus_76_5.0   (Norway rat)   153
Mus_musculus_76_38   (House mouse)   259
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   76
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   116
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   105
Cavia_porcellus_76_3   (Domestic guinea pig)   124
Oryctolagus_cuniculus_76_2   (Rabbit)   133
Ochotona_princeps_76   (American pika)   84
Tupaia_belangeri_76   (Northern tree shrew)   57
Sus_scrofa_76_10.2   (Pig)   133
Bos_taurus_76_3.1   (Cattle)   134
Ovis_aries_76_3.1   (Sheep)   129
Vicugna_pacos_76_1   (Alpaca)   25
Tursiops_truncatus_76_1   (Bottlenose dolphin)   105
Mustela_putorius_furo_76_1.0   (Domestic ferret)   125
Ailuropoda_melanoleuca_76_1   (Giant panda)   138
Canis_familiaris_76_3.1   (Dog)   162
Felis_catus_76_6.2   (Domestic cat)   100
Equus_caballus_76_2   (Horse)   105
Myotis_lucifugus_76_2.0   (Little brown bat)   116
Pteropus_vampyrus_76_1   (Large flying fox)   110
Sorex_araneus_76_1   (European shrew)   45
Erinaceus_europaeus_76   (Western European hedgehog)   58
Procavia_capensis_76_1   (Cape rock hyrax)   87
Loxodonta_africana_76_3   (African savanna elephant)   174
Echinops_telfairi_76   (Small Madagascar hedgehog)   72
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   138
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   40
Macropus_eugenii_76_1.0   (Tammar wallaby)   100
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   123
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   139
Ornithorhynchus_anatinus_76_5   (Platypus)   56
Saccoglossus_kowalevskii_v3.0 139
Petromyzon_marinus_76_7.0   (Sea lamprey)   16
Meleagris_gallopavo_76_2   (Turkey)   51
Gallus_gallus_76_4   (Chicken)   111
Anas_platyrhynchos_76_1.0   (Mallard)   60
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   73
Ficedula_albicollis_76_1.0   (Collared flycatcher)   87
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   138
Anolis_carolinensis_76_2.0   (Green anole)   97
Xenopus_laevis_   (African clawed frog)   447
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   156
Latimeria_chalumnae_76_1   (Coelacanth)   169
Lepisosteus_oculatus_76   (Spotted gar)   164
Gadus_morhua_76_1   (Atlantic cod)   159
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   151
Takifugu_rubripes_76_4   (Torafugu)   326
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   172
Oryzias_latipes_76_1   (Japanese medaka)   155
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   138
Poecilia_formosa_76   (Amazon molly)   169
Oreochromis_niloticus_76_1.0   (Nile tilapia)   210
Astyanax_mexicanus_76   (Mexican tetra)   191
Danio_rerio_76_9   (Zebrafish)   270
Oikopleura_dioica 49
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   49
Ciona_intestinalis_76   (Vase tunicate)   52
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   79
Adineta_vaga 145
Octopus_bimaculoides_280 30
Crassostrea_gigas_22   (Pacific oyster)   74
Lottia_gigantea_   (Owl limpet)   22
Helobdella_robusta_ 22
Capitella_sp._I_ 49
Danaus_plexippus_OGS1.0   (Monarch butterfly)   56
Heliconius_melpomene_   (Postman butterfly)   41
Bombyx_mori_   (Domestic silkworm)   31
Nasonia_vitripennis_   (Jewel wasp)   50
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   22
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   45
Linepithema_humile_v1.1   (Argentine ant)   48
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   43
Solenopsis_invicta_v.2.2.3   (Red fire ant)   33
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   54
Atta_cephalotes_v1.1 45
Camponotus_floridanus_v3.3   (Florida carpenter ant)   46
Lucilia_cuprina   (Australian sheep blowfly)   66
Drosophila_grimshawi_1.3 74
Drosophila_willistoni_1.3 76
Drosophila_pseudoobscura_2.13 76
Drosophila_persimilis_1.3 72
Drosophila_suzukii 44
Drosophila_yakuba_1.3 78
Drosophila_simulans_1.3 67
Drosophila_sechellia_1.3 74
Drosophila_melanogaster_76_5   (Fruit fly)   175
Drosophila_erecta_1.3 76
Drosophila_ananassae_1.3 72
Drosophila_virilis_1.2 78
Drosophila_mojavensis_1.3 74
Megaselia_scalaris_22 9
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   45
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   50
Anopheles_darlingi_22   (American malaria mosquito)   29
Anopheles_gambiae_49_3j   (African malaria mosquito)   40
Tribolium_castaneum_3.0   (Red flour beetle)   73
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   37
Acyrthosiphon_pisum_   (Pea aphid)   45
Rhodnius_prolixus_22 24
Daphnia_pulex_   (Common water flea)   16
Strigamia_maritima_22 72
Sarcoptes_scabiei 16
Tetranychus_urticae_   (Two-spotted spider mite)   62
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   20
Pristionchus_pacificus_ 26
Meloidogyne_incognita_   (Southern root-knot nematode)   47
Meloidogyne_hapla_ 38
Onchocerca_volvulus_22 35
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   46
Caenorhabditis_japonica_ 62
Caenorhabditis_brenneri_ 74
Caenorhabditis_remanei_ 71
Caenorhabditis_elegans_76_235   (Roundworm)   84
Caenorhabditis_briggsae_2 57
Trichinella_spiralis_22 40
Hymenolepis_microstoma_ 48
Echinococcus_multilocularis_ 57
Echinococcus_granulosus_ 53
Taenia_solium_   (Pork tapeworm)   55
Schistosoma_mansoni_ 51
Mnemiopsis_leidyi   (Sea walnut)   42
Thelohanellus_kitauei 32
Acropora_digitifera_v1.0 49
Nematostella_vectensis_1.0   (Starlet sea anemone)   25
Hydra_vulgaris 30
Amphimedon_queenslandica 25
Trichoplax_adhaerens_ 10
Proterospongia_sp._ATCC_50818_ 6
Monosiga_brevicollis_ 9
Sphaeroforma_arctica_JP610_ 5
Capsaspora_owczarzaki_ATCC_30864_ 9
Conidiobolus_coronatus_NRRL28638_v1.0 7
Mortierella_verticillata_NRRL_6337_ 13
Phycomyces_blakesleeanus_ 35
Rhizopus_oryzae_RA_99-880_ 59
Mucor_circinelloides_ 16
Rhizomucor_miehei_CAU432_ 65
Malassezia_globosa_CBS_7966_ 12
Sporisorium_reilianum_22 9
Ustilago_maydis_ 8
Mixia_osmundae_IAM_14324_v1.0 9
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 9
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 31
Melampsora_laricis-populina_ 5
Rhodotorula_graminis_WP1_v1.0 8
Sporobolomyces_roseus_IAM_13481_ 4
Microbotryum_violaceum_22 10
Wallemia_sebi_v1.0 8
Sphaerobolus_stellatus_v1.0 26
Piloderma_croceum_F_1598_v1.0 17
Serpula_lacrymans_var._lacrymans_S7.9_ 11
Coniophora_puteana 10
Hydnomerulius_pinastri_v2.0 15
Paxillus_rubicundulus_Ve08.2h10_v1.0 21
