SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,48452,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   35
Pan_troglodytes_76_2.1.4   (Chimpanzee)   14
Gorilla_gorilla_76_3.1   (Western gorilla)   22
Pongo_abelii_76_2   (Sumatran orangutan)   9
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   14
Papio_anubis_76   (Olive baboon)   25
Macaca_mulatta_76_1   (Rhesus monkey)   24
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   29
Otolemur_garnettii_76_3   (Small-eared galago)   14
Microcebus_murinus_76_1   (Gray mouse lemur)   17
Rattus_norvegicus_76_5.0   (Norway rat)   20
Mus_musculus_76_38   (House mouse)   31
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   16
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   14
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   12
Cavia_porcellus_76_3   (Domestic guinea pig)   14
Oryctolagus_cuniculus_76_2   (Rabbit)   14
Ochotona_princeps_76   (American pika)   17
Tupaia_belangeri_76   (Northern tree shrew)   15
Sus_scrofa_76_10.2   (Pig)   13
Bos_taurus_76_3.1   (Cattle)   16
Ovis_aries_76_3.1   (Sheep)   18
Vicugna_pacos_76_1   (Alpaca)   12
Tursiops_truncatus_76_1   (Bottlenose dolphin)   13
Mustela_putorius_furo_76_1.0   (Domestic ferret)   12
Ailuropoda_melanoleuca_76_1   (Giant panda)   13
Canis_familiaris_76_3.1   (Dog)   28
Felis_catus_76_6.2   (Domestic cat)   14
Equus_caballus_76_2   (Horse)   15
Myotis_lucifugus_76_2.0   (Little brown bat)   17
Pteropus_vampyrus_76_1   (Large flying fox)   14
Sorex_araneus_76_1   (European shrew)   8
Erinaceus_europaeus_76   (Western European hedgehog)   15
Procavia_capensis_76_1   (Cape rock hyrax)   15
Loxodonta_africana_76_3   (African savanna elephant)   17
Echinops_telfairi_76   (Small Madagascar hedgehog)   12
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   15
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   18
Macropus_eugenii_76_1.0   (Tammar wallaby)   14
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   21
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   19
Ornithorhynchus_anatinus_76_5   (Platypus)   13
Saccoglossus_kowalevskii_v3.0 23
Petromyzon_marinus_76_7.0   (Sea lamprey)   7
Meleagris_gallopavo_76_2   (Turkey)   13
Gallus_gallus_76_4   (Chicken)   15
Anas_platyrhynchos_76_1.0   (Mallard)   13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   9
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   17
Anolis_carolinensis_76_2.0   (Green anole)   13
Xenopus_laevis_   (African clawed frog)   29
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   22
Latimeria_chalumnae_76_1   (Coelacanth)   20
Lepisosteus_oculatus_76   (Spotted gar)   26
Gadus_morhua_76_1   (Atlantic cod)   15
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   20
Takifugu_rubripes_76_4   (Torafugu)   34
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   23
Oryzias_latipes_76_1   (Japanese medaka)   14
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   14
Poecilia_formosa_76   (Amazon molly)   15
Oreochromis_niloticus_76_1.0   (Nile tilapia)   23
Astyanax_mexicanus_76   (Mexican tetra)   15
Danio_rerio_76_9   (Zebrafish)   27
Oikopleura_dioica 8
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   10
Ciona_intestinalis_76   (Vase tunicate)   5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   12
Adineta_vaga 22
Octopus_bimaculoides_280 11
Crassostrea_gigas_22   (Pacific oyster)   12
Lottia_gigantea_   (Owl limpet)   8
Helobdella_robusta_ 14
Capitella_sp._I_ 21
Danaus_plexippus_OGS1.0   (Monarch butterfly)   8
Heliconius_melpomene_   (Postman butterfly)   8
Bombyx_mori_   (Domestic silkworm)   4
Nasonia_vitripennis_   (Jewel wasp)   13
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   7
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   13
Linepithema_humile_v1.1   (Argentine ant)   13
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   12
Solenopsis_invicta_v.2.2.3   (Red fire ant)   11
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   13
Atta_cephalotes_v1.1 7
Camponotus_floridanus_v3.3   (Florida carpenter ant)   13
Lucilia_cuprina   (Australian sheep blowfly)   11
Drosophila_grimshawi_1.3 10
Drosophila_willistoni_1.3 12
Drosophila_pseudoobscura_2.13 9
Drosophila_persimilis_1.3 11
Drosophila_suzukii 11
Drosophila_yakuba_1.3 8
Drosophila_simulans_1.3 10
Drosophila_sechellia_1.3 8
Drosophila_melanogaster_76_5   (Fruit fly)   14
Drosophila_erecta_1.3 10
Drosophila_ananassae_1.3 11
Drosophila_virilis_1.2 12
Drosophila_mojavensis_1.3 10
Megaselia_scalaris_22 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   7
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   8
Anopheles_darlingi_22   (American malaria mosquito)   4
