SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47895,52540 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   29
Pan_troglodytes_76_2.1.4   (Chimpanzee)   17
Gorilla_gorilla_76_3.1   (Western gorilla)   16
Pongo_abelii_76_2   (Sumatran orangutan)   12
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   16
Papio_anubis_76   (Olive baboon)   16
Macaca_mulatta_76_1   (Rhesus monkey)   20
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   25
Otolemur_garnettii_76_3   (Small-eared galago)   13
Microcebus_murinus_76_1   (Gray mouse lemur)   8
Rattus_norvegicus_76_5.0   (Norway rat)   15
Mus_musculus_76_38   (House mouse)   29
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   10
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   11
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   13
Cavia_porcellus_76_3   (Domestic guinea pig)   14
Oryctolagus_cuniculus_76_2   (Rabbit)   10
Ochotona_princeps_76   (American pika)   8
Tupaia_belangeri_76   (Northern tree shrew)   10
Sus_scrofa_76_10.2   (Pig)   18
Bos_taurus_76_3.1   (Cattle)   13
Ovis_aries_76_3.1   (Sheep)   9
Vicugna_pacos_76_1   (Alpaca)   3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   12
Mustela_putorius_furo_76_1.0   (Domestic ferret)   12
Ailuropoda_melanoleuca_76_1   (Giant panda)   15
Canis_familiaris_76_3.1   (Dog)   11
Felis_catus_76_6.2   (Domestic cat)   11
Equus_caballus_76_2   (Horse)   10
Myotis_lucifugus_76_2.0   (Little brown bat)   7
Pteropus_vampyrus_76_1   (Large flying fox)   13
Sorex_araneus_76_1   (European shrew)   5
Erinaceus_europaeus_76   (Western European hedgehog)   6
Procavia_capensis_76_1   (Cape rock hyrax)   11
Loxodonta_africana_76_3   (African savanna elephant)   14
Echinops_telfairi_76   (Small Madagascar hedgehog)   5
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   13
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   5
Macropus_eugenii_76_1.0   (Tammar wallaby)   11
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   10
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   16
Ornithorhynchus_anatinus_76_5   (Platypus)   6
Saccoglossus_kowalevskii_v3.0 4
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   4
Gallus_gallus_76_4   (Chicken)   11
Anas_platyrhynchos_76_1.0   (Mallard)   4
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   10
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   11
Anolis_carolinensis_76_2.0   (Green anole)   14
Xenopus_laevis_   (African clawed frog)   65
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   16
Latimeria_chalumnae_76_1   (Coelacanth)   14
Lepisosteus_oculatus_76   (Spotted gar)   18
Gadus_morhua_76_1   (Atlantic cod)   22
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   23
Takifugu_rubripes_76_4   (Torafugu)   33
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   34
Oryzias_latipes_76_1   (Japanese medaka)   26
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   25
Poecilia_formosa_76   (Amazon molly)   28
Oreochromis_niloticus_76_1.0   (Nile tilapia)   25
Astyanax_mexicanus_76   (Mexican tetra)   21
Danio_rerio_76_9   (Zebrafish)   34
Oikopleura_dioica 5
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   16
Ciona_intestinalis_76   (Vase tunicate)   9
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   7
Adineta_vaga 22
Octopus_bimaculoides_280 4
Crassostrea_gigas_22   (Pacific oyster)   6
Lottia_gigantea_   (Owl limpet)   8
Helobdella_robusta_ 11
Capitella_sp._I_ 9
Danaus_plexippus_OGS1.0   (Monarch butterfly)   3
Heliconius_melpomene_   (Postman butterfly)   2
Bombyx_mori_   (Domestic silkworm)   2
