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Domain combinations for _gap_,48371,_gap_,49899,_gap_,50729,81837,50978 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
49899 - Concanavalin A-like lectins/glucanases
50729 - PH domain-like
81837 - BEACH domain
50978 - WD40 repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Heliconius_melpomene_   (Postman butterfly)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 5
Capsella_rubella_v183 1
Medicago_truncatula_   (Barrel medic)   1
Populus_trichocarpa_v156   (Black cottonwood)   2
Aquilegia_coerulea_v195 1
Triticum_aestivum_22   (Bread wheat)   1
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   1
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Amborella_trichopoda_22 1
Physcomitrella_patens 0

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   1

Others
Genome     Number
Ricinus_communis__(Early_assembly)   (Castor bean)   1
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 1428
NCBI_2017_08_genome 72

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