Anopheles_gambiae_49_3j   (African malaria mosquito)   8
Tribolium_castaneum_3.0   (Red flour beetle)   11
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   8
Acyrthosiphon_pisum_   (Pea aphid)   6
Rhodnius_prolixus_22 8
Daphnia_pulex_   (Common water flea)   10
Strigamia_maritima_22 14
Sarcoptes_scabiei 4
Tetranychus_urticae_   (Two-spotted spider mite)   8
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Pristionchus_pacificus_ 4
Meloidogyne_incognita_   (Southern root-knot nematode)   8
Meloidogyne_hapla_ 4
Onchocerca_volvulus_22 6
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   9
Caenorhabditis_japonica_ 5
Caenorhabditis_brenneri_ 7
Caenorhabditis_remanei_ 7
Caenorhabditis_elegans_76_235   (Roundworm)   9
Caenorhabditis_briggsae_2 4
Trichinella_spiralis_22 9
Hymenolepis_microstoma_ 10
Echinococcus_multilocularis_ 8
Echinococcus_granulosus_ 7
Taenia_solium_   (Pork tapeworm)   7
Schistosoma_mansoni_ 13
Mnemiopsis_leidyi   (Sea walnut)   7
Thelohanellus_kitauei 3
Acropora_digitifera_v1.0 9
Nematostella_vectensis_1.0   (Starlet sea anemone)   10
Hydra_vulgaris 10
Amphimedon_queenslandica 13
Trichoplax_adhaerens_ 10
Proterospongia_sp._ATCC_50818_ 9
Monosiga_brevicollis_ 10
Sphaeroforma_arctica_JP610_ 9
Capsaspora_owczarzaki_ATCC_30864_ 7
Conidiobolus_coronatus_NRRL28638_v1.0 4
Mortierella_verticillata_NRRL_6337_ 11
Phycomyces_blakesleeanus_ 17
Rhizopus_oryzae_RA_99-880_ 10
Mucor_circinelloides_ 15
Rhizomucor_miehei_CAU432_ 11
Malassezia_globosa_CBS_7966_ 14
Sporisorium_reilianum_22 8
Ustilago_maydis_ 10
Mixia_osmundae_IAM_14324_v1.0 8
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 4
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 8
Melampsora_laricis-populina_ 4
Rhodotorula_graminis_WP1_v1.0 11
Sporobolomyces_roseus_IAM_13481_ 11
Microbotryum_violaceum_22 7
Wallemia_sebi_v1.0 6
Sphaerobolus_stellatus_v1.0 13
Piloderma_croceum_F_1598_v1.0 13
Serpula_lacrymans_var._lacrymans_S7.9_ 5
Coniophora_puteana 10
Hydnomerulius_pinastri_v2.0 10
Paxillus_rubicundulus_Ve08.2h10_v1.0 9
Pisolithus_microcarpus_441_v1.0 9
Pisolithus_tinctorius_Marx_270_v1.0 19
Scleroderma_citrinum_Foug_A_v1.0 11
Coprinopsis_cinerea_okayama7_130_v3 16
Pleurotus_ostreatus_   (Oyster mushroom)   8
Amanita_thiersii_Skay4041_v1.0 6
Amanita_muscaria_Koide_v1.0   (Fly agaric)   13
Galerina_marginata_v1.0 19
Hebeloma_cylindrosporum_h7_v2.0 8
Laccaria_bicolor_S238N-H82_ 12
Agaricus_bisporus_var._bisporus_ 6
Schizophyllum_commune_ 8
Stereum_hirsutum_FP-91666_SS1__v1.0 8
Heterobasidion_annosum_ 9
Gloeophyllum_trabeumv1.0 9
Punctularia_strigosozonata_v1.0 9
Sebacina_vermifera_MAFF_305830_v1.0 15
Fomitiporia_mediterranea_v1.0 11
Tulasnella_calospora_AL13/4D_v1.0 9
Postia_placenta_ 8
Wolfiporia_cocos_MD-104_SS10__v1.0 9
Fomitopsis_pinicolav1.0 14
Fomitopsis_pinicola_FP-58527_SS1_v3.0 12
Phanerochaete_chrysosporium_RP-78_2.1 7
Dichomitus_squalens 7
Trametes_versicolor_v1.0 7
Tremella_mesenterica_   (Witches' butter)   7
Daldinia_eschscholzii_EC12_v1.0 7
Apiospora_montagnei_NRRL_25634_v1.0 9
Magnaporthe_poae_ATCC_64411_22 8
Magnaporthe_grisea_70-15_ 10
Podospora_anserina_ 11
Sporotrichum_thermophile_ATCC_42464_ 8
Thielavia_terrestris_NRRL_8126_ 8
Chaetomium_globosum_CBS_148.51_ 11
Neurospora_tetrasperma_ 8
Neurospora_discreta_FGSC_8579_ 7
Neurospora_crassa_OR74A_ 10
Cryphonectria_parasitica_   (Chestnut blight fungus)   9
Verticillium_albo-atrum_VaMs.102_ 12
Verticillium_dahliae_VdLs.17_ 13
Acremonium_alcalophilumv_1.0 9
Glomerella_graminicola_22 8
Fusarium_graminearum_ 8
Nectria_haematococca_mpVI_ 12
Fusarium_oxysporum_f._sp._lycopersici_4286_ 14
Fusarium_verticillioides_7600_ 8
Trichoderma_asperellum_CBS_433.97_v1.0 11
Trichoderma_atroviride_ 8
Trichoderma_citrinoviride_v1.0 10
Trichoderma_reesei_1.2 10
Trichoderma_virens_Gv29-8_ 8
Trichoderma_longibrachiatum_ATCC_18648_v1.0 8
Trichoderma_harzianum_CBS_226.95_v1.0 10
Amorphotheca_resinae_v1.0   (Creosote fungus)   11
Botrytis_cinerea_B05.10_ 8
Sclerotinia_sclerotiorum_ 9
Blumeria_graminis_22 8
Didymella_exigua_CBS_183.55_v1.0 6
Leptosphaeria_maculans_22 5
Setosphaeria_turcica_v1.0 9
Cochliobolus_miyabeanus_ATCC_44560_v1.0 11
Cochliobolus_victoriae_FI3_v1.0 13
Cochliobolus_carbonum_26-R-13_v1.0 14
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   12
Alternaria_brassicicola_ 10
Cochliobolus_lunatus_m118_v2.0 11
Pyrenophora_teres_f._teres_22 9
Pyrenophora_tritici-repentis_ 10
Stagonospora_nodorum_ 9
Mycosphaerella_graminicola_IPO323_ 10
Zasmidium_cellare_ATCC_36951_v1.0 11
Dothistroma_septosporum 8
Septoria_musiva_v1.0 10
Mycosphaerella_fijiensis_CIRAD86_ 5
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 7
Paracoccidioides_brasiliensis_Pb18_ 8
Coccidioides_posadasii_RMSCC_3488_ 8
