SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,48403,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48403 - Ankyrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   70
Pan_troglodytes_76_2.1.4   (Chimpanzee)   18
Gorilla_gorilla_76_3.1   (Western gorilla)   22
Pongo_abelii_76_2   (Sumatran orangutan)   17
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   20
Papio_anubis_76   (Olive baboon)   24
Macaca_mulatta_76_1   (Rhesus monkey)   30
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   41
Otolemur_garnettii_76_3   (Small-eared galago)   18
Microcebus_murinus_76_1   (Gray mouse lemur)   16
Rattus_norvegicus_76_5.0   (Norway rat)   20
Mus_musculus_76_38   (House mouse)   40
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   14
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   13
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   14
Cavia_porcellus_76_3   (Domestic guinea pig)   15
Oryctolagus_cuniculus_76_2   (Rabbit)   22
Ochotona_princeps_76   (American pika)   16
Tupaia_belangeri_76   (Northern tree shrew)   9
Sus_scrofa_76_10.2   (Pig)   23
Bos_taurus_76_3.1   (Cattle)   15
Ovis_aries_76_3.1   (Sheep)   22
Vicugna_pacos_76_1   (Alpaca)   7
Tursiops_truncatus_76_1   (Bottlenose dolphin)   17
Mustela_putorius_furo_76_1.0   (Domestic ferret)   13
Ailuropoda_melanoleuca_76_1   (Giant panda)   19
Canis_familiaris_76_3.1   (Dog)   25
Felis_catus_76_6.2   (Domestic cat)   16
Equus_caballus_76_2   (Horse)   13
Myotis_lucifugus_76_2.0   (Little brown bat)   13
Pteropus_vampyrus_76_1   (Large flying fox)   20
Sorex_araneus_76_1   (European shrew)   6
Erinaceus_europaeus_76   (Western European hedgehog)   12
Procavia_capensis_76_1   (Cape rock hyrax)   16
Loxodonta_africana_76_3   (African savanna elephant)   22
Echinops_telfairi_76   (Small Madagascar hedgehog)   20
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   19
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   9
Macropus_eugenii_76_1.0   (Tammar wallaby)   14
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   10
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   15
Ornithorhynchus_anatinus_76_5   (Platypus)   13
Saccoglossus_kowalevskii_v3.0 33
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   14
Gallus_gallus_76_4   (Chicken)   15
Anas_platyrhynchos_76_1.0   (Mallard)   11
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   13
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   15
Anolis_carolinensis_76_2.0   (Green anole)   12
Xenopus_laevis_   (African clawed frog)   10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   14
Latimeria_chalumnae_76_1   (Coelacanth)   19
Lepisosteus_oculatus_76   (Spotted gar)   20
Gadus_morhua_76_1   (Atlantic cod)   12
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   23
Takifugu_rubripes_76_4   (Torafugu)   33
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   11
Oryzias_latipes_76_1   (Japanese medaka)   14
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   13
Poecilia_formosa_76   (Amazon molly)   17
Oreochromis_niloticus_76_1.0   (Nile tilapia)   21
Astyanax_mexicanus_76   (Mexican tetra)   18
Danio_rerio_76_9   (Zebrafish)   27
Oikopleura_dioica 10
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   7
Ciona_intestinalis_76   (Vase tunicate)   4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   47
Adineta_vaga 26
Octopus_bimaculoides_280 18
Crassostrea_gigas_22   (Pacific oyster)   24
Lottia_gigantea_   (Owl limpet)   9
Helobdella_robusta_ 16
Capitella_sp._I_ 40
Danaus_plexippus_OGS1.0   (Monarch butterfly)   12
Heliconius_melpomene_   (Postman butterfly)   5
Bombyx_mori_   (Domestic silkworm)   12
Nasonia_vitripennis_   (Jewel wasp)   18
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   10
