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Domain combinations for _gap_,48371,48350,_gap_,48371,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
48350 - GTPase activation domain, GAP
48371 - ARM repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   1
Ovis_aries_76_3.1   (Sheep)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Loxodonta_africana_76_3   (African savanna elephant)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Crassostrea_gigas_22   (Pacific oyster)   1
Phycomyces_blakesleeanus_ 1
Sporisorium_reilianum_22 1
Galerina_marginata_v1.0 1
Daldinia_eschscholzii_EC12_v1.0 1
Acremonium_alcalophilumv_1.0 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Blumeria_graminis_22 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Loxodonta_africana_69_3   (African savanna elephant)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 1428
NCBI_2017_08_genome 161

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