Coccidioides_immitis_RS_ 8
Ajellomyces_dermatitidis_SLH14081_ 7
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 7
Microsporum_canis_CBS_113480_ 8
Trichophyton_equinum_CBS_127.97_ 8
Trichophyton_verrucosum_HKI_0517_ 5
Arthroderma_benhamiae_CBS_112371_ 2
Trichophyton_tonsurans_CBS_112818_ 6
Trichophyton_rubrum_CBS_118892_ 5
Uncinocarpus_reesii_1704_ 8
Aspergillus_zonatus_v1.0 6
Penicillium_chrysogenum_Wisconsin_54-1255_ 10
Penicillium_chrysogenum_v1.0 8
Aspergillus_acidus_v1.0 6
Aspergillus_fumigatus_Af293 5
Aspergillus_brasiliensis_v1.0 6
Aspergillus_nidulans_FGSC_A4_ 9
Aspergillus_sydowii_v1.0 9
Aspergillus_versicolor_v1.0 9
Aspergillus_glaucus 8
Aspergillus_carbonarius_ITEM_5010_ 8
Neosartorya_fischeri_NRRL_181_ 8
Aspergillus_terreus_NIH2624_ 10
Aspergillus_tubingensis_v1.0 5
Aspergillus_wentii_v1.0 8
Aspergillus_oryzae_RIB40_ 7
Aspergillus_niger_22 7
Aspergillus_niger_ATCC_1015_ 5
Aspergillus_flavus_NRRL3357_ 9
Aspergillus_clavatus_NRRL_1_ 8
Penicillium_marneffei_ATCC_18224_ 8
Tuber_melanosporum_Mel28_22 8
Tuber_melanosporum_Vittad_   (Perigord truffle)   8
Hansenula_polymorpha_v2.0 8
Dekkera_bruxellensis_CBS_2499_v2.0 9
Pichia_membranifaciensv1.0 6
Candida_tanzawaensis_NRRL_Y-17324__v1.0 10
Candida_dubliniensis_CD36_ 9
Candida_tropicalis_MYA-3404_ 11
Candida_parapsilosis_ 7
Candida_albicans_SC5314 8
Lodderomyces_elongisporus_NRRL_YB-4239_ 8
Babjeviella_inositovora_NRRL_Y-12698_v1.0 6
Pichia_stipitis_CBS_6054_ 9
Candida_guilliermondii_ATCC_6260_ 8
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 8
Debaromyces_hansenii 8
Wickerhamomyces_anomalus 8
Pichia_pastoris_GS115_ 8
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3
Yarrowia_lipolytica_CLIB122 8
Candida_lusitaniae_ATCC_42720_ 8
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 9
Vanderwaltozyma_polyspora_DSM_70294_ 10
Candida_glabrata_CBS138 10
Kluyveromyces_thermotolerans_CBS_6340 8
Lachancea_kluyveri_ 9
Kluyveromyces_waltii 8
Ashbya_gossypii_ATCC_10895_ 6
Zygosaccharomyces_rouxii_ 7
Saccharomyces_mikatae_MIT 10
Saccharomyces_paradoxus_MIT 13
Saccharomyces_cerevisiae_76   (Baker's yeast)   13
Saccharomyces_bayanus_MIT 13
Kluyveromyces_lactis 9
Schizosaccharomyces_cryophilus_OY26_22 6
Schizosaccharomyces_octosporus_yFS286_ 5
Schizosaccharomyces_japonicus_yFS275_ 5
Schizosaccharomyces_pombe   (Fission yeast)   4
Catenaria_anguillulae_PL171_v1.0 8
Allomyces_macrogynus_ATCC_38327_ 17
Spizellomyces_punctatus_DAOM_BR117_ 19
Dictyostelium_discoideum 14
Dictyostelium_purpureum_ 14
Entamoeba_dispar_1.2 5
Entamoeba_invadens_1.2 6
Entamoeba_histolytica_1 7
Selaginella_moellendorffii_ 122
Pinus_taeda   (Loblolly pine)   66
Picea_abies   (Norway spruce)   188
Eucalyptus_grandis_v201   (Rose gum)   66
Theobroma_cacao_B97-61/B2_v1   (Cacao)   58
Gossypium_raimondii_v221 109
Citrus_clementina_v165 55
Citrus_sinensis_v154   (Sweet orange)   84
Thellungiella_halophila_v173 83
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   63
Capsella_rubella_v183 70
Arabidopsis_lyrata_   (Lyrate rockcress)   68
Arabidopsis_thaliana_10   (Thale cress)   75
Carica_papaya_   (Papaya)   43
Medicago_truncatula_   (Barrel medic)   104
Phaseolus_vulgaris_v186   (French bean)   70
Glycine_max_v109   (Soybean)   100
Cucumis_sativus_v122   (Cucumber)   78
Fragaria_vesca_   (Wild strawberry)   44
Malus_domestica_v196   (Apple)   89
Prunus_persica_v139   (Peach)   55
Linum_usitatissimum_v200   (Flax)   77
Manihot_esculenta_v147   (Cassava)   64
Populus_trichocarpa_v156   (Black cottonwood)   79
Vitis_vinifera_   (Wine grape)   53
Mimulus_guttatus_v140   (Spotted monkey flower)   52
Solanum_lycopersicum_v.2.3   (Tomato)   67
Solanum_tuberosum_   (Potato)   82
Actinidia_chinensis_Hongyang_ 51
Aquilegia_coerulea_v195 98
Triticum_urartu_22 45
Triticum_aestivum_22   (Bread wheat)   82
Aegilops_tauschii_22 53
Brachypodium_distachyon_   (Stiff brome)   60
Oryza_barthii_22   (African wild rice)   62
Oryza_meridionalis_22 86
Oryza_glumaepatula_22 83
Oryza_glaberrima   (African rice)   47
Oryza_punctata_22 85
Oryza_nivara_22 99
Oryza_brachyantha_22   (Malo sina)   41
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   70
Oryza_sativa_v193   (Rice)   70
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   66
Panicum_virgatum_v202   (Switchgrass)   91
Setaria_italica_v164   (Foxtail millet)   59
Zea_mays_subsp._mays_   (Maize)   64
Zea_mays_v181   (Maize)   68
Sorghum_bicolor_   (Sorghum)   44
Musa_balbisiana   (Balbis banana)   66
Musa_acuminata_22   (Wild Malaysian banana)   50
Amborella_trichopoda_22 43
Physcomitrella_patens 24
Coccomyxa_subellipsoidea_sp._C-169_v2 8
Asterochloris_sp._Cgr/DA1pho_v1.0 11
Chlorella_variabilis_sp._NC64A_ 7
Chlorella_vulgaris_ 10