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   12
Linepithema_humile_v1.1   (Argentine ant)   13
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6
Solenopsis_invicta_v.2.2.3   (Red fire ant)   5
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   8
Atta_cephalotes_v1.1 7
Camponotus_floridanus_v3.3   (Florida carpenter ant)   9
Lucilia_cuprina   (Australian sheep blowfly)   12
Drosophila_grimshawi_1.3 11
Drosophila_willistoni_1.3 10
Drosophila_pseudoobscura_2.13 11
Drosophila_persimilis_1.3 10
Drosophila_suzukii 9
Drosophila_yakuba_1.3 11
Drosophila_simulans_1.3 10
Drosophila_sechellia_1.3 11
Drosophila_melanogaster_76_5   (Fruit fly)   28
Drosophila_erecta_1.3 11
Drosophila_ananassae_1.3 11
Drosophila_virilis_1.2 11
Drosophila_mojavensis_1.3 8
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   12
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   28
Anopheles_darlingi_22   (American malaria mosquito)   13
Anopheles_gambiae_49_3j   (African malaria mosquito)   9
Tribolium_castaneum_3.0   (Red flour beetle)   12
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   10
Acyrthosiphon_pisum_   (Pea aphid)   13
Rhodnius_prolixus_22 6
Daphnia_pulex_   (Common water flea)   26
Strigamia_maritima_22 10
Sarcoptes_scabiei 5
Tetranychus_urticae_   (Two-spotted spider mite)   5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   5
Pristionchus_pacificus_ 6
Meloidogyne_incognita_   (Southern root-knot nematode)   6
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 7
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   9
Caenorhabditis_japonica_ 7
Caenorhabditis_brenneri_ 21
Caenorhabditis_remanei_ 22
Caenorhabditis_elegans_76_235   (Roundworm)   20
Caenorhabditis_briggsae_2 12
Trichinella_spiralis_22 8
Hymenolepis_microstoma_ 5
Echinococcus_multilocularis_ 12
Echinococcus_granulosus_ 9
Taenia_solium_   (Pork tapeworm)   8
Schistosoma_mansoni_ 7
Mnemiopsis_leidyi   (Sea walnut)   19
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 14
Nematostella_vectensis_1.0   (Starlet sea anemone)   6
Hydra_vulgaris 16
Amphimedon_queenslandica 77
Trichoplax_adhaerens_ 8
Proterospongia_sp._ATCC_50818_ 17
Monosiga_brevicollis_ 14
Sphaeroforma_arctica_JP610_ 13
Capsaspora_owczarzaki_ATCC_30864_ 19
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 9
Phycomyces_blakesleeanus_ 5
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 1
Rhizomucor_miehei_CAU432_ 4
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 1
Ustilago_maydis_ 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 2
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 2
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 5
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 4
Pleurotus_ostreatus_   (Oyster mushroom)   1
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 3
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 2
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 3
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 1
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 4
Postia_placenta_ 7
Wolfiporia_cocos_MD-104_SS10__v1.0 2
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 0
Trametes_versicolor_v1.0 1
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 13
Apiospora_montagnei_NRRL_25634_v1.0 24
Magnaporthe_poae_ATCC_64411_22 24
Magnaporthe_grisea_70-15_ 12
Podospora_anserina_ 16
Sporotrichum_thermophile_ATCC_42464_ 5
Thielavia_terrestris_NRRL_8126_ 6
Chaetomium_globosum_CBS_148.51_ 16
Neurospora_tetrasperma_ 8
Neurospora_discreta_FGSC_8579_ 9
Neurospora_crassa_OR74A_ 7
Cryphonectria_parasitica_   (Chestnut blight fungus)   5
Verticillium_albo-atrum_VaMs.102_ 13
Verticillium_dahliae_VdLs.17_ 13
Acremonium_alcalophilumv_1.0 6
Glomerella_graminicola_22 11