Pisolithus_microcarpus_441_v1.0 10
Pisolithus_tinctorius_Marx_270_v1.0 15
Scleroderma_citrinum_Foug_A_v1.0 10
Coprinopsis_cinerea_okayama7_130_v3 14
Pleurotus_ostreatus_   (Oyster mushroom)   12
Amanita_thiersii_Skay4041_v1.0 8
Amanita_muscaria_Koide_v1.0   (Fly agaric)   11
Galerina_marginata_v1.0 14
Hebeloma_cylindrosporum_h7_v2.0 17
Laccaria_bicolor_S238N-H82_ 13
Agaricus_bisporus_var._bisporus_ 9
Schizophyllum_commune_ 12
Stereum_hirsutum_FP-91666_SS1__v1.0 13
Heterobasidion_annosum_ 10
Gloeophyllum_trabeumv1.0 11
Punctularia_strigosozonata_v1.0 10
Sebacina_vermifera_MAFF_305830_v1.0 11
Fomitiporia_mediterranea_v1.0 14
Tulasnella_calospora_AL13/4D_v1.0 10
Postia_placenta_ 23
Wolfiporia_cocos_MD-104_SS10__v1.0 9
Fomitopsis_pinicolav1.0 17
Fomitopsis_pinicola_FP-58527_SS1_v3.0 15
Phanerochaete_chrysosporium_RP-78_2.1 9
Dichomitus_squalens 11
Trametes_versicolor_v1.0 9
Tremella_mesenterica_   (Witches' butter)   6
Daldinia_eschscholzii_EC12_v1.0 12
Apiospora_montagnei_NRRL_25634_v1.0 10
Magnaporthe_poae_ATCC_64411_22 15
Magnaporthe_grisea_70-15_ 15
Podospora_anserina_ 16
Sporotrichum_thermophile_ATCC_42464_ 13
Thielavia_terrestris_NRRL_8126_ 12
Chaetomium_globosum_CBS_148.51_ 17
Neurospora_tetrasperma_ 12
Neurospora_discreta_FGSC_8579_ 11
Neurospora_crassa_OR74A_ 12
Cryphonectria_parasitica_   (Chestnut blight fungus)   9
Verticillium_albo-atrum_VaMs.102_ 13
Verticillium_dahliae_VdLs.17_ 16
Acremonium_alcalophilumv_1.0 10
Glomerella_graminicola_22 15
Fusarium_graminearum_ 13
Nectria_haematococca_mpVI_ 20
Fusarium_oxysporum_f._sp._lycopersici_4286_ 18
Fusarium_verticillioides_7600_ 15
Trichoderma_asperellum_CBS_433.97_v1.0 12
Trichoderma_atroviride_ 13
Trichoderma_citrinoviride_v1.0 12
Trichoderma_reesei_1.2 11
Trichoderma_virens_Gv29-8_ 13
Trichoderma_longibrachiatum_ATCC_18648_v1.0 14
Trichoderma_harzianum_CBS_226.95_v1.0 12
Amorphotheca_resinae_v1.0   (Creosote fungus)   12
Botrytis_cinerea_B05.10_ 13
Sclerotinia_sclerotiorum_ 16
Blumeria_graminis_22 6
Didymella_exigua_CBS_183.55_v1.0 16
Leptosphaeria_maculans_22 13
Setosphaeria_turcica_v1.0 12
Cochliobolus_miyabeanus_ATCC_44560_v1.0 12
Cochliobolus_victoriae_FI3_v1.0 12
Cochliobolus_carbonum_26-R-13_v1.0 12
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   11
Alternaria_brassicicola_ 12
Cochliobolus_lunatus_m118_v2.0 13
Pyrenophora_teres_f._teres_22 13
Pyrenophora_tritici-repentis_ 11
Stagonospora_nodorum_ 17
Mycosphaerella_graminicola_IPO323_ 12
Zasmidium_cellare_ATCC_36951_v1.0 10
Dothistroma_septosporum 12
Septoria_musiva_v1.0 11
Mycosphaerella_fijiensis_CIRAD86_ 12
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 10
Paracoccidioides_brasiliensis_Pb18_ 12
Coccidioides_posadasii_RMSCC_3488_ 13
Coccidioides_immitis_RS_ 13
Ajellomyces_dermatitidis_SLH14081_ 14
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 14
Microsporum_canis_CBS_113480_ 13
Trichophyton_equinum_CBS_127.97_ 14
Trichophyton_verrucosum_HKI_0517_ 11
Arthroderma_benhamiae_CBS_112371_ 11
Trichophyton_tonsurans_CBS_112818_ 11
Trichophyton_rubrum_CBS_118892_ 12
Uncinocarpus_reesii_1704_ 12
Aspergillus_zonatus_v1.0 14
Penicillium_chrysogenum_Wisconsin_54-1255_ 17
Penicillium_chrysogenum_v1.0 16
Aspergillus_acidus_v1.0 15
Aspergillus_fumigatus_Af293 13
Aspergillus_brasiliensis_v1.0 16
Aspergillus_nidulans_FGSC_A4_ 15
Aspergillus_sydowii_v1.0 13
Aspergillus_versicolor_v1.0 12
Aspergillus_glaucus 12
Aspergillus_carbonarius_ITEM_5010_ 15
Neosartorya_fischeri_NRRL_181_ 12
Aspergillus_terreus_NIH2624_ 12
Aspergillus_tubingensis_v1.0 13
Aspergillus_wentii_v1.0 17
Aspergillus_oryzae_RIB40_ 11
Aspergillus_niger_22 15
Aspergillus_niger_ATCC_1015_ 8
Aspergillus_flavus_NRRL3357_ 10
Aspergillus_clavatus_NRRL_1_ 13
Penicillium_marneffei_ATCC_18224_ 30
Tuber_melanosporum_Mel28_22 9
Tuber_melanosporum_Vittad_   (Perigord truffle)   9
Hansenula_polymorpha_v2.0 8
Dekkera_bruxellensis_CBS_2499_v2.0 5
Pichia_membranifaciensv1.0 8
Candida_tanzawaensis_NRRL_Y-17324__v1.0 6
Candida_dubliniensis_CD36_ 9
Candida_tropicalis_MYA-3404_ 10
Candida_parapsilosis_ 11
Candida_albicans_SC5314 8
Lodderomyces_elongisporus_NRRL_YB-4239_ 10
Babjeviella_inositovora_NRRL_Y-12698_v1.0 8
Pichia_stipitis_CBS_6054_ 10
Candida_guilliermondii_ATCC_6260_ 7
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 7
Debaromyces_hansenii 9
Wickerhamomyces_anomalus 8
Pichia_pastoris_GS115_ 7
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 8
Yarrowia_lipolytica_CLIB122 8
Candida_lusitaniae_ATCC_42720_ 11
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 5
Vanderwaltozyma_polyspora_DSM_70294_ 7
Candida_glabrata_CBS138 9
Kluyveromyces_thermotolerans_CBS_6340 7
Lachancea_kluyveri_ 10
Kluyveromyces_waltii 6
Ashbya_gossypii_ATCC_10895_ 7
Zygosaccharomyces_rouxii_ 8
Saccharomyces_mikatae_MIT 10
Saccharomyces_paradoxus_MIT 12
Saccharomyces_cerevisiae_76   (Baker's yeast)   12
Saccharomyces_bayanus_MIT 10
Kluyveromyces_lactis 7
Schizosaccharomyces_cryophilus_OY26_22 4
Schizosaccharomyces_octosporus_yFS286_ 7
Schizosaccharomyces_japonicus_yFS275_ 6
Schizosaccharomyces_pombe   (Fission yeast)   7
Catenaria_anguillulae_PL171_v1.0 15
Allomyces_macrogynus_ATCC_38327_ 31
Spizellomyces_punctatus_DAOM_BR117_ 17
Dictyostelium_discoideum 23
Dictyostelium_purpureum_ 21
Entamoeba_dispar_1.2 6
Entamoeba_invadens_1.2 7
Entamoeba_histolytica_1 7
Selaginella_moellendorffii_ 37
Pinus_taeda   (Loblolly pine)   109
Picea_abies   (Norway spruce)   74
Eucalyptus_grandis_v201   (Rose gum)   126
Theobroma_cacao_B97-61/B2_v1   (Cacao)   90
Gossypium_raimondii_v221 328
Citrus_clementina_v165 128
Citrus_sinensis_v154   (Sweet orange)   173
Thellungiella_halophila_v173 124
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   191
Capsella_rubella_v183 129
Arabidopsis_lyrata_   (Lyrate rockcress)   107
Arabidopsis_thaliana_10   (Thale cress)   153
Carica_papaya_   (Papaya)   78
Medicago_truncatula_   (Barrel medic)   202
Phaseolus_vulgaris_v186   (French bean)   174
Glycine_max_v109   (Soybean)   256
Cucumis_sativus_v122   (Cucumber)   122
Fragaria_vesca_   (Wild strawberry)   99
Malus_domestica_v196   (Apple)   219
Prunus_persica_v139   (Peach)   92
Linum_usitatissimum_v200   (Flax)   177
Manihot_esculenta_v147   (Cassava)   150
Populus_trichocarpa_v156   (Black cottonwood)   184
Vitis_vinifera_   (Wine grape)   88