Volvox_carteri_f._nagariensis_ 14
Volvox_carteri_v199 15
Chlamydomonas_reinhardtii_4.0 4
Ostreococcus_sp._RCC809_ 6
Ostreococcus_lucimarinus_CCE9901_ 9
Ostreococcus_tauri_ 3
Bathycoccus_prasinos_ 6
Micromonas_sp._RCC299_ 5
Micromonas_pusilla_CCMP1545_v3.0 4
Cyanidioschyzon_merolae_strain_10D_22 5
Cyanidioschyzon_merolae 5
Porphyridium_purpureum_02_2012 10
Thecamonas_trahens_ATCC_50062_ 10
Bigelowiella_natans_CCMP2755_22 16
Giardia_lamblia_2.3 3
Cyanophora_paradoxa_ 8
Leishmania_mexicana_2.4 15
Leishmania_major_strain_Friedlin_ 15
Leishmania_infantum_JPCM5_2.4 16
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 18
Trypanosoma_vivax_ 8
Trypanosoma_cruzi_strain_CL_Brener 7
Trypanosoma_congolense_2.4 10
Trypanosoma_brucei_gambiense_v4.1 10
Trypanosoma_brucei_TREU927_v4.1 8
Ectocarpus_siliculosus 19
Aureococcus_anophagefferens_ 9
Albugo_laibachii_22 15
Pythium_iwayamai_DAOM_BR242034_22 15
Pythium_arrhenomanes_ATCC_12531_22 11
Pythium_ultimum_v1.7-2 13
Pythium_aphanidermatum_DAOM_BR444_22 10
Pythium_irregulare_DAOM_BR486_22 17
Pythium_vexans_DAOM_BR484_22 14
Phytophthora_ramorum_1.1   (Sudden oak death agent)   7
Phytophthora_sojae_1.1 11
Phytophthora_infestans_T30-4_ 11
Phytophthora_capsici_ 7
Hyaloperonospora_arabidopsidis_22 6
Phaeodactylum_tricornutumCCAP_1055/1 6
Fragilariopsis_cylindrus 12
Thalassiosira_pseudonana_CCMP1335 10
Perkinsus_marinus_ATCC_50983_ 8
Paramecium_tetraurelia_ 40
Tetrahymena_thermophila_SB210_1_ 62
Ichthyophthirius_multifiliis_strain_G5_ 4
Cryptosporidium_hominis 5
Cryptosporidium_muris 3
Cryptosporidium_parvum_Iowa_II 5
Neospora_caninum 12
Toxoplasma_gondii_VEG 12
Toxoplasma_gondii_ME49 13
Toxoplasma_gondii_GT1 15
Babesia_bovis_T2Bo_ 6
Theileria_parva__ 2
Theileria_annulata 3
Plasmodium_falciparum_3D7_ 5
Plasmodium_vivax_SaI-1_7.0 8
Plasmodium_knowlesi_strain_H_ 9
Plasmodium_yoelii_ssp._yoelii_1_ 9
Plasmodium_chabaudi_ 9
Plasmodium_berghei_ANKA_ 8
Symbiodinium_minutum_clade_B1_v1.2 35
Naegleria_gruberi_ 21
Trichomonas_vaginalis_ 11
Guillardia_theta_CCMP2712_v1.0_ 28
Emiliania_huxleyi_CCMP1516_ 8
Leptolyngbya_sp._PCC_7376 4
Pseudanabaena_sp._PCC_7367 2
Acaryochloris_marina_MBIC11017 2
Synechocystis_sp._PCC_6803 1
Thermosynechococcus_sp._NK55 1
Thermosynechococcus_elongatus_BP-1 1
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._PCC_6312 1
Microcoleus_sp._PCC_7113 4
Trichodesmium_erythraeum_IMS101 0
Geitlerinema_sp._PCC_7407 2
Cyanothece_sp._PCC_8802 2
cyanobacterium_UCYN-A 1
Halothece_sp._PCC_7418 2
Gloeobacter_violaceus_PCC_7421 2
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 2
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 2
Anabaena_sp._90 1
Conexibacter_woesei_DSM_14684 0
Slackia_heliotrinireducens_DSM_20476 1
Thermobispora_bispora_DSM_43833 1
Nakamurella_multipartita_DSM_44233 0
Modestobacter_marinus 1
Geodermatophilus_obscurus_DSM_43160 1
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_symbiont_of_Datisca_glomerata 0
Frankia_sp._EAN1pec 3
Frankia_alni_ACN14a 0
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 1
Pseudonocardia_dioxanivorans_CB1190 0
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 3
Kribbella_flavida_DSM_17836 0
Propionibacterium_propionicum_F0230a 1
Microlunatus_phosphovorus_NM-1 0
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 3
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 2
Rhodococcus_jostii_RHA1 1
Rhodococcus_opacus_B4 0
Nocardia_cyriacigeorgica_GUH-2 0
Nocardia_farcinica_IFM_10152 0
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_avium_104 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_canettii_CIPT_140010059 0
Mycobacterium_africanum_GM041182 0
Mycobacterium_tuberculosis_KZN_1435 0
Mycobacterium_tuberculosis 0
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_marinum_M 1
Mycobacterium_smegmatis_str._MC2_155 1
Beutenbergia_cavernae_DSM_12333 0
Intrasporangium_calvum_DSM_43043 0
Isoptericola_variabilis_225 0
Xylanimonas_cellulosilytica_DSM_15894 0
Cellulomonas_flavigena_DSM_20109 2
Cellulomonas_fimi_ATCC_484 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_sp._Rue61a 0
Arthrobacter_sp._FB24 1
Renibacterium_salmoninarum_ATCC_33209 1
Gardnerella_vaginalis_409-05 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1
Bifidobacterium_bifidum_S17 1
Bifidobacterium_adolescentis_ATCC_15703 1
Actinomyces_sp._F0330 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Anaerolinea_thermophila_UNI-1 0
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 0
Truepera_radiovictrix_DSM_17093 3
Deinococcus_gobiensis_I-0 3
Deinococcus_deserti_VCD115 0
Deinococcus_maricopensis_DSM_21211 2
Deinococcus_geothermalis_DSM_11300 1
Deinococcus_proteolyticus_MRP 3
Deinococcus_radiodurans_R1 0