Fusarium_graminearum_ 16
Nectria_haematococca_mpVI_ 24
Fusarium_oxysporum_f._sp._lycopersici_4286_ 19
Fusarium_verticillioides_7600_ 18
Trichoderma_asperellum_CBS_433.97_v1.0 9
Trichoderma_atroviride_ 6
Trichoderma_citrinoviride_v1.0 9
Trichoderma_reesei_1.2 7
Trichoderma_virens_Gv29-8_ 11
Trichoderma_longibrachiatum_ATCC_18648_v1.0 8
Trichoderma_harzianum_CBS_226.95_v1.0 10
Amorphotheca_resinae_v1.0   (Creosote fungus)   2
Botrytis_cinerea_B05.10_ 11
Sclerotinia_sclerotiorum_ 11
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 5
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 7
Cochliobolus_victoriae_FI3_v1.0 6
Cochliobolus_carbonum_26-R-13_v1.0 9
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5
Alternaria_brassicicola_ 3
Cochliobolus_lunatus_m118_v2.0 6
Pyrenophora_teres_f._teres_22 5
Pyrenophora_tritici-repentis_ 7
Stagonospora_nodorum_ 15
Mycosphaerella_graminicola_IPO323_ 4
Zasmidium_cellare_ATCC_36951_v1.0 11
Dothistroma_septosporum 4
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3
Paracoccidioides_brasiliensis_Pb18_ 6
Coccidioides_posadasii_RMSCC_3488_ 4
Coccidioides_immitis_RS_ 3
Ajellomyces_dermatitidis_SLH14081_ 9
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 6
Microsporum_canis_CBS_113480_ 9
Trichophyton_equinum_CBS_127.97_ 10
Trichophyton_verrucosum_HKI_0517_ 8
Arthroderma_benhamiae_CBS_112371_ 9
Trichophyton_tonsurans_CBS_112818_ 5
Trichophyton_rubrum_CBS_118892_ 6
Uncinocarpus_reesii_1704_ 7
Aspergillus_zonatus_v1.0 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 11
Penicillium_chrysogenum_v1.0 6
Aspergillus_acidus_v1.0 8
Aspergillus_fumigatus_Af293 6
Aspergillus_brasiliensis_v1.0 9
Aspergillus_nidulans_FGSC_A4_ 6
Aspergillus_sydowii_v1.0 20
Aspergillus_versicolor_v1.0 17
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 7
Neosartorya_fischeri_NRRL_181_ 9
Aspergillus_terreus_NIH2624_ 14
Aspergillus_tubingensis_v1.0 9
Aspergillus_wentii_v1.0 14
Aspergillus_oryzae_RIB40_ 10
Aspergillus_niger_22 12
Aspergillus_niger_ATCC_1015_ 6
Aspergillus_flavus_NRRL3357_ 8
Aspergillus_clavatus_NRRL_1_ 7
Penicillium_marneffei_ATCC_18224_ 15
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   50
Hansenula_polymorpha_v2.0 2
Dekkera_bruxellensis_CBS_2499_v2.0 2
Pichia_membranifaciensv1.0 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2
Candida_dubliniensis_CD36_ 3
Candida_tropicalis_MYA-3404_ 2
Candida_parapsilosis_ 4
Candida_albicans_SC5314 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Debaromyces_hansenii 5
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3
Yarrowia_lipolytica_CLIB122 2
Candida_lusitaniae_ATCC_42720_ 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3
Vanderwaltozyma_polyspora_DSM_70294_ 5
Candida_glabrata_CBS138 3
Kluyveromyces_thermotolerans_CBS_6340 3
Lachancea_kluyveri_ 3
Kluyveromyces_waltii 3
Ashbya_gossypii_ATCC_10895_ 3
Zygosaccharomyces_rouxii_ 4
Saccharomyces_mikatae_MIT 5
Saccharomyces_paradoxus_MIT 5
Saccharomyces_cerevisiae_76   (Baker's yeast)   5
Saccharomyces_bayanus_MIT 3
Kluyveromyces_lactis 4
Schizosaccharomyces_cryophilus_OY26_22 0
Schizosaccharomyces_octosporus_yFS286_ 0
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 35
Allomyces_macrogynus_ATCC_38327_ 19
Spizellomyces_punctatus_DAOM_BR117_ 10
Dictyostelium_discoideum 16
Dictyostelium_purpureum_ 18
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 4
Entamoeba_histolytica_1 3
Selaginella_moellendorffii_ 4
Pinus_taeda   (Loblolly pine)   12
Picea_abies   (Norway spruce)   3
Eucalyptus_grandis_v201   (Rose gum)   69
Theobroma_cacao_B97-61/B2_v1   (Cacao)   20
Gossypium_raimondii_v221 43
Citrus_clementina_v165 39
Citrus_sinensis_v154   (Sweet orange)   41
Thellungiella_halophila_v173 12
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   17