Mimulus_guttatus_v140   (Spotted monkey flower)   93
Solanum_lycopersicum_v.2.3   (Tomato)   123
Solanum_tuberosum_   (Potato)   136
Actinidia_chinensis_Hongyang_ 142
Aquilegia_coerulea_v195 120
Triticum_urartu_22 83
Triticum_aestivum_22   (Bread wheat)   196
Aegilops_tauschii_22 100
Brachypodium_distachyon_   (Stiff brome)   114
Oryza_barthii_22   (African wild rice)   121
Oryza_meridionalis_22 132
Oryza_glumaepatula_22 152
Oryza_glaberrima   (African rice)   108
Oryza_punctata_22 162
Oryza_nivara_22 165
Oryza_brachyantha_22   (Malo sina)   99
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   163
Oryza_sativa_v193   (Rice)   164
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   154
Panicum_virgatum_v202   (Switchgrass)   177
Setaria_italica_v164   (Foxtail millet)   133
Zea_mays_subsp._mays_   (Maize)   232
Zea_mays_v181   (Maize)   256
Sorghum_bicolor_   (Sorghum)   129
Musa_balbisiana   (Balbis banana)   233
Musa_acuminata_22   (Wild Malaysian banana)   212
Amborella_trichopoda_22 52
Physcomitrella_patens 78
Coccomyxa_subellipsoidea_sp._C-169_v2 7
Asterochloris_sp._Cgr/DA1pho_v1.0 2
Chlorella_variabilis_sp._NC64A_ 8
Chlorella_vulgaris_ 9
Volvox_carteri_f._nagariensis_ 10
Volvox_carteri_v199 11
Chlamydomonas_reinhardtii_4.0 6
Ostreococcus_sp._RCC809_ 7
Ostreococcus_lucimarinus_CCE9901_ 5
Ostreococcus_tauri_ 6
Bathycoccus_prasinos_ 11
Micromonas_sp._RCC299_ 5
Micromonas_pusilla_CCMP1545_v3.0 10
Cyanidioschyzon_merolae_strain_10D_22 19
Cyanidioschyzon_merolae 19
Porphyridium_purpureum_02_2012 43
Thecamonas_trahens_ATCC_50062_ 10
Bigelowiella_natans_CCMP2755_22 16
Giardia_lamblia_2.3 10
Cyanophora_paradoxa_ 13
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 14
Aureococcus_anophagefferens_ 6
Albugo_laibachii_22 65
Pythium_iwayamai_DAOM_BR242034_22 43
Pythium_arrhenomanes_ATCC_12531_22 42
Pythium_ultimum_v1.7-2 34
Pythium_aphanidermatum_DAOM_BR444_22 29
Pythium_irregulare_DAOM_BR486_22 54
Pythium_vexans_DAOM_BR484_22 33
Phytophthora_ramorum_1.1   (Sudden oak death agent)   49
Phytophthora_sojae_1.1 62
Phytophthora_infestans_T30-4_ 53
Phytophthora_capsici_ 40
Hyaloperonospora_arabidopsidis_22 16
Phaeodactylum_tricornutumCCAP_1055/1 16
Fragilariopsis_cylindrus 21
Thalassiosira_pseudonana_CCMP1335 12
Perkinsus_marinus_ATCC_50983_ 9
Paramecium_tetraurelia_ 80
Tetrahymena_thermophila_SB210_1_ 16
Ichthyophthirius_multifiliis_strain_G5_ 6
Cryptosporidium_hominis 5
Cryptosporidium_muris 4
Cryptosporidium_parvum_Iowa_II 5
Neospora_caninum 4
Toxoplasma_gondii_VEG 4
Toxoplasma_gondii_ME49 4
Toxoplasma_gondii_GT1 4
Babesia_bovis_T2Bo_ 6
Theileria_parva__ 4
Theileria_annulata 3
Plasmodium_falciparum_3D7_ 4
Plasmodium_vivax_SaI-1_7.0 2
Plasmodium_knowlesi_strain_H_ 4
Plasmodium_yoelii_ssp._yoelii_1_ 6
Plasmodium_chabaudi_ 4
Plasmodium_berghei_ANKA_ 5
Symbiodinium_minutum_clade_B1_v1.2 2
Naegleria_gruberi_ 15
Trichomonas_vaginalis_ 111
Guillardia_theta_CCMP2712_v1.0_ 21
Emiliania_huxleyi_CCMP1516_ 48
Leptolyngbya_sp._PCC_7376 42
Acaryochloris_marina_MBIC11017 16
Synechococcus_sp._CC9311 1
Trichodesmium_erythraeum_IMS101 2
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 1
Microcystis_aeruginosa_NIES-843 7
Gloeobacter_violaceus_PCC_7421 1
Calothrix_sp._PCC_7507 3
Anabaena_variabilis_ATCC_29413 1
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 10
Nostoc_sp._PCC_7524 3
Anabaena_sp._90 2
Mycoplasma_mycoides_subsp._capri_LC_str._95010 7
Mycoplasma_hyorhinis_GDL-1 0
Conexibacter_woesei_DSM_14684 1
Eggerthella_lenta_DSM_2243 0
Rubrobacter_xylanophilus_DSM_9941 5
Nakamurella_multipartita_DSM_44233 1
Modestobacter_marinus 3
Blastococcus_saxobsidens_DD2 3
Geodermatophilus_obscurus_DSM_43160 3
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 2
Frankia_symbiont_of_Datisca_glomerata 26
Frankia_sp._EAN1pec 8
Frankia_alni_ACN14a 3
Thermobifida_fusca_YX 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 2
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 4
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 3
Streptomyces_flavogriseus_ATCC_33331 4
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 5
Streptomyces_violaceusniger_Tu_4113 4
Streptomyces_avermitilis_MA-4680 2
Streptomyces_scabiei_87.22 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 3
Actinosynnema_mirum_DSM_43827 2
Saccharomonospora_viridis_DSM_43017 0
Saccharopolyspora_erythraea_NRRL_2338 2
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 1
Microlunatus_phosphovorus_NM-1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 2
Micromonospora_aurantiaca_ATCC_27029 2
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 3
Actinoplanes_missouriensis_431 0
Tsukamurella_paurometabola_DSM_20162 1
Gordonia_sp._KTR9 2
Gordonia_polyisoprenivorans_VH2 1
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 8
Rhodococcus_equi_103S 2
Rhodococcus_opacus_B4 2
Rhodococcus_erythropolis_PR4 1
Nocardia_cyriacigeorgica_GUH-2 2
Nocardia_farcinica_IFM_10152 1
Amycolicicoccus_subflavus_DQS3-9A1 4
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 4
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_avium_104 0
Mycobacterium_vanbaalenii_PYR-1 7
Mycobacterium_canettii_CIPT_140010059 0
Mycobacterium_africanum_GM041182 0
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 0
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_rhodesiae_NBB3 2
Mycobacterium_ulcerans_Agy99 2
Mycobacterium_gilvum_PYR-GCK 5
Mycobacterium_chubuense_NBB4 7
Mycobacterium_marinum_M 2
Mycobacterium_smegmatis_str._MC2_155 2
Corynebacterium_kroppenstedtii_DSM_44385 2
Corynebacterium_efficiens_YS-314 1
Corynebacterium_urealyticum_DSM_7109 0
Corynebacterium_glutamicum_R 0
Corynebacterium_diphtheriae_NCTC_13129 1
Sanguibacter_keddieii_DSM_10542 3
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Jonesia_denitrificans_DSM_20603 2
Intrasporangium_calvum_DSM_43043 1
Xylanimonas_cellulosilytica_DSM_15894 2
Cellulomonas_fimi_ATCC_484 3
Arthrobacter_phenanthrenivorans_Sphe3 8
Arthrobacter_chlorophenolicus_A6 2
Arthrobacter_aurescens_TC1 1
Kocuria_rhizophila_DC2201 1
Rothia_mucilaginosa_DY-18 1
Arthrobacter_sp._Rue61a 0
Renibacterium_salmoninarum_ATCC_33209 0
Micrococcus_luteus_NCTC_2665 0
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_adolescentis_ATCC_15703 1
Actinomyces_sp._F0330 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 4
