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Domain combinations for _gap_,47353,57756,_gap_,53098,56672 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47353 - Retrovirus capsid dimerization domain-like
57756 - Retrovirus zinc finger-like domains
53098 - Ribonuclease H-like
56672 - DNA/RNA polymerases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Takifugu_rubripes_76_4   (Torafugu)   2
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   9

Longest transcript per gene
Genome     Number
Takifugu_rubripes_69_4   (Torafugu)   2
Ciona_intestinalis_69   (Vase tunicate)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 7
NCBI_2017_08_genome 19
Uniprot_2018_03_genome 680

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