Capsella_rubella_v183 22
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   28
Carica_papaya_   (Papaya)   8
Medicago_truncatula_   (Barrel medic)   25
Phaseolus_vulgaris_v186   (French bean)   24
Glycine_max_v109   (Soybean)   29
Cucumis_sativus_v122   (Cucumber)   19
Fragaria_vesca_   (Wild strawberry)   32
Malus_domestica_v196   (Apple)   60
Prunus_persica_v139   (Peach)   41
Linum_usitatissimum_v200   (Flax)   22
Manihot_esculenta_v147   (Cassava)   20
Populus_trichocarpa_v156   (Black cottonwood)   38
Vitis_vinifera_   (Wine grape)   30
Mimulus_guttatus_v140   (Spotted monkey flower)   11
Solanum_lycopersicum_v.2.3   (Tomato)   12
Solanum_tuberosum_   (Potato)   23
Actinidia_chinensis_Hongyang_ 23
Aquilegia_coerulea_v195 29
Triticum_urartu_22 21
Triticum_aestivum_22   (Bread wheat)   26
Aegilops_tauschii_22 28
Brachypodium_distachyon_   (Stiff brome)   23
Oryza_barthii_22   (African wild rice)   25
Oryza_meridionalis_22 35
Oryza_glumaepatula_22 32
Oryza_glaberrima   (African rice)   17
Oryza_punctata_22 21
Oryza_nivara_22 39
Oryza_brachyantha_22   (Malo sina)   30
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   49
Oryza_sativa_v193   (Rice)   48
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   21
Panicum_virgatum_v202   (Switchgrass)   33
Setaria_italica_v164   (Foxtail millet)   35
Zea_mays_subsp._mays_   (Maize)   17
Zea_mays_v181   (Maize)   20
Sorghum_bicolor_   (Sorghum)   22
Musa_balbisiana   (Balbis banana)   19
Musa_acuminata_22   (Wild Malaysian banana)   22
Amborella_trichopoda_22 8
Physcomitrella_patens 6
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 8
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 32
Volvox_carteri_v199 33
Chlamydomonas_reinhardtii_4.0 36
Ostreococcus_sp._RCC809_ 4
Ostreococcus_lucimarinus_CCE9901_ 5
Ostreococcus_tauri_ 10
Bathycoccus_prasinos_ 4
Micromonas_sp._RCC299_ 5
Micromonas_pusilla_CCMP1545_v3.0 8
Cyanidioschyzon_merolae_strain_10D_22 3
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 8
Thecamonas_trahens_ATCC_50062_ 29
Bigelowiella_natans_CCMP2755_22 32
Giardia_lamblia_2.3 16
Cyanophora_paradoxa_ 11
Leishmania_mexicana_2.4 5
Leishmania_major_strain_Friedlin_ 6
Leishmania_infantum_JPCM5_2.4 5
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 7
Trypanosoma_vivax_ 2
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 91
Aureococcus_anophagefferens_ 9
Albugo_laibachii_22 9
Pythium_iwayamai_DAOM_BR242034_22 32
Pythium_arrhenomanes_ATCC_12531_22 24
Pythium_ultimum_v1.7-2 28
Pythium_aphanidermatum_DAOM_BR444_22 26
Pythium_irregulare_DAOM_BR486_22 30
Pythium_vexans_DAOM_BR484_22 25
Phytophthora_ramorum_1.1   (Sudden oak death agent)   25
Phytophthora_sojae_1.1 56
Phytophthora_infestans_T30-4_ 29
Phytophthora_capsici_ 18
Hyaloperonospora_arabidopsidis_22 5
Phaeodactylum_tricornutumCCAP_1055/1 16
Fragilariopsis_cylindrus 32
Thalassiosira_pseudonana_CCMP1335 14
Perkinsus_marinus_ATCC_50983_ 7
Paramecium_tetraurelia_ 19
Tetrahymena_thermophila_SB210_1_ 9
Ichthyophthirius_multifiliis_strain_G5_ 3
Cryptosporidium_hominis 4
Cryptosporidium_muris 6
Cryptosporidium_parvum_Iowa_II 7
Neospora_caninum 6
Toxoplasma_gondii_VEG 5
Toxoplasma_gondii_ME49 5
Toxoplasma_gondii_GT1 5
Babesia_bovis_T2Bo_ 4
Theileria_parva__ 2
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 2
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 140
Naegleria_gruberi_ 31
Trichomonas_vaginalis_ 165
Guillardia_theta_CCMP2712_v1.0_ 45
Emiliania_huxleyi_CCMP1516_ 39
Acaryochloris_marina_MBIC11017 2
Anabaena_variabilis_ATCC_29413 1
Nostoc_sp._PCC_7107 1
Nostoc_sp._PCC_7120 1
Nakamurella_multipartita_DSM_44233 1
Stackebrandtia_nassauensis_DSM_44728 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Microlunatus_phosphovorus_NM-1 1
