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Domain combinations for _gap_,48371,49899,48371,_gap_,50729,81837,50978,_gap_,57903 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
49899 - Concanavalin A-like lectins/glucanases
48371 - ARM repeat
50729 - PH domain-like
81837 - BEACH domain
50978 - WD40 repeat-like
57903 - FYVE/PHD zinc finger

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Sus_scrofa_76_10.2   (Pig)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Astyanax_mexicanus_76   (Mexican tetra)   1

Longest transcript per gene
Genome     Number
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Sus_scrofa_69_10.2   (Pig)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 6
Uniprot_2018_03_genome 1196
NCBI_2017_08_genome 66

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