Oceanithermus_profundus_DSM_14977 2
Marinithermus_hydrothermalis_DSM_14884 2
Meiothermus_silvanus_DSM_9946 3
Meiothermus_ruber_DSM_1279 3
Thermus_sp._CCB_US3_UF1 2
Thermus_scotoductus_SA-01 2
Thermus_thermophilus_HB27 3
Selenomonas_sputigena_ATCC_35185 0
Eubacterium_siraeum 0
Ruminococcus_sp. 1
Oscillibacter_valericigenes_Sjm18-20 0
Pelotomaculum_thermopropionicum_SI 1
Desulfitobacterium_hafniense_Y51 1
Desulfotomaculum_kuznetsovii_DSM_6115 1
Coprococcus_sp._ART55/1 1
Roseburia_intestinalis 0
Alkaliphilus_metalliredigens_QYMF 1
Clostridium_tetani_E88 1
Clostridium_acetobutylicum_ATCC_824 0
Thermodesulfobium_narugense_DSM_14796 1
Coprothermobacter_proteolyticus_DSM_5265 0
Tepidanaerobacter_acetatoxydans_Re1 1
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_polymyxa_M1 0
Bacillus_cellulosilyticus_DSM_2522 0
Candidatus_Cloacamonas_acidaminovorans 1
Gemmatimonas_aurantiaca_T-27 5
Melioribacter_roseus_P3M 2
Ignavibacterium_album_JCM_16511 0
Pelodictyon_phaeoclathratiforme_BU-1 0
Chlorobium_chlorochromatii_CaD3 1
Chlorobium_phaeobacteroides_DSM_266 0
Chlorobium_phaeovibrioides_DSM_265 0
Chloroherpeton_thalassium_ATCC_35110 3
Haliscomenobacter_hydrossis_DSM_1100 32
Saprospira_grandis_str._Lewin 2
Niastella_koreensis_GR20-10 77
Chitinophaga_pinensis_DSM_2588 47
Salinibacter_ruber_M8 2
Rhodothermus_marinus_DSM_4252 3
Flexibacter_litoralis_DSM_6794 3
Candidatus_Cardinium_hertigii 1
Belliella_baltica_DSM_15883 4
Cyclobacterium_marinum_DSM_745 47
Marivirga_tractuosa_DSM_4126 2
Fibrella_aestuarina 39
Leadbetterella_byssophila_DSM_17132 27
Dyadobacter_fermentans_DSM_18053 62
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 40
Runella_slithyformis_DSM_19594 29
Parabacteroides_distasonis_ATCC_8503 43
Tannerella_forsythia_ATCC_43037 32
Paludibacter_propionicigenes_WB4 10
Odoribacter_splanchnicus_DSM_20712 11
Bacteroides_sp._CF50 6
Prevotella_melaninogenica_ATCC_25845 21
Prevotella_intermedia_17 4
Prevotella_denticola_F0289 18
Prevotella_ruminicola_23 29
Porphyromonas_asaccharolytica_DSM_20707 2
Alistipes_finegoldii_DSM_17242 25
Bacteroides_salanitronis_DSM_18170 24
Bacteroides_helcogenes_P_36-108 38
Bacteroides_vulgatus_ATCC_8482 56
Bacteroides_thetaiotaomicron_VPI-5482 86
Bacteroides_fragilis_YCH46 52
Pedobacter_saltans_DSM_12145 38
Solitalea_canadensis_DSM_3403 14
Pedobacter_heparinus_DSM_2366 61
Sphingobacterium_sp._21 65
Fluviicola_taffensis_DSM_16823 2
Owenweeksia_hongkongensis_DSM_17368 0
Zunongwangia_profunda_SM-A87 34
Krokinobacter_sp._4H-3-7-5 3
Gramella_forsetii_KT0803 5
Lacinutrix_sp._5H-3-7-4 1
Maribacter_sp._HTCC2170 7
Robiginitalea_biformata_HTCC2501 3
Aequorivita_sublithincola_DSM_14238 0
Zobellia_galactanivorans 44
Muricauda_ruestringensis_DSM_13258 10
Cellulophaga_algicola_DSM_14237 12
Cellulophaga_lytica_DSM_7489 10
Flavobacteriaceae_bacterium_3519-10 3
Polaribacter_sp._MED152 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Ornithobacterium_rhinotracheale_DSM_15997 9
Capnocytophaga_canimorsus_Cc5 5
Capnocytophaga_ochracea_DSM_7271 10
Weeksella_virosa_DSM_16922 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 2
Flavobacterium_columnare_ATCC_49512 0
Flavobacterium_johnsoniae_UW101 21
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Candidatus_Protochlamydia_amoebophila_UWE25 3
Simkania_negevensis_Z 2
Chlamydophila_pecorum_E58 1
Chlamydia_muridarum_Nigg 1
Chlamydophila_pneumoniae_TW-183 1
Phycisphaera_mikurensis_NBRC_102666 1
Isosphaera_pallida_ATCC_43644 2
Planctomyces_brasiliensis_DSM_5305 2
Planctomyces_limnophilus_DSM_3776 5
Rhodopirellula_baltica_SH_1 4
Pirellula_staleyi_DSM_6068 5
Opitutus_terrae_PB90-1 4
Turneriella_parva_DSM_21527 3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2
Leptospira_interrogans_serovar_Lai_str._IPAV 4
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_murdochii_DSM_12563 0
Brachyspira_intermedia_PWS/A 1
Brachyspira_hyodysenteriae_WA1 1
Borrelia_recurrentis_A1 1
Borrelia_crocidurae_str._Achema 1
Spirochaeta_smaragdinae_DSM_11293 1
Sphaerochaeta_pleomorpha_str._Grapes 0
Sphaerochaeta_globus_str._Buddy 2
Spirochaeta_caldaria_DSM_7334 2
Treponema_azotonutricium_ZAS-9 2
Treponema_primitia_ZAS-2 2
Treponema_brennaborense_DSM_12168 0
Treponema_paraluiscuniculi_Cuniculi_A 2
Treponema_pallidum_subsp._pallidum_SS14 4
Treponema_denticola_ATCC_35405 1
Spirochaeta_africana_DSM_8902 1
Spirochaeta_thermophila_DSM_6192 1
Thermodesulfatator_indicus_DSM_15286 1
Thermodesulfobacterium_sp._OPB45 2
Desulfurispirillum_indicum_S5 1
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 0
Deferribacter_desulfuricans_SSM1 2
Kosmotoga_olearia_TBF_19.5.1 0
Fervidobacterium_pennivorans_DSM_9078 0
Thermotoga_lettingae_TMO 0
Thermotoga_thermarum_DSM_5069 0
Thermotoga_sp._RQ2 0