Herpetosiphon_aurantiacus_DSM_785 0
Deinococcus_gobiensis_I-0 1
Deinococcus_proteolyticus_MRP 1
Meiothermus_ruber_DSM_1279 2
Thermus_scotoductus_SA-01 1
Thermus_thermophilus_HB27 1
Finegoldia_magna_ATCC_29328 1
Symbiobacterium_thermophilum_IAM_14863 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Clostridium_cellulolyticum_H10 1
Thermaerobacter_marianensis_DSM_12885 1
Sulfobacillus_acidophilus_DSM_10332 1
Oscillibacter_valericigenes_Sjm18-20 1
Desulfosporosinus_orientis_DSM_765 1
Syntrophobotulus_glycolicus_DSM_8271 0
Desulfitobacterium_hafniense_Y51 2
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 1
Eubacterium_limosum_KIST612 1
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 0
Clostridium_lentocellum_DSM_5427 1
Eubacterium_rectale_ATCC_33656 1
Butyrivibrio_fibrisolvens 1
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1
Clostridium_sp._BNL1100 2
Clostridium_tetani_E88 1
Clostridium_cellulovorans_743B 1
Enterococcus_sp._7L76 1
Enterococcus_faecium_Aus0004 6
Enterococcus_faecalis_62 1
Lactobacillus_casei_ATCC_334 0
Lactobacillus_fermentum_IFO_3956 1
Lactobacillus_plantarum_JDM1 1
Lactobacillus_acidophilus_30SC 0
Streptococcus_sp._I-P16 5
Streptococcus_sp._I-G2 4
Streptococcus_gallolyticus_UCN34 6
Streptococcus_pseudopneumoniae_IS7493 1
Streptococcus_infantarius_subsp._infantarius_CJ18 6
Streptococcus_pneumoniae_P1031 1
Streptococcus_agalactiae_A909 2
Streptococcus_mutans_NN2025 1
Streptococcus_thermophilus_LMD-9 12
Streptococcus_sanguinis_SK36 2
Streptococcus_salivarius_57.I 8
Streptococcus_oralis_Uo5 1
Streptococcus_gordonii_str._Challis_substr._CH1 1
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_polymyxa_M1 0
Listeria_welshimeri_serovar_6b_str._SLCC5334 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 2
Lysinibacillus_sphaericus_C3-41 1
Anoxybacillus_flavithermus_WK1 2
Halobacillus_halophilus_DSM_2266 0
Bacillus_sp._JS 0
Bacillus_amyloliquefaciens_FZB42 0
Bacillus_atrophaeus_1942 1
Bacillus_subtilis_subsp._subtilis_str._168 0
Bacillus_halodurans_C-125 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_thuringiensis_str._Al_Hakam 2
Bacillus_cereus_03BB102 1
Bacillus_anthracis_str._A0248 1
Bacillus_coagulans_2-6 1
Staphylococcus_pseudintermedius_HKU10-03 1
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 3
Staphylococcus_lugdunensis_HKU09-01 1
Staphylococcus_haemolyticus_JCSC1435 2
Staphylococcus_epidermidis_RP62A 3
Staphylococcus_carnosus_subsp._carnosus_TM300 2
Staphylococcus_aureus_subsp._aureus_JH1 2
Staphylococcus_aureus 2
Gemmatimonas_aurantiaca_T-27 2
Pelodictyon_phaeoclathratiforme_BU-1 3
Chlorobium_phaeobacteroides_DSM_266 1
Prosthecochloris_aestuarii_DSM_271 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 4
Cyclobacterium_marinum_DSM_745 0
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 1
Odoribacter_splanchnicus_DSM_20712 1
Alistipes_finegoldii_DSM_17242 1
Solitalea_canadensis_DSM_3403 0
Sphingobacterium_sp._21 1
Maribacter_sp._HTCC2170 0
Robiginitalea_biformata_HTCC2501 0
Aequorivita_sublithincola_DSM_14238 0
Zobellia_galactanivorans 0
Muricauda_ruestringensis_DSM_13258 1
Capnocytophaga_canimorsus_Cc5 1
Phycisphaera_mikurensis_NBRC_102666 1
Turneriella_parva_DSM_21527 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Spirochaeta_smaragdinae_DSM_11293 0
Sphaerochaeta_pleomorpha_str._Grapes 1
Sphaerochaeta_globus_str._Buddy 0
Spirochaeta_caldaria_DSM_7334 0
Treponema_azotonutricium_ZAS-9 0
Treponema_primitia_ZAS-2 0
Treponema_brennaborense_DSM_12168 2
Treponema_succinifaciens_DSM_2489 0
Spirochaeta_africana_DSM_8902 0
Spirochaeta_thermophila_DSM_6192 0
Thermodesulfobacterium_sp._OPB45 1
Desulfurispirillum_indicum_S5 1
Marinitoga_piezophila_KA3 0
Petrotoga_mobilis_SJ95 1
Mesotoga_prima_MesG1.Ag.4.2 0
Fervidobacterium_pennivorans_DSM_9078 0
Fervidobacterium_nodosum_Rt17-B1 0
Thermotoga_lettingae_TMO 0
Sulfurihydrogenibium_sp._YO3AOP1 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 0
Terriglobus_saanensis_SP1PR4 1
Acidobacterium_capsulatum_ATCC_51196 1
Ilyobacter_polytropus_DSM_2926 0
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 0
Bdellovibrio_bacteriovorus_HD100 1
Sulfurovum_sp._NBC37-1 1
Syntrophus_aciditrophicus_SB 3
Desulfomonile_tiedjei_DSM_6799 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfococcus_oleovorans_Hxd3 0
Desulfovibrio_aespoeensis_Aspo-2 1
Pelobacter_carbinolicus_DSM_2380 0
Anaeromyxobacter_sp._Fw109-5 1
Myxococcus_fulvus_HW-1 3
Dechloromonas_aromatica_RCB 1
Azoarcus_sp._KH32C 2
Azoarcus_sp._BH72 1
Laribacter_hongkongensis_HLHK9 0
Chromobacterium_violaceum_ATCC_12472 1
Neisseria_lactamica_020-06 1
Methylibium_petroleiphilum_PM1 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_phymatum_STM815 0
Burkholderia_xenovorans_LB400 5
Ralstonia_eutropha_JMP134 2
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 3
Ralstonia_eutropha_H16 3
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 5
Burkholderia_pseudomallei_1106a 3
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 4
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 3
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 1
Verminephrobacter_eiseniae_EF01-2 2
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_sp._JS666 0
Polaromonas_naphthalenivorans_CJ2 6
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_sp._JS42 4
Comamonas_testosteroni_CNB-2 0
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 2
Janthinobacterium_sp._Marseille 1
Herbaspirillum_seropedicae_SmR1 1
Pusillimonas_sp._T7-7 0
Bordetella_petrii_DSM_12804 2
Bordetella_pertussis_Tohama_I 1
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 3
Methylotenera_mobilis_JLW8 1
Methylobacillus_flagellatus_KT 1
Asticcacaulis_excentricus_CB_48 0
Caulobacter_sp._K31 2
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Novosphingobium_sp._PP1Y 0
Novosphingobium_aromaticivorans_DSM_12444 2
Sphingobium_sp._SYK-6 0
Sphingobium_japonicum_UT26S 2
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 0
Sphingomonas_wittichii_RW1 8
Hirschia_baltica_ATCC_49814 0
Hyphomonas_neptunium_ATCC_15444 1
Phaeobacter_gallaeciensis_2.10 1
Rhodobacter_sphaeroides_ATCC_17029 1
Tistrella_mobilis_KA081020-065 1
Rhodospirillum_centenum_SW 2
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 7
Gluconacetobacter_diazotrophicus_PAl_5 2
Acidiphilium_multivorum_AIU301 0
Acidiphilium_cryptum_JF-5 0