Nasonia_vitripennis_   (Jewel wasp)   4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Lucilia_cuprina   (Australian sheep blowfly)   2
Drosophila_grimshawi_1.3 7
Drosophila_willistoni_1.3 5
Drosophila_pseudoobscura_2.13 5
Drosophila_persimilis_1.3 5
Drosophila_suzukii 6
Drosophila_yakuba_1.3 7
Drosophila_simulans_1.3 6
Drosophila_sechellia_1.3 7
Drosophila_melanogaster_76_5   (Fruit fly)   23
Drosophila_erecta_1.3 6
Drosophila_ananassae_1.3 5
Drosophila_virilis_1.2 7
Drosophila_mojavensis_1.3 7
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   5
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   5
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   17
Tribolium_castaneum_3.0   (Red flour beetle)   6
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6
Acyrthosiphon_pisum_   (Pea aphid)   7
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   7
Strigamia_maritima_22 5
Sarcoptes_scabiei 5
Tetranychus_urticae_   (Two-spotted spider mite)   4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   5
Pristionchus_pacificus_ 7
Meloidogyne_incognita_   (Southern root-knot nematode)   22
Meloidogyne_hapla_ 3
Onchocerca_volvulus_22 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   7
Caenorhabditis_japonica_ 12
Caenorhabditis_brenneri_ 21
Caenorhabditis_remanei_ 23
Caenorhabditis_elegans_76_235   (Roundworm)   28
Caenorhabditis_briggsae_2 21
Trichinella_spiralis_22 6
Hymenolepis_microstoma_ 7
Echinococcus_multilocularis_ 6
Echinococcus_granulosus_ 6
Taenia_solium_   (Pork tapeworm)   5
Schistosoma_mansoni_ 12
Mnemiopsis_leidyi   (Sea walnut)   7
Thelohanellus_kitauei 2
Acropora_digitifera_v1.0 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   6
Hydra_vulgaris 4
Amphimedon_queenslandica 5
Trichoplax_adhaerens_ 8
Proterospongia_sp._ATCC_50818_ 2
Monosiga_brevicollis_ 3
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 5
Conidiobolus_coronatus_NRRL28638_v1.0 7
Mortierella_verticillata_NRRL_6337_ 9
Phycomyces_blakesleeanus_ 10
Rhizopus_oryzae_RA_99-880_ 5
Mucor_circinelloides_ 10
Rhizomucor_miehei_CAU432_ 7
Malassezia_globosa_CBS_7966_ 2
Sporisorium_reilianum_22 4
Ustilago_maydis_ 4
Mixia_osmundae_IAM_14324_v1.0 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 8
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4
Melampsora_laricis-populina_ 4
Rhodotorula_graminis_WP1_v1.0 6
Sporobolomyces_roseus_IAM_13481_ 7
Microbotryum_violaceum_22 7
Wallemia_sebi_v1.0 3
Sphaerobolus_stellatus_v1.0 11
Piloderma_croceum_F_1598_v1.0 17
Serpula_lacrymans_var._lacrymans_S7.9_ 13
Coniophora_puteana 12
Hydnomerulius_pinastri_v2.0 13
Paxillus_rubicundulus_Ve08.2h10_v1.0 11
Pisolithus_microcarpus_441_v1.0 9
Pisolithus_tinctorius_Marx_270_v1.0 11
Scleroderma_citrinum_Foug_A_v1.0 11
Coprinopsis_cinerea_okayama7_130_v3 16
Pleurotus_ostreatus_   (Oyster mushroom)   13
Amanita_thiersii_Skay4041_v1.0 13
Amanita_muscaria_Koide_v1.0   (Fly agaric)   12
Galerina_marginata_v1.0 21
Hebeloma_cylindrosporum_h7_v2.0 16
Laccaria_bicolor_S238N-H82_ 29
Agaricus_bisporus_var._bisporus_ 13
Schizophyllum_commune_ 15
Stereum_hirsutum_FP-91666_SS1__v1.0 12
Heterobasidion_annosum_ 11
Gloeophyllum_trabeumv1.0 14
Punctularia_strigosozonata_v1.0 14
Sebacina_vermifera_MAFF_305830_v1.0 16
Fomitiporia_mediterranea_v1.0 12
Tulasnella_calospora_AL13/4D_v1.0 9
Postia_placenta_ 20
Wolfiporia_cocos_MD-104_SS10__v1.0 15
Fomitopsis_pinicolav1.0 14
Fomitopsis_pinicola_FP-58527_SS1_v3.0 14
Phanerochaete_chrysosporium_RP-78_2.1 9
Dichomitus_squalens 15
Trametes_versicolor_v1.0 14
Tremella_mesenterica_   (Witches' butter)   3
Daldinia_eschscholzii_EC12_v1.0 3
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 4