Beutenbergia_cavernae_DSM_12333 1
Natranaerobius_thermophilus_JW/NM-WN-LF 0
Desulfotomaculum_ruminis_DSM_2154 1
Gemmatimonas_aurantiaca_T-27 0
Candidatus_Amoebophilus_asiaticus_5a2 3
Candidatus_Cardinium_hertigii 1
Marivirga_tractuosa_DSM_4126 1
Dyadobacter_fermentans_DSM_18053 1
Cellulophaga_algicola_DSM_14237 2
Cellulophaga_lytica_DSM_7489 1
Waddlia_chondrophila_WSU_86-1044 3
Candidatus_Protochlamydia_amoebophila_UWE25 1
Parachlamydia_acanthamoebae_UV-7 6
Simkania_negevensis_Z 2
Coraliomargarita_akajimensis_DSM_45221 1
Akkermansia_muciniphila_ATCC_BAA-835 1
Fretibacterium_fastidiosum 1
Turneriella_parva_DSM_21527 1
Brachyspira_murdochii_DSM_12563 5
Brachyspira_intermedia_PWS/A 7
Brachyspira_pilosicoli_95/1000 3
Brachyspira_hyodysenteriae_WA1 3
Borrelia_recurrentis_A1 0
Borrelia_duttonii_Ly 0
Borrelia_hermsii_DAH 0
Sphaerochaeta_globus_str._Buddy 1
Deferribacter_desulfuricans_SSM1 1
Candidatus_Solibacter_usitatus_Ellin6076 3
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_roseus_DSM_18391 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1
Helicobacter_hepaticus_ATCC_51449 1
Desulfomonile_tiedjei_DSM_6799 3
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 0
Geobacter_sp._M21 0
Geobacter_metallireducens_GS-15 0
Babela_massiliensis 9
Corallococcus_coralloides_DSM_2259 2
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Dechloromonas_aromatica_RCB 1
Ralstonia_solanacearum_CFBP2957 2
Burkholderia_cenocepacia_HI2424 1
Burkholderia_vietnamiensis_G4 9
Achromobacter_xylosoxidans_A8 1
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 1
Neorickettsia_sennetsu_str._Miyayama 1
Neorickettsia_risticii_str._Illinois 3
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 11
Wolbachia_sp._wRi 5
Ehrlichia_chaffeensis_str._Arkansas 1
Ehrlichia_canis_str._Jake 1
Ehrlichia_ruminantium_str._Gardel 2
Anaplasma_phagocytophilum_HZ 0
Anaplasma_marginale_str._Florida 0
Anaplasma_centrale_str._Israel 0
Orientia_tsutsugamushi_str._Boryong 3
Rickettsia_bellii_OSU_85-389 4
Rickettsia_heilongjiangensis_054 1
Rickettsia_japonica_YH 1
Rickettsia_australis_str._Cutlack 0
Hyphomicrobium_denitrificans_ATCC_51888 1
Cellvibrio_japonicus_Ueda107 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sp._MR-4 0
Shewanella_frigidimarina_NCIMB_400 1
Pseudoalteromonas_sp._SM9913 1
Alcanivorax_borkumensis_SK2 1
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 0
Pseudoxanthomonas_spadix_BD-a59 0
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 0
Xylella_fastidiosa_M23 0
Xanthomonas_albilineans_GPE_PC73 0
Xanthomonas_campestris_pv._campestris_str._B100 0
Coxiella_burnetii_Dugway_5J108-111 4
Legionella_longbeachae_NSW150 6
Legionella_pneumophila_str._Corby 6
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 2
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2
Pseudomonas_protegens_Pf-5 1
Francisella_novicida_U112 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   23
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   23
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   16
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   11
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   20
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 5
Paracoccidioides_brasiliensis_Pb03_ 5
Coccidioides_posadasii_str._Silveira_ 3
Coccidioides_immitis_RMSCC_3703_ 4
Coccidioides_immitis_RMSCC_2394_ 4
Coccidioides_immitis_H538.4_ 3
Ajellomyces_dermatitidis_ER-3_ 7
Histoplasma_capsulatum_H143 4
Histoplasma_capsulatum_H88 7
Histoplasma_capsulatum_G186AR 8
Aspergillus_fumigatus_A1163_ 7
Candida_albicans_WO-1_ 4
Saccharomyces_cerevisiae_UC5 3
Saccharomyces_cerevisiae_PW5 5
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CLIB324 2
Saccharomyces_cerevisiae_CBS7960 5
Saccharomyces_cerevisiae_YJM269 4