Thermotoga_naphthophila_RKU-10 0
Thermotoga_petrophila_RKU-1 0
Thermotoga_maritima_MSB8 0
Thermovibrio_ammonificans_HB-1 1
Persephonella_marina_EX-H1 1
Hydrogenobaculum_sp._SN 1
Hydrogenobaculum_sp._HO 1
Dictyoglomus_turgidum_DSM_6724 0
Dictyoglomus_thermophilum_H-6-12 0
Candidatus_Chloracidobacterium_thermophilum_B 1
Candidatus_Solibacter_usitatus_Ellin6076 8
Granulicella_tundricola_MP5ACTX9 2
Granulicella_mallensis_MP5ACTX8 2
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 2
Terriglobus_roseus_DSM_18391 1
Leptospirillum_ferrooxidans_C2-3 1
Streptobacillus_moniliformis_DSM_12112 1
Sebaldella_termitidis_ATCC_33386 0
Acidithiobacillus_ferrivorans_SS3 1
Acidithiobacillus_caldus_SM-1 2
Bacteriovorax_marinus_SJ 2
Bdellovibrio_bacteriovorus_HD100 3
Nautilia_profundicola_AmH 1
Arcobacter_butzleri_RM4018 1
Campylobacter_lari_RM2100 1
Sulfurimonas_denitrificans_DSM_1251 1
Helicobacter_bizzozeronii_CIII-1 1
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_mustelae_12198 0
Desulfarculus_baarsii_DSM_2075 1
Desulfobacca_acetoxidans_DSM_11109 0
Syntrophus_aciditrophicus_SB 1
Desulfomonile_tiedjei_DSM_6799 0
Desulfotalea_psychrophila_LSv54 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 3
Desulfococcus_oleovorans_Hxd3 1
Desulfohalobium_retbaense_DSM_5692 2
Desulfomicrobium_baculatum_DSM_4028 2
Desulfovibrio_piezophilus 1
Desulfovibrio_aespoeensis_Aspo-2 1
Lawsonia_intracellularis_PHE/MN1-00 1
Desulfovibrio_magneticus_RS-1 2
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 2
Desulfovibrio_salexigens_DSM_2638 3
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 2
Desulfovibrio_africanus_str._Walvis_Bay 2
Geobacter_sp._M21 2
Geobacter_uraniireducens_Rf4 1
Geobacter_lovleyi_SZ 0
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 1
Haliangium_ochraceum_DSM_14365 5
Sorangium_cellulosum_'So_ce_56' 6
Anaeromyxobacter_sp._Fw109-5 4
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 7
Myxococcus_xanthus_DK_1622 10
Myxococcus_fulvus_HW-1 5
Azoarcus_sp._KH32C 0
Dechlorosoma_suillum_PS 2
Laribacter_hongkongensis_HLHK9 0
Chromobacterium_violaceum_ATCC_12472 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 4
Methylibium_petroleiphilum_PM1 0
Rubrivivax_gelatinosus_IL144 0
Leptothrix_cholodnii_SP-6 5
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 0
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 2
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 1
Verminephrobacter_eiseniae_EF01-2 1
Delftia_sp._Cs1-4 2
Delftia_acidovorans_SPH-1 2
Polaromonas_sp._JS666 1
Variovorax_paradoxus_S110 0
Acidovorax_sp._JS42 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 1
Janthinobacterium_sp._Marseille 2
Herbaspirillum_seropedicae_SmR1 2
Pusillimonas_sp._T7-7 1
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 1
Nitrosospira_multiformis_ATCC_25196 1
Sideroxydans_lithotrophicus_ES-1 2
Methylotenera_versatilis_301 1
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Magnetococcus_marinus_MC-1 2
Parvularcula_bermudensis_HTCC2503 1
Brevundimonas_subvibrioides_ATCC_15264 0
Caulobacter_sp._K31 1
Caulobacter_segnis_ATCC_21756 0
Phenylobacterium_zucineum_HLK1 1
Novosphingobium_aromaticivorans_DSM_12444 2
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_wittichii_RW1 1
Maricaulis_maris_MCS10 2
Hirschia_baltica_ATCC_49814 2
Hyphomonas_neptunium_ATCC_15444 0
Dinoroseobacter_shibae_DFL_12 1
Phaeobacter_gallaeciensis_2.10 1
Pseudovibrio_sp._FO-BEG1 0
Jannaschia_sp._CCS1 2
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Paracoccus_denitrificans_PD1222 1
Rhodospirillum_photometricum_DSM_122 1
Tistrella_mobilis_KA081020-065 3
Magnetospirillum_magneticum_AMB-1 1
Rhodospirillum_centenum_SW 2
Rhodospirillum_rubrum_F11 2
Azospirillum_lipoferum_4B 2
Azospirillum_sp._B510 2
Azospirillum_brasilense_Sp245 1
Gluconacetobacter_xylinus_NBRC_3288 1
Acidiphilium_multivorum_AIU301 2
Acidiphilium_cryptum_JF-5 1
Polymorphum_gilvum_SL003B-26A1 1
Micavibrio_aeruginosavorus_ARL-13 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_chloromethanicum_CM4 2
Methylobacterium_extorquens_AM1 2
Methylobacterium_sp._4-46 0
Methylobacterium_populi_BJ001 2
Methylobacterium_nodulans_ORS_2060 2
Methylobacterium_radiotolerans_JCM_2831 2
Parvibaculum_lavamentivorans_DS-1 1
Sinorhizobium_meliloti_AK83 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 3
Rhizobium_leguminosarum_bv._viciae_3841 2
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 1
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 3
Mesorhizobium_sp._BNC1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Mesorhizobium_loti_MAFF303099 1
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Hyphomicrobium_sp._MC1 1
Oligotropha_carboxidovorans_OM4 2