Polymorphum_gilvum_SL003B-26A1 0
Starkeya_novella_DSM_506 1
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 3
Methylobacterium_radiotolerans_JCM_2831 1
Parvibaculum_lavamentivorans_DS-1 0
Ochrobactrum_anthropi_ATCC_49188 2
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 3
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Brucella_melitensis_ATCC_23457 1
Brucella_ovis_ATCC_25840 2
Brucella_abortus_S19 2
Sinorhizobium_fredii_NGR234 5
Sinorhizobium_meliloti_AK83 5
Rhizobium_etli_CIAT_652 2
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 5
Agrobacterium_vitis_S4 2
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 1
Pelagibacterium_halotolerans_B2 2
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_hamburgensis_X14 11
Bradyrhizobium_japonicum_USDA_110 2
Bradyrhizobium_sp._ORS_278 3
Vibrio_sp._Ex25 2
Vibrio_parahaemolyticus_RIMD_2210633 2
Vibrio_vulnificus_MO6-24/O 1
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 1
Shewanella_denitrificans_OS217 1
Shewanella_woodyi_ATCC_51908 1
Colwellia_psychrerythraea_34H 2
Glaciecola_sp._4H-3-7+YE-5 1
Marinobacter_adhaerens_HP15 3
Marinobacter_sp._BSs20148 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Marinobacter_aquaeolei_VT8 1
Hahella_chejuensis_KCTC_2396 2
Alcanivorax_borkumensis_SK2 1
Marinomonas_sp._MWYL1 3
Marinomonas_mediterranea_MMB-1 1
Methylomonas_methanica_MC09 1
Methylococcus_capsulatus_str._Bath 1
Frateuria_aurantia_DSM_6220 2
Pseudoxanthomonas_spadix_BD-a59 2
Stenotrophomonas_maltophilia_K279a 2
Xylella_fastidiosa_M23 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Alkalilimnicola_ehrlichii_MLHE-1 0
Allochromatium_vinosum_DSM_180 0
Thiocystis_violascens_DSM_198 3
gamma_proteobacterium_HdN1 1
Xenorhabdus_bovienii_SS-2004 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Serratia_sp._ATCC_39006 2
Dickeya_dadantii_Ech703 1
Dickeya_zeae_Ech1591 2
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Pantoea_sp._At-9b 0
Escherichia_blattae_DSM_4481 1
Cronobacter_sakazakii_ES15 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 2
Shigella_dysenteriae_Sd197 1
Shigella_boydii_CDC_3083-94 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Klebsiella_oxytoca_E718 2
Klebsiella_variicola_At-22 2
Klebsiella_pneumoniae_NTUH-K2044 2
Escherichia_fergusonii_ATCC_35469 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Citrobacter_rodentium_ICC168 24
Citrobacter_koseri_ATCC_BAA-895 1
Azotobacter_vinelandii_DJ 10
Pseudomonas_sp._TKP 1
Pseudomonas_sp._UW4 1
Pseudomonas_entomophila_L48 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_putida_F1 2
Pseudomonas_protegens_Pf-5 2
Pseudomonas_fluorescens_SBW25 2
Pseudomonas_aeruginosa_UCBPP-PA14 2
Pseudomonas_sp._VLB120 3
Psychrobacter_sp._PRwf-1 1
Psychrobacter_arcticus_273-4 1
Ignicoccus_hospitalis_KIN4/I 1
Sulfolobus_tokodaii_str._7 5
Sulfolobus_islandicus_Y.N.15.51 14
Sulfolobus_acidocaldarius_DSM_639 1
Methanosaeta_concilii_GP6 1
Methanohalobium_evestigatum_Z-7303 2
Methanosarcina_acetivorans_C2A 1
Methanosarcina_mazei_Go1 5
Methanosarcina_barkeri_str._Fusaro 1
Methanohalophilus_mahii_DSM_5219 1
Methanoculleus_bourgensis_MS2 1
Methanotorris_igneus_Kol_5 1
Methanocaldococcus_fervens_AG86 2
Methanocaldococcus_jannaschii_DSM_2661 1
Methanothermococcus_okinawensis_IH1 1
Methanococcus_aeolicus_Nankai-3 1
Methanococcus_maripaludis_C5 1
Methanobrevibacter_sp._AbM4 5

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   280
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   147
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   58
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   38
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   74
Cryptococcus_neoformans_var._grubii_H99_ 7
Cryptococcus_neoformans_B-3501A_ 9
Cryptococcus_neoformans_JEC21_ 9
Paracoccidioides_brasiliensis_Pb01_ 13
Paracoccidioides_brasiliensis_Pb03_ 13
Coccidioides_posadasii_str._Silveira_ 14
Coccidioides_immitis_RMSCC_3703_ 12
Coccidioides_immitis_RMSCC_2394_ 10
Coccidioides_immitis_H538.4_ 13
Ajellomyces_dermatitidis_ER-3_ 15
Histoplasma_capsulatum_H143 13
Histoplasma_capsulatum_H88 14
Histoplasma_capsulatum_G186AR 14
Aspergillus_fumigatus_A1163_ 13
Candida_albicans_WO-1_ 8
Saccharomyces_cerevisiae_UC5 12
Saccharomyces_cerevisiae_PW5 9
Saccharomyces_cerevisiae_FL100 2
Saccharomyces_cerevisiae_CLIB382 1
Saccharomyces_cerevisiae_CLIB324 4
Saccharomyces_cerevisiae_CBS7960 11
Saccharomyces_cerevisiae_YJM269 10
Saccharomyces_cerevisiae_T7 12
Saccharomyces_cerevisiae_FostersB 11
Saccharomyces_cerevisiae_FostersO 6
Saccharomyces_cerevisiae_VL3 9
Saccharomyces_cerevisiae_Vin13 10
Saccharomyces_cerevisiae_LalvinQA23 12
Saccharomyces_cerevisiae_AWRI796 8
Saccharomyces_cerevisiae_Sigma1278b 12
Saccharomyces_cerevisiae_W303 12
Saccharomyces_cerevisiae_JAY291 12
Saccharomyces_cerevisiae_AWRI1631 7
Saccharomyces_cerevisiae_YPS163 5
Saccharomyces_cerevisiae_M22 4
Saccharomyces_cerevisiae_T73 3
Saccharomyces_cerevisiae_CLIB215 5
Saccharomyces_cerevisiae_Y10 3
Saccharomyces_cerevisiae_YJM789_ 12
Saccharomyces_cerevisiae_YJM789 12
Saccharomyces_cerevisiae_RM11-1a 12
Saccharomyces_cerevisiae_RM11-1a_ 12
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   12
Schizosaccharomyces_pombe_972h-_ 7
Batrachochytrium_dendrobatidis_JEL423_ 9
Batrachochytrium_dendrobatidis_JAM81_ 7
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   94
Hordeum_vulgare_22   (Domesticated barley)   135
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   143
Trypanosoma_brucei_Lister_427_v4.1 1
Neospora_caninum_Nc-Liverpool_6.2 4
Plasmodium_falciparum_HB3_ 4
Plasmodium_falciparum_Dd2_ 3
Chroococcidiopsis_thermalis_PCC_7203 2
Chamaesiphon_minutus_PCC_6605 7
Cyanobium_gracile_PCC_6307 2
Synechococcus_sp._PCC_7002 1
Oscillatoria_nigro-viridis_PCC_7112 2
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 3
Cyanothece_sp._PCC_7822 2
Cyanothece_sp._PCC_7424 6
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 2
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Stanieria_cyanosphaera_PCC_7437 3
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 2
Anabaena_cylindrica_PCC_7122 2
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 2
Mycoplasma_fermentans_PG18 1
Mycoplasma_hyorhinis_SK76 3
Mycoplasma_hyorhinis_MCLD 1
Mycoplasma_hyorhinis_HUB-1 4
Mycoplasma_hyorhinis_DBS_1050 2
Frankia_sp._EuI1c 5