Magnaporthe_grisea_70-15_ 2
Podospora_anserina_ 3
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 3
Chaetomium_globosum_CBS_148.51_ 3
Neurospora_tetrasperma_ 3
Neurospora_discreta_FGSC_8579_ 3
Neurospora_crassa_OR74A_ 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   3
Verticillium_albo-atrum_VaMs.102_ 2
Verticillium_dahliae_VdLs.17_ 3
Acremonium_alcalophilumv_1.0 3
Glomerella_graminicola_22 3
Fusarium_graminearum_ 3
Nectria_haematococca_mpVI_ 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3
Fusarium_verticillioides_7600_ 3
Trichoderma_asperellum_CBS_433.97_v1.0 3
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 3
Trichoderma_virens_Gv29-8_ 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   3
Botrytis_cinerea_B05.10_ 3
Sclerotinia_sclerotiorum_ 3
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 5
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4
Cochliobolus_victoriae_FI3_v1.0 4
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4
Alternaria_brassicicola_ 2
Cochliobolus_lunatus_m118_v2.0 4
Pyrenophora_teres_f._teres_22 4
Pyrenophora_tritici-repentis_ 3
Stagonospora_nodorum_ 3
Mycosphaerella_graminicola_IPO323_ 4
Zasmidium_cellare_ATCC_36951_v1.0 3
Dothistroma_septosporum 3
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3
Paracoccidioides_brasiliensis_Pb18_ 3
Coccidioides_posadasii_RMSCC_3488_ 3
Coccidioides_immitis_RS_ 3
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 3
Trichophyton_equinum_CBS_127.97_ 2
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 2
Trichophyton_tonsurans_CBS_112818_ 2
Trichophyton_rubrum_CBS_118892_ 3
Uncinocarpus_reesii_1704_ 2
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 3
Aspergillus_acidus_v1.0 3
Aspergillus_fumigatus_Af293 3
Aspergillus_brasiliensis_v1.0 3
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 3
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 3
Neosartorya_fischeri_NRRL_181_ 3
Aspergillus_terreus_NIH2624_ 3
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 4
Aspergillus_oryzae_RIB40_ 4
Aspergillus_niger_22 3
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 3
Penicillium_marneffei_ATCC_18224_ 4
Tuber_melanosporum_Mel28_22 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2
Candida_dubliniensis_CD36_ 2
Candida_tropicalis_MYA-3404_ 2
Candida_parapsilosis_ 2
Candida_albicans_SC5314 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2
Pichia_stipitis_CBS_6054_ 2
Candida_guilliermondii_ATCC_6260_ 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Debaromyces_hansenii 2
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 2
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 2
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 2
Ashbya_gossypii_ATCC_10895_ 2
Zygosaccharomyces_rouxii_ 2
Saccharomyces_mikatae_MIT 2
Saccharomyces_paradoxus_MIT 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   2
Saccharomyces_bayanus_MIT 2
Kluyveromyces_lactis 2
Schizosaccharomyces_cryophilus_OY26_22 2
Schizosaccharomyces_octosporus_yFS286_ 2
Schizosaccharomyces_japonicus_yFS275_ 2
Schizosaccharomyces_pombe   (Fission yeast)   2
Catenaria_anguillulae_PL171_v1.0 12
Allomyces_macrogynus_ATCC_38327_ 18
Spizellomyces_punctatus_DAOM_BR117_ 5
Dictyostelium_discoideum 11
Dictyostelium_purpureum_ 9
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 4
Eucalyptus_grandis_v201   (Rose gum)   3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3
Gossypium_raimondii_v221 12
Citrus_clementina_v165 7
Citrus_sinensis_v154   (Sweet orange)   6
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   6
Capsella_rubella_v183 5
Arabidopsis_lyrata_   (Lyrate rockcress)   4
