SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,48350,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48350 - GTPase activation domain, GAP

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   29
Pan_troglodytes_76_2.1.4   (Chimpanzee)   10
Gorilla_gorilla_76_3.1   (Western gorilla)   16
Pongo_abelii_76_2   (Sumatran orangutan)   10
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   10
Papio_anubis_76   (Olive baboon)   10
Macaca_mulatta_76_1   (Rhesus monkey)   14
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   20
Otolemur_garnettii_76_3   (Small-eared galago)   9
Microcebus_murinus_76_1   (Gray mouse lemur)   5
Rattus_norvegicus_76_5.0   (Norway rat)   14
Mus_musculus_76_38   (House mouse)   18
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   7
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   7
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   8
Cavia_porcellus_76_3   (Domestic guinea pig)   8
Oryctolagus_cuniculus_76_2   (Rabbit)   7
Ochotona_princeps_76   (American pika)   7
Tupaia_belangeri_76   (Northern tree shrew)   12
Sus_scrofa_76_10.2   (Pig)   20
Bos_taurus_76_3.1   (Cattle)   7
Ovis_aries_76_3.1   (Sheep)   10
Vicugna_pacos_76_1   (Alpaca)   8
Tursiops_truncatus_76_1   (Bottlenose dolphin)   7
Mustela_putorius_furo_76_1.0   (Domestic ferret)   8
Ailuropoda_melanoleuca_76_1   (Giant panda)   6
Canis_familiaris_76_3.1   (Dog)   10
Felis_catus_76_6.2   (Domestic cat)   7
Equus_caballus_76_2   (Horse)   7
Myotis_lucifugus_76_2.0   (Little brown bat)   9
Pteropus_vampyrus_76_1   (Large flying fox)   9
Sorex_araneus_76_1   (European shrew)   9
Erinaceus_europaeus_76   (Western European hedgehog)   5
Procavia_capensis_76_1   (Cape rock hyrax)   10
Loxodonta_africana_76_3   (African savanna elephant)   12
Echinops_telfairi_76   (Small Madagascar hedgehog)   7
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_76_1.0   (Tammar wallaby)   6
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   11
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8
Ornithorhynchus_anatinus_76_5   (Platypus)   6
Saccoglossus_kowalevskii_v3.0 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   9
Gallus_gallus_76_4   (Chicken)   7
Anas_platyrhynchos_76_1.0   (Mallard)   7
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   7
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   6
Anolis_carolinensis_76_2.0   (Green anole)   9
Xenopus_laevis_   (African clawed frog)   10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9
Latimeria_chalumnae_76_1   (Coelacanth)   7
Lepisosteus_oculatus_76   (Spotted gar)   11
Gadus_morhua_76_1   (Atlantic cod)   8
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   8
Takifugu_rubripes_76_4   (Torafugu)   24
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   7
Oryzias_latipes_76_1   (Japanese medaka)   8
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   9
Poecilia_formosa_76   (Amazon molly)   10
Oreochromis_niloticus_76_1.0   (Nile tilapia)   16
Astyanax_mexicanus_76   (Mexican tetra)   7
Danio_rerio_76_9   (Zebrafish)   12
Oikopleura_dioica 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3
Adineta_vaga 7
Octopus_bimaculoides_280 5
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   1
Helobdella_robusta_ 1
Capitella_sp._I_ 5
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   2
Nasonia_vitripennis_   (Jewel wasp)   2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2
Lucilia_cuprina   (Australian sheep blowfly)   4
Drosophila_grimshawi_1.3 2
Drosophila_willistoni_1.3 3
Drosophila_pseudoobscura_2.13 2
Drosophila_persimilis_1.3 2
Drosophila_suzukii 3
Drosophila_yakuba_1.3 2
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 2
Drosophila_melanogaster_76_5   (Fruit fly)   5
Drosophila_erecta_1.3 2
Drosophila_ananassae_1.3 2
Drosophila_virilis_1.2 2
Drosophila_mojavensis_1.3 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3
Acyrthosiphon_pisum_   (Pea aphid)   3
Rhodnius_prolixus_22 4