Frankia_sp._CcI3 3
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Saccharothrix_espanaensis_DSM_44229 11
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 3
Propionibacterium_avidum_44067 1
Propionibacterium_acidipropionici_ATCC_4875 1
Actinoplanes_friuliensis_DSM_7358 3
Rhodococcus_pyridinivorans_SB3094 3
Rhodococcus_erythropolis_CCM2595 2
Nocardia_brasiliensis_ATCC_700358 5
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_sp._JDM601 0
Mycobacterium_abscessus_subsp._bolletii_50594 4
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 4
Mycobacterium_sp._MCS 3
Mycobacterium_yongonense_05-1390 3
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 2
Mycobacterium_canettii_CIPT_140070017 0
Mycobacterium_canettii_CIPT_140060008 0
Mycobacterium_canettii_CIPT_140070008 0
Mycobacterium_canettii_CIPT_140070010 0
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_EAI5 0
Mycobacterium_tuberculosis_str._Beijing/NITR203 0
Mycobacterium_tuberculosis_UT205 0
Mycobacterium_tuberculosis_RGTB327 0
Mycobacterium_tuberculosis_CTRI-2 0
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_tuberculosis_CDC1551 3
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 2
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_gilvum_Spyr1 2
Mycobacterium_smegmatis_str._MC2_155 2
Mycobacterium_kansasii_ATCC_12478 2
Corynebacterium_maris_DSM_45190 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1
Corynebacterium_argentoratense_DSM_44202 1
Corynebacterium_pseudotuberculosis_1002 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_diphtheriae_BH8 2
Corynebacterium_diphtheriae_INCA_402 1
Corynebacterium_diphtheriae_VA01 1
Corynebacterium_diphtheriae_HC04 1
Corynebacterium_diphtheriae_HC03 1
Corynebacterium_diphtheriae_HC02 1
Corynebacterium_diphtheriae_HC01 1
Corynebacterium_diphtheriae_241 1
Corynebacterium_diphtheriae_CDCE_8392 2
Corynebacterium_diphtheriae_PW8 1
Corynebacterium_diphtheriae_C7_(beta) 2
Corynebacterium_diphtheriae_31A 2
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_longum_NCC2705 2
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_F8 2
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 0
Bifidobacterium_breve_UCC2003 1
Actinomyces_viscosus_C505 2
Deinococcus_peraridilitoris_DSM_19664 2
Thermus_oshimai_JL-2 1
Thermus_thermophilus_JL-18 4
Eubacterium_siraeum_V10Sc8a 2
Faecalibacterium_prausnitzii_L2-6 1
Sulfobacillus_acidophilus_TPY 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1
Clostridium_sp._SY8519 0
Clostridium_kluyveri_NBRC_12016 1
Clostridium_tetani_genome_12124569 1
Clostridium_pasteurianum_BC1 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Carnobacterium_maltaromaticum_LMA28 1
Enterococcus_faecium_Aus0085 4
Enterococcus_faecium_NRRL_B-2354 0
Enterococcus_faecium_DO 9
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_amylovorus_GRL_1112 0
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_plantarum_subsp._plantarum_P-8 2
Lactobacillus_plantarum_WCFS1 1
Lactobacillus_helveticus_H10 0
Streptococcus_anginosus_C238 9
Streptococcus_anginosus_C1051 3
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 7
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 4
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1
Streptococcus_pyogenes_NZ131 1
Streptococcus_pneumoniae_A026 1
Streptococcus_pneumoniae_ST556 2
Streptococcus_pneumoniae_SPNA45 1
Streptococcus_pneumoniae_SPN994039 2
Streptococcus_pneumoniae_SPN994038 2
Streptococcus_pneumoniae_SPN034183 2
Streptococcus_pneumoniae_SPN034156 1
Streptococcus_pneumoniae_INV104 2
Streptococcus_pneumoniae_INV200 2
Streptococcus_pneumoniae_OXC141 2
Streptococcus_pneumoniae_gamPNI0373 1
Streptococcus_pneumoniae_AP200 1
Streptococcus_pneumoniae_ATCC_700669 3
Streptococcus_pneumoniae_TCH8431/19A 2
Streptococcus_pneumoniae_CGSP14 3
Streptococcus_pneumoniae_G54 2
Streptococcus_pneumoniae_JJA 2
Streptococcus_pneumoniae_70585 2
Streptococcus_pneumoniae_Hungary19A-6 2
Streptococcus_pneumoniae_Taiwan19F-14 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_670-6B 3
Streptococcus_pneumoniae_R6 1
Streptococcus_pneumoniae_TIGR4 1
Streptococcus_agalactiae_GD201008-001 2
Streptococcus_agalactiae_2603V/R 2
Streptococcus_mutans_UA159 1
Streptococcus_thermophilus_MN-ZLW-002 4
Streptococcus_thermophilus_JIM_8232 6
Streptococcus_thermophilus_ND03 4
Streptococcus_thermophilus_CNRZ1066 4
Streptococcus_thermophilus_LMG_18311 6
Streptococcus_suis_TL13 4
Streptococcus_suis_ST3 3
Streptococcus_suis_D9 3
Streptococcus_suis_D12 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_98HAH33 1
Streptococcus_salivarius_CCHSS3 11
Streptococcus_salivarius_JIM8777 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Listeria_monocytogenes_EGD_sequence 1
Listeria_monocytogenes_La111 1
Listeria_monocytogenes_serotype_4b_str._LL195 1
Listeria_monocytogenes_07PF0776 1
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC2376 1
Listeria_monocytogenes_SLCC5850 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_L312 1
Listeria_monocytogenes_SLCC2479 1
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_SLCC2378 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1
Listeria_monocytogenes_08-5578 1
Listeria_monocytogenes_08-5923 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_10403S 1
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_Finland_1998 1
Listeria_monocytogenes_FSL_R2-561 1
Listeria_monocytogenes_serotype_4b_str._F2365 1
Listeria_monocytogenes_EGD-e 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 0
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 0
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 0
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 0
Bacillus_amyloliquefaciens_LFB112 0
Bacillus_amyloliquefaciens_CC178 0
Bacillus_amyloliquefaciens_Y2 0
Bacillus_amyloliquefaciens_IT-45 0
Bacillus_amyloliquefaciens_XH7 0
Bacillus_amyloliquefaciens_LL3 0
Bacillus_amyloliquefaciens_TA208 0
Bacillus_amyloliquefaciens_DSM_7 0
Bacillus_subtilis_PY79 0
Bacillus_subtilis_XF-1 0
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 0
Bacillus_subtilis_subsp._subtilis_str._BSP1 0
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 0
Bacillus_subtilis_subsp._subtilis_6051-HGW 0
Bacillus_subtilis_subsp._spizizenii_TU-B-10 0
Bacillus_subtilis_subsp._spizizenii_str._W23 0
Bacillus_thuringiensis_HD-771 1
