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Domain combinations for _gap_,48371,_gap_,49348,55711 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
49348 - Clathrin adaptor appendage domain
55711 - Subdomain of clathrin and coatomer appendage domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Rhizomucor_miehei_CAU432_ 1
Candida_dubliniensis_CD36_ 1
Candida_albicans_SC5314 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 1
Candida_glabrata_CBS138 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   0
Oryza_meridionalis_22 0
Albugo_laibachii_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Perkinsus_marinus_ATCC_50983_ 1
Neospora_caninum 1
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 1
Plasmodium_falciparum_3D7_ 1
Plasmodium_chabaudi_ 1
Symbiodinium_minutum_clade_B1_v1.2 1

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Strains
Genome     Number
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Neospora_caninum_Nc-Liverpool_6.2 1
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 1

Longest transcript per gene
Genome     Number
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
NCBI_2017_08_genome 47
Uniprot_2018_03_genome 1582
Core_Eukaryotic_Genes_458_(CEGMA) 1
TargetDB__(Targets) 1
Protozoadb_2010_08_(Protozoadb) 4
STRING_v9.0.5_(STRING) 7

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