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 3
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 3
Meloidogyne_incognita_   (Southern root-knot nematode)   5
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 4
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3
Caenorhabditis_japonica_ 5
Caenorhabditis_brenneri_ 3
Caenorhabditis_remanei_ 3
Caenorhabditis_elegans_76_235   (Roundworm)   5
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 11
Echinococcus_multilocularis_ 11
Echinococcus_granulosus_ 10
Taenia_solium_   (Pork tapeworm)   11
Schistosoma_mansoni_ 10
Mnemiopsis_leidyi   (Sea walnut)   4
Acropora_digitifera_v1.0 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   3
Hydra_vulgaris 3
Amphimedon_queenslandica 4
Trichoplax_adhaerens_ 2
Proterospongia_sp._ATCC_50818_ 8
Monosiga_brevicollis_ 6
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 5
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 7
Phycomyces_blakesleeanus_ 3
Rhizopus_oryzae_RA_99-880_ 5
Mucor_circinelloides_ 2
Rhizomucor_miehei_CAU432_ 0
Malassezia_globosa_CBS_7966_ 6
Sporisorium_reilianum_22 5
Ustilago_maydis_ 5
Mixia_osmundae_IAM_14324_v1.0 3
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 7
Melampsora_laricis-populina_ 6
Rhodotorula_graminis_WP1_v1.0 4
Sporobolomyces_roseus_IAM_13481_ 3
Microbotryum_violaceum_22 8
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 2
Piloderma_croceum_F_1598_v1.0 3
Serpula_lacrymans_var._lacrymans_S7.9_ 2
Coniophora_puteana 3
Hydnomerulius_pinastri_v2.0 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 3
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 3
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 7
Pleurotus_ostreatus_   (Oyster mushroom)   2
Amanita_thiersii_Skay4041_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3
Galerina_marginata_v1.0 3
Hebeloma_cylindrosporum_h7_v2.0 3
Laccaria_bicolor_S238N-H82_ 3
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 2
Stereum_hirsutum_FP-91666_SS1__v1.0 2
Heterobasidion_annosum_ 3
Gloeophyllum_trabeumv1.0 2
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 2
Fomitiporia_mediterranea_v1.0 4
Tulasnella_calospora_AL13/4D_v1.0 2
Postia_placenta_ 5
Wolfiporia_cocos_MD-104_SS10__v1.0 2
Fomitopsis_pinicolav1.0 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 2
Dichomitus_squalens 1
Trametes_versicolor_v1.0 4
Tremella_mesenterica_   (Witches' butter)   5
Daldinia_eschscholzii_EC12_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 3
Magnaporthe_grisea_70-15_ 3
Podospora_anserina_ 2
Sporotrichum_thermophile_ATCC_42464_ 3
Thielavia_terrestris_NRRL_8126_ 3
Chaetomium_globosum_CBS_148.51_ 4
Neurospora_tetrasperma_ 3
Neurospora_discreta_FGSC_8579_ 3
Neurospora_crassa_OR74A_ 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   3
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 2
Acremonium_alcalophilumv_1.0 3
Glomerella_graminicola_22 2
Fusarium_graminearum_ 2
Nectria_haematococca_mpVI_ 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 2
Trichoderma_atroviride_ 2
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 2
Trichoderma_virens_Gv29-8_ 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2
Trichoderma_harzianum_CBS_226.95_v1.0 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 3
Sclerotinia_sclerotiorum_ 5
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 2
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 2
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 2
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 2
Arthroderma_benhamiae_CBS_112371_ 2
Trichophyton_tonsurans_CBS_112818_ 2
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 2
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 2
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 1
Tuber_melanosporum_Mel28_22 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2
Hansenula_polymorpha_v2.0 3
Dekkera_bruxellensis_CBS_2499_v2.0 3
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2
Candida_dubliniensis_CD36_ 4
