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Domain combinations for _gap_,48065,50729,57903,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48065 - DBL homology domain (DH-domain)
50729 - PH domain-like
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Tupaia_belangeri_76   (Northern tree shrew)   2
Pteropus_vampyrus_76_1   (Large flying fox)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Caenorhabditis_remanei_ 2
Conidiobolus_coronatus_NRRL28638_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 4
Entamoeba_histolytica_1 2
Bigelowiella_natans_CCMP2755_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Hyaloperonospora_arabidopsidis_22 0

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0

Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   2
Felis_catus_69   (Domestic cat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Protozoadb_2010_08_(Protozoadb) 8
STRING_v9.0.5_(STRING) 6
NCBI_2017_08_genome 102
Uniprot_2018_03_genome 1036

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