Arabidopsis_thaliana_10   (Thale cress)   6
Carica_papaya_   (Papaya)   2
Medicago_truncatula_   (Barrel medic)   10
Phaseolus_vulgaris_v186   (French bean)   8
Glycine_max_v109   (Soybean)   11
Cucumis_sativus_v122   (Cucumber)   8
Fragaria_vesca_   (Wild strawberry)   3
Malus_domestica_v196   (Apple)   5
Prunus_persica_v139   (Peach)   4
Linum_usitatissimum_v200   (Flax)   5
Manihot_esculenta_v147   (Cassava)   4
Populus_trichocarpa_v156   (Black cottonwood)   5
Vitis_vinifera_   (Wine grape)   5
Mimulus_guttatus_v140   (Spotted monkey flower)   5
Solanum_lycopersicum_v.2.3   (Tomato)   3
Solanum_tuberosum_   (Potato)   5
Actinidia_chinensis_Hongyang_ 2
Aquilegia_coerulea_v195 4
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   9
Aegilops_tauschii_22 3
Brachypodium_distachyon_   (Stiff brome)   3
Oryza_barthii_22   (African wild rice)   7
Oryza_meridionalis_22 6
Oryza_glumaepatula_22 8
Oryza_glaberrima   (African rice)   4
Oryza_punctata_22 5
Oryza_nivara_22 8
Oryza_brachyantha_22   (Malo sina)   4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   7
Panicum_virgatum_v202   (Switchgrass)   7
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   6
Zea_mays_v181   (Maize)   7
Sorghum_bicolor_   (Sorghum)   3
Musa_balbisiana   (Balbis banana)   3
Musa_acuminata_22   (Wild Malaysian banana)   3
Amborella_trichopoda_22 3
Physcomitrella_patens 1
Bigelowiella_natans_CCMP2755_22 26
Ectocarpus_siliculosus 6
Aureococcus_anophagefferens_ 3
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 1
Fragilariopsis_cylindrus 1
Thalassiosira_pseudonana_CCMP1335 2
Naegleria_gruberi_ 18
Trichomonas_vaginalis_ 6
Emiliania_huxleyi_CCMP1516_ 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   32
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   26
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   17
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   10
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   23
Cryptococcus_neoformans_var._grubii_H99_ 3
Cryptococcus_neoformans_B-3501A_ 3
Cryptococcus_neoformans_JEC21_ 3
Paracoccidioides_brasiliensis_Pb01_ 3
Paracoccidioides_brasiliensis_Pb03_ 3
Coccidioides_posadasii_str._Silveira_ 3
Coccidioides_immitis_RMSCC_3703_ 3
Coccidioides_immitis_RMSCC_2394_ 3
Coccidioides_immitis_H538.4_ 3
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 2
Histoplasma_capsulatum_H88 3
Histoplasma_capsulatum_G186AR 2
Aspergillus_fumigatus_A1163_ 3
Candida_albicans_WO-1_ 2
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 2
Saccharomyces_cerevisiae_CLIB324 2
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 2
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_VL3 2
Saccharomyces_cerevisiae_Vin13 2
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 2
Saccharomyces_cerevisiae_Sigma1278b 2
Saccharomyces_cerevisiae_W303 2
Saccharomyces_cerevisiae_JAY291 2
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 1
Saccharomyces_cerevisiae_T73 2
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 2
Saccharomyces_cerevisiae_YJM789 2
Saccharomyces_cerevisiae_RM11-1a 2
Saccharomyces_cerevisiae_RM11-1a_ 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2
Schizosaccharomyces_pombe_972h-_ 2
Batrachochytrium_dendrobatidis_JEL423_ 6
Batrachochytrium_dendrobatidis_JAM81_ 8
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4
Hordeum_vulgare_22   (Domesticated barley)   10
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   18
Pan_troglodytes_69_2.1.4   (Chimpanzee)   16
Gorilla_gorilla_69_3.1   (Western gorilla)   13
Pongo_abelii_69_2   (Sumatran orangutan)   12
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   15