Candida_tropicalis_MYA-3404_ 3
Candida_parapsilosis_ 3
Candida_albicans_SC5314 4
Lodderomyces_elongisporus_NRRL_YB-4239_ 4
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 3
Candida_guilliermondii_ATCC_6260_ 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 2
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3
Yarrowia_lipolytica_CLIB122 4
Candida_lusitaniae_ATCC_42720_ 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3
Vanderwaltozyma_polyspora_DSM_70294_ 5
Candida_glabrata_CBS138 4
Kluyveromyces_thermotolerans_CBS_6340 4
Lachancea_kluyveri_ 4
Kluyveromyces_waltii 3
Ashbya_gossypii_ATCC_10895_ 3
Zygosaccharomyces_rouxii_ 3
Saccharomyces_mikatae_MIT 3
Saccharomyces_paradoxus_MIT 4
Saccharomyces_cerevisiae_76   (Baker's yeast)   4
Saccharomyces_bayanus_MIT 4
Kluyveromyces_lactis 3
Schizosaccharomyces_cryophilus_OY26_22 2
Schizosaccharomyces_octosporus_yFS286_ 2
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 4
Allomyces_macrogynus_ATCC_38327_ 6
Spizellomyces_punctatus_DAOM_BR117_ 3
Dictyostelium_discoideum 9
Dictyostelium_purpureum_ 7
Entamoeba_dispar_1.2 37
Entamoeba_invadens_1.2 42
Entamoeba_histolytica_1 34
Pinus_taeda   (Loblolly pine)   1
Eucalyptus_grandis_v201   (Rose gum)   5
Theobroma_cacao_B97-61/B2_v1   (Cacao)   4
Gossypium_raimondii_v221 14
Citrus_clementina_v165 3
Citrus_sinensis_v154   (Sweet orange)   5
Thellungiella_halophila_v173 4
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8
Capsella_rubella_v183 4
Arabidopsis_lyrata_   (Lyrate rockcress)   4
Arabidopsis_thaliana_10   (Thale cress)   4
Carica_papaya_   (Papaya)   5
Medicago_truncatula_   (Barrel medic)   5
Phaseolus_vulgaris_v186   (French bean)   6
Glycine_max_v109   (Soybean)   10
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   3
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   5
Linum_usitatissimum_v200   (Flax)   7
Manihot_esculenta_v147   (Cassava)   6
Populus_trichocarpa_v156   (Black cottonwood)   7
Mimulus_guttatus_v140   (Spotted monkey flower)   3
Solanum_lycopersicum_v.2.3   (Tomato)   5
Solanum_tuberosum_   (Potato)   6
Actinidia_chinensis_Hongyang_ 6
Aquilegia_coerulea_v195 3
Triticum_urartu_22 3
Triticum_aestivum_22   (Bread wheat)   13
Aegilops_tauschii_22 4
Brachypodium_distachyon_   (Stiff brome)   6
Oryza_barthii_22   (African wild rice)   6
Oryza_meridionalis_22 5
Oryza_glumaepatula_22 8
Oryza_glaberrima   (African rice)   5
Oryza_punctata_22 7
Oryza_nivara_22 6
Oryza_brachyantha_22   (Malo sina)   3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   6
Oryza_sativa_v193   (Rice)   6
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   10
Panicum_virgatum_v202   (Switchgrass)   9
Setaria_italica_v164   (Foxtail millet)   6
Zea_mays_subsp._mays_   (Maize)   6
Zea_mays_v181   (Maize)   6
Sorghum_bicolor_   (Sorghum)   6
Musa_balbisiana   (Balbis banana)   9
Amborella_trichopoda_22 3
Thecamonas_trahens_ATCC_50062_ 3
Bigelowiella_natans_CCMP2755_22 2
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 2
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 1
Theileria_parva__ 1
Theileria_annulata 1
Naegleria_gruberi_ 8
Trichomonas_vaginalis_ 19
Guillardia_theta_CCMP2712_v1.0_ 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   12
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   3
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4
Cryptococcus_neoformans_var._grubii_H99_ 3
Cryptococcus_neoformans_B-3501A_ 3
Cryptococcus_neoformans_JEC21_ 3
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 2
Candida_albicans_WO-1_ 4
Saccharomyces_cerevisiae_UC5 4
Saccharomyces_cerevisiae_PW5 2
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 4
Saccharomyces_cerevisiae_FostersB 4
Saccharomyces_cerevisiae_FostersO 2
Saccharomyces_cerevisiae_VL3 2
Saccharomyces_cerevisiae_Vin13 4
Saccharomyces_cerevisiae_LalvinQA23 2
Saccharomyces_cerevisiae_AWRI796 2
Saccharomyces_cerevisiae_Sigma1278b 4
Saccharomyces_cerevisiae_W303 4
Saccharomyces_cerevisiae_JAY291 4
Saccharomyces_cerevisiae_AWRI1631 2