Saccharomyces_cerevisiae_T7 5
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_VL3 3
Saccharomyces_cerevisiae_Vin13 5
Saccharomyces_cerevisiae_LalvinQA23 5
Saccharomyces_cerevisiae_AWRI796 4
Saccharomyces_cerevisiae_Sigma1278b 5
Saccharomyces_cerevisiae_W303 5
Saccharomyces_cerevisiae_JAY291 5
Saccharomyces_cerevisiae_AWRI1631 2
Saccharomyces_cerevisiae_YPS163 2
Saccharomyces_cerevisiae_M22 3
Saccharomyces_cerevisiae_T73 2
Saccharomyces_cerevisiae_CLIB215 5
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 5
Saccharomyces_cerevisiae_YJM789 5
Saccharomyces_cerevisiae_RM11-1a 5
Saccharomyces_cerevisiae_RM11-1a_ 5
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   5
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 11
Batrachochytrium_dendrobatidis_JAM81_ 7
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   24
Hordeum_vulgare_22   (Domesticated barley)   15
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   33
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 6
Plasmodium_falciparum_HB3_ 2
Plasmodium_falciparum_Dd2_ 2
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._ATCC_51142 1
Stanieria_cyanosphaera_PCC_7437 1
Anabaena_cylindrica_PCC_7122 1
Streptomyces_fulvissimus_DSM_40593 1
Chthonomonas_calidirosea_T49 1
Paenibacillus_sp._Y412MC10 1
Singulisphaera_acidiphila_DSM_18658 1
Brachyspira_pilosicoli_WesB 2
Brachyspira_pilosicoli_B2904 3
Brachyspira_pilosicoli_P43/6/78 3
Myxococcus_stipitatus_DSM_14675 2
Pandoraea_pnomenusa_3kgm 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 2
Ralstonia_solanacearum_PSI07 3
Ralstonia_solanacearum_CMR15 2
Ralstonia_solanacearum_GMI1000 2
Burkholderia_lata 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Variovorax_paradoxus_EPS 1
Wolbachia_endosymbiont_of_Drosophila_melanogaster 4
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 8
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 11
Ehrlichia_muris_AS145 1
Ehrlichia_ruminantium_str._Welgevonden 0
Ehrlichia_ruminantium_str._Welgevonden 0
Anaplasma_phagocytophilum_str._Dog2 0
Anaplasma_phagocytophilum_str._HZ2 0
Anaplasma_phagocytophilum_str._JM 0
Anaplasma_marginale_str._St._Maries 0
Orientia_tsutsugamushi_str._Ikeda 3
Rickettsia_bellii_RML369-C 5
Sinorhizobium_meliloti_Rm41 1
Rhodopseudomonas_palustris_TIE-1 1
Vibrio_fischeri_ES114 1
Vibrio_sp._EJY3 1
Shewanella_baltica_OS117 0
Shewanella_baltica_OS155 0
Alteromonas_macleodii_ATCC_27126 1
Thalassolituus_oleivorans_MIL-1 2
Stenotrophomonas_maltophilia_D457 0
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xylella_fastidiosa_subsp._fastidiosa_GB514 0
Xylella_fastidiosa_M12 0
Xylella_fastidiosa_Temecula1 0
Xylella_fastidiosa_9a5c 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 0
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Thioalkalivibrio_nitratireducens_DSM_14787 1
Coxiella_burnetii_CbuK_Q154 3
Coxiella_burnetii_CbuG_Q212 1
Coxiella_burnetii_RSA_331 2
Coxiella_burnetii_RSA_493 2
Legionella_pneumophila_str._Paris 10
Legionella_pneumophila_str._Lens 8
Legionella_pneumophila_subsp._pneumophila_LPE509 6
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 6
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 6
Legionella_pneumophila_subsp._pneumophila 6
Legionella_pneumophila_subsp._pneumophila 8
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 6
Legionella_pneumophila_2300/99_Alcoy 5
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 2
Escherichia_coli_042 1
Escherichia_coli_Xuzhou21 1
Escherichia_coli_UMN026 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   27
Pan_troglodytes_69_2.1.4   (Chimpanzee)   18
Gorilla_gorilla_69_3.1   (Western gorilla)   17
Pongo_abelii_69_2   (Sumatran orangutan)   16
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   16