Bacillus_thuringiensis_HD-789 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 1
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 1
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_AH820 1
Bacillus_cereus_AH187 1
Bacillus_cereus_G9842 1
Bacillus_cereus_Q1 1
Bacillus_cereus_F837/76 1
Bacillus_cereus_NC7401 1
Bacillus_cereus_E33L 2
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 2
Staphylococcus_pseudintermedius_ED99 1
Staphylococcus_pasteuri_SP1 2
Staphylococcus_lugdunensis_N920143 2
Staphylococcus_warneri_SG1 2
Staphylococcus_epidermidis_ATCC_12228 3
Staphylococcus_aureus_CA-347 2
Staphylococcus_aureus_Bmb9393 2
Staphylococcus_aureus_M1 2
Staphylococcus_aureus_08BA02176 2
Staphylococcus_aureus_ST228/18412 2
Staphylococcus_aureus_ST228/18341 2
Staphylococcus_aureus_ST228/16125 2
Staphylococcus_aureus_ST228/16035 2
Staphylococcus_aureus_ST228/15532 2
Staphylococcus_aureus_ST228/10497 2
Staphylococcus_aureus_ST228/10388 2
Staphylococcus_aureus_04-02981 2
Staphylococcus_aureus_RF122 2
Staphylococcus_aureus_subsp._aureus_Z172 2
Staphylococcus_aureus_subsp._aureus_6850 2
Staphylococcus_aureus_subsp._aureus_SA957 2
Staphylococcus_aureus_subsp._aureus_CN1 2
Staphylococcus_aureus_subsp._aureus_SA40 2
Staphylococcus_aureus_subsp._aureus_11819-97 2
Staphylococcus_aureus_subsp._aureus_M013 2
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 2
Staphylococcus_aureus_subsp._aureus_VC40 2
Staphylococcus_aureus_subsp._aureus_T0131 2
Staphylococcus_aureus_subsp._aureus_LGA251 2
Staphylococcus_aureus_subsp._aureus_ECT-R_2 2
Staphylococcus_aureus_subsp._aureus_JKD6159 2
Staphylococcus_aureus_subsp._aureus_ED133 2
Staphylococcus_aureus_subsp._aureus_ED98 2
Staphylococcus_aureus_subsp._aureus_TW20 2
Staphylococcus_aureus_subsp._aureus_55/2053 1
Staphylococcus_aureus_subsp._aureus_TCH60 2
Staphylococcus_aureus_subsp._aureus_str._JKD6008 2
Staphylococcus_aureus_subsp._aureus_71193 2
Staphylococcus_aureus_subsp._aureus_S0385 1
Staphylococcus_aureus_subsp._aureus_str._Newman 2
Staphylococcus_aureus_subsp._aureus_Mu3 2
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 2
Staphylococcus_aureus_subsp._aureus_JH9 2
Staphylococcus_aureus_subsp._aureus_MSSA476 2
Staphylococcus_aureus_subsp._aureus_MRSA252 1
Staphylococcus_aureus_subsp._aureus_MW2 2
Staphylococcus_aureus_subsp._aureus_N315 2
Staphylococcus_aureus_subsp._aureus_Mu50 2
Staphylococcus_aureus_subsp._aureus_COL 2
Staphylococcus_aureus_subsp._aureus_NCTC_8325 2
Chlorobium_phaeobacteroides_BS1 1
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 0
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Spirochaeta_thermophila_DSM_6578 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 3
Neisseria_meningitidis_alpha710 1
Burkholderia_phenoliruptrix_BR3459a 2
Pandoraea_pnomenusa_3kgm 0
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_CMR15 1
Burkholderia_sp._CCGE1003 2
Burkholderia_sp._CCGE1001 3
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 2
Burkholderia_pseudomallei_MSHR305 3
Burkholderia_pseudomallei_NCTC_13179 3
Burkholderia_pseudomallei_BPC006 3
Burkholderia_pseudomallei_1026b 3
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 3
Burkholderia_pseudomallei_1710b 4
Burkholderia_pseudomallei_K96243 3
Burkholderia_mallei_NCTC_10229 2
Burkholderia_mallei_NCTC_10247 2
Burkholderia_mallei_ATCC_23344 3
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 6
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 3
Variovorax_paradoxus_B4 2
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 3
Caulobacter_crescentus_CB15 1
Octadecabacter_arcticus_238 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Gluconacetobacter_diazotrophicus_PAl_5 2
Methylobacterium_extorquens_DM4 2
Methylobacterium_extorquens_PA1 1
Brucella_ceti_TE10759-12 2
Brucella_ceti_TE28753-12 2
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_melitensis_NI 3
Brucella_melitensis_M5-90 3
Brucella_melitensis_M28 2
Brucella_melitensis_bv._1_str._16M 3
Brucella_abortus_A13334 2
Brucella_melitensis_biovar_Abortus_2308 2
Brucella_abortus_bv._1_str._9-941 2
Sinorhizobium_fredii_USDA_257 2
Sinorhizobium_fredii_HH103 3
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 2
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 4
Rhizobium_tropici_CIAT_899 7
Rhizobium_leguminosarum_bv._trifolii_WSM1325 3
Hyphomicrobium_nitrativorans_NL23 1
Hyphomicrobium_denitrificans_1NES1 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 2
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 2
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 4
Bradyrhizobium_sp._BTAi1 5
Bradyrhizobium_oligotrophicum_S58 2
Bradyrhizobium_japonicum_USDA_6 3
Vibrio_parahaemolyticus_BB22OP 2
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_vulnificus_CMCP6 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alcanivorax_dieselolei_B5 1
Thalassolituus_oleivorans_MIL-1 2
Stenotrophomonas_maltophilia_D457 2
Stenotrophomonas_maltophilia_JV3 3
Stenotrophomonas_maltophilia_R551-3 3
Xylella_fastidiosa_subsp._fastidiosa_GB514 1
Xylella_fastidiosa_M12 1
Xylella_fastidiosa_Temecula1 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 3
Xanthomonas_axonopodis_pv._citrumelo_F1 2
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 0
Morganella_morganii_subsp._morganii_KT 1
Dickeya_dadantii_Ech586 1
Dickeya_dadantii_3937 3
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Cronobacter_sakazakii_CMCC_45402 1
Raoultella_ornithinolytica_B6 1
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 2
Shigella_flexneri_2a_str._2457T 1
Shigella_dysenteriae_1617 2
Shigella_boydii_Sb227 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 4
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Klebsiella_oxytoca_KCTC_1686 3
Klebsiella_pneumoniae_JM45 2
Klebsiella_pneumoniae_CG43 2
Klebsiella_pneumoniae_KCTC_2242 2
Klebsiella_pneumoniae_342 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 2
Escherichia_coli_E24377A 6
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 2
Escherichia_coli_O104:H4_str._2009EL-2071 2
Escherichia_coli_O104:H4_str._2011C-3493 2
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 1
Escherichia_coli_042 2
Escherichia_coli_Xuzhou21 2
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 4
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 1