Macaca_mulatta_69_1   (Rhesus monkey)   14
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   16
Otolemur_garnettii_69_3   (Small-eared galago)   13
Microcebus_murinus_69_1   (Gray mouse lemur)   8
Rattus_norvegicus_69_3.4   (Norway rat)   11
Mus_musculus_69_38   (House mouse)   16
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   10
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   11
Cavia_porcellus_69_3   (Domestic guinea pig)   14
Oryctolagus_cuniculus_69_2   (Rabbit)   11
Ochotona_princeps_69   (American pika)   8
Tupaia_belangeri_69   (Northern tree shrew)   10
Sus_scrofa_69_10.2   (Pig)   11
Bos_taurus_69_3.1   (Cattle)   13
Vicugna_pacos_69_1   (Alpaca)   3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   12
Mustela_putorius_furo_69_1.0   (Domestic ferret)   12
Ailuropoda_melanoleuca_69_1   (Giant panda)   14
Canis_familiaris_69_3.1   (Dog)   10
Felis_catus_69   (Domestic cat)   5
Equus_caballus_69_2   (Horse)   10
Myotis_lucifugus_69_2.0   (Little brown bat)   7
Pteropus_vampyrus_69_1   (Large flying fox)   13
Sorex_araneus_69_1   (European shrew)   5
Erinaceus_europaeus_69   (Western European hedgehog)   6
Procavia_capensis_69_1   (Cape rock hyrax)   11
Loxodonta_africana_69_3   (African savanna elephant)   12
Echinops_telfairi_69   (Small Madagascar hedgehog)   5
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   6
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   5
Macropus_eugenii_69_1.0   (Tammar wallaby)   11
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   8
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   14
Ornithorhynchus_anatinus_69_5   (Platypus)   5
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   4
Gallus_gallus_69_2   (Chicken)   8
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   10
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   10
Anolis_carolinensis_69_2.0   (Green anole)   10
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   13
Latimeria_chalumnae_69_1   (Coelacanth)   12
Gadus_morhua_69_1   (Atlantic cod)   22
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   21
Takifugu_rubripes_69_4   (Torafugu)   24
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   26
Oryzias_latipes_69_1   (Japanese medaka)   23
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   25
Oreochromis_niloticus_69_1.0   (Nile tilapia)   24
Danio_rerio_69_9   (Zebrafish)   25
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   7
Ciona_intestinalis_69   (Vase tunicate)   9
Drosophila_melanogaster_69_5   (Fruit fly)   10
Caenorhabditis_elegans_69_215   (Roundworm)   22
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2
Arabidopsis_thaliana_10   (Thale cress)   4

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   32
Homo_sapiens__(NCBI_version)   (Human)   24
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   16
Loa_loa_v3.3_(Request)   (Eye worm)   9
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   5
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   7
Moniliophthora_perniciosa_FA553__(Genome_survey) 2
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   5
Ricinus_communis__(Early_assembly)   (Castor bean)   3
Nicotiana_benthamiana_0.4.4_(Early_draft) 7
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3
Phoenix_dactylifera__(Early_draft)   (Date palm)   2
STRING_v9.0.5_(STRING) 762
NCBI_2017_08_genome 8034
PDB_chains_(SCOP_1.75)_(PDB) 18
Uniprot_2018_03_genome 50910
Protozoadb_2010_08_(Protozoadb) 16
TargetDB__(Targets) 17
Protein_Data_Bank_(all_PDB_sequenc) 21

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