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 2
Saccharophagus_degradans_2-40 3
Teredinibacter_turnerae_T7901 1
Aggregatibacter_aphrophilus_NJ8700 1
Aeromonas_veronii_B565 2
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aliivibrio_salmonicida_LFI1238 1
Vibrio_fischeri_MJ11 1
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_anguillarum_775 1
Vibrio_furnissii_NCTC_11218 2
Vibrio_vulnificus_MO6-24/O 1
Vibrio_cholerae_O395 1
Psychromonas_ingrahamii_37 1
Psychromonas_sp._CNPT3 1
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 0
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_denitrificans_OS217 1
Shewanella_oneidensis_MR-1 2
Shewanella_baltica_OS185 2
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 2
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 1
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 2
Pseudoalteromonas_atlantica_T6c 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 4
Marinobacter_sp._BSs20148 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2
Marinobacter_aquaeolei_VT8 3
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 1
Hahella_chejuensis_KCTC_2396 1
Marinomonas_mediterranea_MMB-1 0
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_spadix_BD-a59 1
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 2
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 2
Xanthomonas_campestris_pv._campestris_str._B100 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 2
Thioalkalivibrio_sp._K90mix 1
Halorhodospira_halophila_SL1 1
Thiocystis_violascens_DSM_198 2
Nitrosococcus_halophilus_Nc4 2
Coxiella_burnetii_Dugway_5J108-111 1
Serratia_proteamaculans_568 1
Dickeya_zeae_Ech1591 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Erwinia_sp._Ejp617 0
Erwinia_pyrifoliae_Ep1/96 0
Erwinia_amylovora_ATCC_49946 0
Cronobacter_turicensis_z3032 0
Cronobacter_sakazakii_ES15 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2
Enterobacter_aerogenes_KCTC_2190 1
Escherichia_fergusonii_ATCC_35469 0
Enterobacter_sp._R4-368 1
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._UW4 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_mendocina_ymp 4
Pseudomonas_aeruginosa_UCBPP-PA14 1
Psychrobacter_sp._PRwf-1 1
Acinetobacter_oleivorans_DR1 2
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_baumannii_ATCC_17978 1
Thermofilum_pendens_Hrk_5 1
Methanococcoides_burtonii_DSM_6242 0
Methanosarcina_acetivorans_C2A 0
Methanosarcina_barkeri_str._Fusaro 1
Methanoregula_boonei_6A8 1
Methanoculleus_bourgensis_MS2 1
Archaeoglobus_veneficus_SNP6 1
Thermococcus_sp._4557 0
Pyrococcus_yayanosii_CH1 1
Picrophilus_torridus_DSM_9790 1
Methanobrevibacter_ruminantium_M1 0
Aciduliprofundum_boonei_T469 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   36
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   13
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   9
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   4
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   7
Cryptococcus_neoformans_var._grubii_H99_ 8
Cryptococcus_neoformans_B-3501A_ 9
Cryptococcus_neoformans_JEC21_ 6
Paracoccidioides_brasiliensis_Pb01_ 7
Paracoccidioides_brasiliensis_Pb03_ 9
Coccidioides_posadasii_str._Silveira_ 12
Coccidioides_immitis_RMSCC_3703_ 5
Coccidioides_immitis_RMSCC_2394_ 8
Coccidioides_immitis_H538.4_ 6
Ajellomyces_dermatitidis_ER-3_ 8
Histoplasma_capsulatum_H143 5
Histoplasma_capsulatum_H88 7
Histoplasma_capsulatum_G186AR 8
Aspergillus_fumigatus_A1163_ 6
Candida_albicans_WO-1_ 6
Saccharomyces_cerevisiae_UC5 10
Saccharomyces_cerevisiae_PW5 10
Saccharomyces_cerevisiae_FL100 2
Saccharomyces_cerevisiae_CLIB324 4
Saccharomyces_cerevisiae_CBS7960 12
Saccharomyces_cerevisiae_YJM269 9
Saccharomyces_cerevisiae_T7 13
Saccharomyces_cerevisiae_FostersB 6
Saccharomyces_cerevisiae_FostersO 2
Saccharomyces_cerevisiae_VL3 6
Saccharomyces_cerevisiae_Vin13 4
Saccharomyces_cerevisiae_LalvinQA23 2
Saccharomyces_cerevisiae_AWRI796 4
Saccharomyces_cerevisiae_Sigma1278b 13
Saccharomyces_cerevisiae_W303 12
Saccharomyces_cerevisiae_JAY291 13
Saccharomyces_cerevisiae_AWRI1631 9
Saccharomyces_cerevisiae_YPS163 4
Saccharomyces_cerevisiae_M22 2
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 9
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 13
Saccharomyces_cerevisiae_YJM789 13
Saccharomyces_cerevisiae_RM11-1a 13
Saccharomyces_cerevisiae_RM11-1a_ 13
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   13
Schizosaccharomyces_pombe_972h-_ 4
Batrachochytrium_dendrobatidis_JEL423_ 11
Batrachochytrium_dendrobatidis_JAM81_ 8
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   66
Hordeum_vulgare_22   (Domesticated barley)   122
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   55