Escherichia_coli_ED1a 2
Escherichia_coli_IAI39 1
Escherichia_coli_UMN026 1
Escherichia_coli_55989 1
Escherichia_coli_S88 1
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 2
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 2
Escherichia_coli_SE15 1
Escherichia_coli_SE11 2
Escherichia_coli_APEC_O1 1
Escherichia_coli_O103:H2_str._12009 2
Escherichia_coli_UTI89 1
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 17
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 10
Escherichia_coli_CFT073 2
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 2
Escherichia_coli_O157:H7_str._EC4115 2
Escherichia_coli_O157:H7_str._Sakai 2
Escherichia_coli_O157:H7_str._EDL933 2
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 3
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1
Azotobacter_vinelandii_CA6 10
Azotobacter_vinelandii_CA 10
Pseudomonas_denitrificans_ATCC_13867 3
Pseudomonas_monteilii_SB3101 2
Pseudomonas_monteilii_SB3078 2
Pseudomonas_putida_H8234 3
Pseudomonas_putida_HB3267 2
Pseudomonas_putida_NBRC_14164 4
Pseudomonas_putida_DOT-T1E 2
Pseudomonas_putida_S16 2
Pseudomonas_putida_BIRD-1 2
Pseudomonas_putida_W619 4
Pseudomonas_putida_ND6 3
Pseudomonas_putida_KT2440 2
Pseudomonas_putida_GB-1 2
Pseudomonas_protegens_CHA0 3
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 2
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 2
Pseudomonas_resinovorans_NBRC_106553 5
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_radioresistens__SH164 2
Sulfolobus_islandicus_LAL14/1 1
Sulfolobus_islandicus_HVE10/4 1
Sulfolobus_islandicus_Y.G.57.14 14
Sulfolobus_islandicus_L.S.2.15 1
Sulfolobus_islandicus_M.16.27 1
Sulfolobus_islandicus_L.D.8.5 2
Sulfolobus_acidocaldarius_Ron12/I 1
Sulfolobus_acidocaldarius_N8 1
Methanomethylovorans_hollandica_DSM_15978 3
Methanosarcina_mazei_Tuc01 2
Methanococcus_maripaludis_X1 1
Methanococcus_maripaludis_C6 1
Methanococcus_maripaludis_C7 1
Methanococcus_maripaludis_S2 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   159
Pan_troglodytes_69_2.1.4   (Chimpanzee)   129
Gorilla_gorilla_69_3.1   (Western gorilla)   132
Pongo_abelii_69_2   (Sumatran orangutan)   118
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   110
Macaca_mulatta_69_1   (Rhesus monkey)   132
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   133
Otolemur_garnettii_69_3   (Small-eared galago)   131
Microcebus_murinus_69_1   (Gray mouse lemur)   94
Rattus_norvegicus_69_3.4   (Norway rat)   136
Mus_musculus_69_38   (House mouse)   150
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   76
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   114
Cavia_porcellus_69_3   (Domestic guinea pig)   118
Oryctolagus_cuniculus_69_2   (Rabbit)   112
Ochotona_princeps_69   (American pika)   84
Tupaia_belangeri_69   (Northern tree shrew)   57
Sus_scrofa_69_10.2   (Pig)   123
Bos_taurus_69_3.1   (Cattle)   127
Vicugna_pacos_69_1   (Alpaca)   25
Tursiops_truncatus_69_1   (Bottlenose dolphin)   105
Mustela_putorius_furo_69_1.0   (Domestic ferret)   123
Ailuropoda_melanoleuca_69_1   (Giant panda)   125
Canis_familiaris_69_3.1   (Dog)   139
Felis_catus_69   (Domestic cat)   64
Equus_caballus_69_2   (Horse)   101
Myotis_lucifugus_69_2.0   (Little brown bat)   111
Pteropus_vampyrus_69_1   (Large flying fox)   110
Sorex_araneus_69_1   (European shrew)   45
Erinaceus_europaeus_69   (Western European hedgehog)   58
Procavia_capensis_69_1   (Cape rock hyrax)   87
Loxodonta_africana_69_3   (African savanna elephant)   117
Echinops_telfairi_69   (Small Madagascar hedgehog)   72
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   54
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   40
Macropus_eugenii_69_1.0   (Tammar wallaby)   100
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   110
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   131
Ornithorhynchus_anatinus_69_5   (Platypus)   52
Petromyzon_marinus_69_7.0   (Sea lamprey)   15
Meleagris_gallopavo_69_2   (Turkey)   43
Gallus_gallus_69_2   (Chicken)   77
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   71
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   124
Anolis_carolinensis_69_2.0   (Green anole)   79
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   133
Latimeria_chalumnae_69_1   (Coelacanth)   153
Gadus_morhua_69_1   (Atlantic cod)   148
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   136
Takifugu_rubripes_69_4   (Torafugu)   161
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   148
Oryzias_latipes_69_1   (Japanese medaka)   130
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   137
Oreochromis_niloticus_69_1.0   (Nile tilapia)   187
Danio_rerio_69_9   (Zebrafish)   198
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   45
Ciona_intestinalis_69   (Vase tunicate)   48
Drosophila_melanogaster_69_5   (Fruit fly)   77
Caenorhabditis_elegans_69_215   (Roundworm)   59
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   12
Arabidopsis_thaliana_10   (Thale cress)   115

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   342
Homo_sapiens__(NCBI_version)   (Human)   190
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   151
Loa_loa_v3.3_(Request)   (Eye worm)   26
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   18
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   26
Moniliophthora_perniciosa_FA553__(Genome_survey) 1
Encephalitozoon_intestinalis__(endoparasite) 3
Encephalitozoon_cuniculi_(endoparasite) 3
Picea_sitchensis__(Incomplete)   (Sitka spruce)   12
Lotus_japonicus__(Early_assembly) 56
Malus_x_domestica_(Duplicate)   (Apple)   220
Ricinus_communis__(Early_assembly)   (Castor bean)   80
Nicotiana_benthamiana_0.4.4_(Early_draft) 179
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   121
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   123
Phoenix_dactylifera__(Early_draft)   (Date palm)   48
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
NCBI_plasmid_sequences_(Plasmids) 126
TargetDB__(Targets) 171
Protozoadb_2010_08_(Protozoadb) 349
PDB_chains_(SCOP_1.75)_(PDB) 1
STRING_v9.0.5_(STRING) 6854
Uniprot_2018_03_genome 357920
NCBI_2017_08_genome 158360
NCBI_viral_sequences_(Viral) 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3
Protein_Data_Bank_(all_PDB_sequenc) 12

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]