Macaca_mulatta_69_1   (Rhesus monkey)   16
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   19
Otolemur_garnettii_69_3   (Small-eared galago)   18
Microcebus_murinus_69_1   (Gray mouse lemur)   16
Rattus_norvegicus_69_3.4   (Norway rat)   15
Mus_musculus_69_38   (House mouse)   17
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   14
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   12
Cavia_porcellus_69_3   (Domestic guinea pig)   14
Oryctolagus_cuniculus_69_2   (Rabbit)   17
Ochotona_princeps_69   (American pika)   16
Tupaia_belangeri_69   (Northern tree shrew)   9
Sus_scrofa_69_10.2   (Pig)   19
Bos_taurus_69_3.1   (Cattle)   15
Vicugna_pacos_69_1   (Alpaca)   7
Tursiops_truncatus_69_1   (Bottlenose dolphin)   17
Mustela_putorius_furo_69_1.0   (Domestic ferret)   13
Ailuropoda_melanoleuca_69_1   (Giant panda)   19
Canis_familiaris_69_3.1   (Dog)   19
Felis_catus_69   (Domestic cat)   16
Equus_caballus_69_2   (Horse)   13
Myotis_lucifugus_69_2.0   (Little brown bat)   12
Pteropus_vampyrus_69_1   (Large flying fox)   20
Sorex_araneus_69_1   (European shrew)   6
Erinaceus_europaeus_69   (Western European hedgehog)   12
Procavia_capensis_69_1   (Cape rock hyrax)   16
Loxodonta_africana_69_3   (African savanna elephant)   16
Echinops_telfairi_69   (Small Madagascar hedgehog)   20
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   17
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   9
Macropus_eugenii_69_1.0   (Tammar wallaby)   14
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   9
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   15
Ornithorhynchus_anatinus_69_5   (Platypus)   13
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   13
Gallus_gallus_69_2   (Chicken)   10
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   13
Anolis_carolinensis_69_2.0   (Green anole)   9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   13
Latimeria_chalumnae_69_1   (Coelacanth)   16
Gadus_morhua_69_1   (Atlantic cod)   12
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11
Takifugu_rubripes_69_4   (Torafugu)   11
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   10
Oryzias_latipes_69_1   (Japanese medaka)   9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   13
Oreochromis_niloticus_69_1.0   (Nile tilapia)   16
Danio_rerio_69_9   (Zebrafish)   19
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_69   (Vase tunicate)   4
Drosophila_melanogaster_69_5   (Fruit fly)   12
Caenorhabditis_elegans_69_215   (Roundworm)   13
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   5
Arabidopsis_thaliana_10   (Thale cress)   21

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   69
Homo_sapiens__(NCBI_version)   (Human)   38
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   17
Loa_loa_v3.3_(Request)   (Eye worm)   6
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   7
Moniliophthora_perniciosa_FA553__(Genome_survey) 1
Encephalitozoon_intestinalis__(endoparasite) 1
Encephalitozoon_cuniculi_(endoparasite) 1
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   60
Ricinus_communis__(Early_assembly)   (Castor bean)   12
Nicotiana_benthamiana_0.4.4_(Early_draft) 17
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   11
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   12
Phoenix_dactylifera__(Early_draft)   (Date palm)   3
NCBI_plasmid_sequences_(Plasmids) 12
STRING_v9.0.5_(STRING) 1610
Uniprot_2018_03_genome 111885
NCBI_2017_08_genome 26006
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3
PDB_chains_(SCOP_1.75)_(PDB) 1
Protein_Data_Bank_(all_PDB_sequenc) 76
NCBI_viral_sequences_(Viral) 196
UniProt__viral_sequences_(Viral) 226
TargetDB__(Targets) 48
Protozoadb_2010_08_(Protozoadb) 453

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