Saccharomyces_cerevisiae_YPS163 2
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 3
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 4
Saccharomyces_cerevisiae_YJM789 4
Saccharomyces_cerevisiae_RM11-1a 3
Saccharomyces_cerevisiae_RM11-1a_ 3
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   4
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 3
Batrachochytrium_dendrobatidis_JAM81_ 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   5

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   10
Gorilla_gorilla_69_3.1   (Western gorilla)   12
Pongo_abelii_69_2   (Sumatran orangutan)   9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   9
Macaca_mulatta_69_1   (Rhesus monkey)   6
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   11
Otolemur_garnettii_69_3   (Small-eared galago)   9
Microcebus_murinus_69_1   (Gray mouse lemur)   5
Rattus_norvegicus_69_3.4   (Norway rat)   9
Mus_musculus_69_38   (House mouse)   9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   7
Cavia_porcellus_69_3   (Domestic guinea pig)   7
Oryctolagus_cuniculus_69_2   (Rabbit)   6
Ochotona_princeps_69   (American pika)   7
Tupaia_belangeri_69   (Northern tree shrew)   12
Sus_scrofa_69_10.2   (Pig)   9
Bos_taurus_69_3.1   (Cattle)   7
Vicugna_pacos_69_1   (Alpaca)   8
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7
Mustela_putorius_furo_69_1.0   (Domestic ferret)   8
Ailuropoda_melanoleuca_69_1   (Giant panda)   6
Canis_familiaris_69_3.1   (Dog)   8
Felis_catus_69   (Domestic cat)   11
Equus_caballus_69_2   (Horse)   7
Myotis_lucifugus_69_2.0   (Little brown bat)   9
Pteropus_vampyrus_69_1   (Large flying fox)   9
Sorex_araneus_69_1   (European shrew)   9
Erinaceus_europaeus_69   (Western European hedgehog)   5
Procavia_capensis_69_1   (Cape rock hyrax)   10
Loxodonta_africana_69_3   (African savanna elephant)   9
Echinops_telfairi_69   (Small Madagascar hedgehog)   7
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   9
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_69_1.0   (Tammar wallaby)   6
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   8
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8
Ornithorhynchus_anatinus_69_5   (Platypus)   5
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   7
Gallus_gallus_69_2   (Chicken)   7
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_69_2.0   (Green anole)   7
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7
Latimeria_chalumnae_69_1   (Coelacanth)   6
Gadus_morhua_69_1   (Atlantic cod)   7
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7
Takifugu_rubripes_69_4   (Torafugu)   10
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   7
Oryzias_latipes_69_1   (Japanese medaka)   7
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   9
Oreochromis_niloticus_69_1.0   (Nile tilapia)   11
Danio_rerio_69_9   (Zebrafish)   8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   3
Caenorhabditis_elegans_69_215   (Roundworm)   2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   4
Arabidopsis_thaliana_10   (Thale cress)   4

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   35
Homo_sapiens__(NCBI_version)   (Human)   12
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   10
Loa_loa_v3.3_(Request)   (Eye worm)   5
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   4
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2
Encephalitozoon_intestinalis__(endoparasite) 0
Encephalitozoon_cuniculi_(endoparasite) 0
Lotus_japonicus__(Early_assembly) 3
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 9
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   5
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   5
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
Protein_Data_Bank_(all_PDB_sequenc) 3
Protozoadb_2010_08_(Protozoadb) 183
STRING_v9.0.5_(STRING) 439
NCBI_2017_08_genome 5592
Uniprot_2018_03_genome 25345
TargetDB__(Targets) 5

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