Trypanosoma_brucei_Lister_427_v4.1 9
Neospora_caninum_Nc-Liverpool_6.2 12
Plasmodium_falciparum_HB3_ 6
Plasmodium_falciparum_Dd2_ 7
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 0
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 1
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_sp._PCC_7002 1
Crinalium_epipsammum_PCC_9333 2
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 1
Cyanothece_sp._PCC_7822 6
Cyanothece_sp._PCC_7425 2
Cyanothece_sp._PCC_7424 3
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 2
Cyanobacterium_aponinum_PCC_10605 1
Cyanobacterium_stanieri_PCC_7202 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 3
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 3
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 3
Anabaena_cylindrica_PCC_7122 2
Frankia_sp._EuI1c 1
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 2
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_orientalis_HCCB10007 1
Actinoplanes_friuliensis_DSM_7358 1
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_sp._JDM601 0
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_yongonense_05-1390 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Mycobacterium_canettii_CIPT_140070017 0
Mycobacterium_canettii_CIPT_140060008 0
Mycobacterium_canettii_CIPT_140070008 0
Mycobacterium_canettii_CIPT_140070010 0
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_str._Beijing/NITR203 0
Mycobacterium_tuberculosis_UT205 0
Mycobacterium_tuberculosis_CTRI-2 0
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 0
Mycobacterium_tuberculosis_KZN_4207 0
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_str._Haarlem 0
Mycobacterium_tuberculosis_F11 0
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_tuberculosis_CDC1551 0
Mycobacterium_bovis_AF2122/97 0
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_smegmatis_str._MC2_155 1
Mycobacterium_kansasii_ATCC_12478 1
Gardnerella_vaginalis_HMP9231 1
Gardnerella_vaginalis_ATCC_14019 1
Bifidobacterium_longum_NCC2705 2
Bifidobacterium_longum_DJO10A 2
Bifidobacterium_longum_subsp._infantis_157F 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2
Bifidobacterium_longum_subsp._longum_KACC_91563 2
Bifidobacterium_longum_subsp._longum_BBMN68 2
Bifidobacterium_longum_subsp._longum_F8 2
Bifidobacterium_longum_subsp._longum_JCM_1217 2
Bifidobacterium_thermophilum_RBL67 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_B420 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_animalis_subsp._lactis_AD011 1
Bifidobacterium_breve_UCC2003 1
Bifidobacterium_asteroides_PRL2011 1
Bifidobacterium_bifidum_PRL2010 2
Bifidobacterium_bifidum_BGN4 1
Actinomyces_graevenitzii_C83_ 1
Deinococcus_peraridilitoris_DSM_19664 4
Thermus_oshimai_JL-2 2
Thermus_thermophilus_JL-18 3
Thermus_thermophilus_SG0.5JP17-16 3
Thermus_thermophilus_HB8 3
Eubacterium_siraeum_V10Sc8a 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 2
Desulfotomaculum_gibsoniae_DSM_7213 1
Roseburia_intestinalis_XB6B4 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_tetani_genome_12124569 1
Clostridium_botulinum_E3_str._Alaska_E43 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Thermacetogenium_phaeum_DSM_12270 1
Streptococcus_pneumoniae_670-6B 1
Streptococcus_suis_D9 1
Streptococcus_salivarius_JIM8777 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_polymyxa_E681 1
Bacillus_cereus_ATCC_10987 1
Salinibacter_ruber_DSM_13855 4
Rhodothermus_marinus_SG0.5JP17-172 3
Echinicola_vietnamensis_DSM_17526 49
Emticicia_oligotrophica_DSM_17448 15
Prevotella_sp._oral_taxon_299_str._F0039 15
Prevotella_dentalis_DSM_3688 30
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 29
Bacteroides_xylanisolvens_XB1A 62
Bacteroides_fragilis_638R 55
Bacteroides_fragilis_NCTC_9343 54
Nonlabens_dokdonensis_DSW-6 3
Psychroflexus_torquis_ATCC_700755 1
Riemerella_anatipestifer_RA-CH-2 1
Riemerella_anatipestifer_RA-CH-1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Chlamydia_pecorum_P787 1
Chlamydia_pecorum_W73 1
Chlamydia_pecorum_PV3056/3 1
Chlamydophila_pneumoniae_LPCoLN 1
Chlamydophila_pneumoniae_J138 1
Chlamydophila_pneumoniae_CWL029 1
Chlamydophila_pneumoniae_AR39 1
Singulisphaera_acidiphila_DSM_18658 5
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1
Leptospira_interrogans_serovar_Lai_str._56601 4
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Treponema_pedis_str._T_A4 2
Treponema_pallidum_str._Fribourg-Blanc 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 2
Treponema_pallidum_subsp._pallidum_str._Chicago 2
Treponema_pallidum_subsp._pallidum_DAL-1 2
Treponema_pallidum_subsp._pallidum_str._Nichols 2
Spirochaeta_thermophila_DSM_6578 1
Thermotoga_maritima_MSB8 0
Leptospirillum_ferriphilum_ML-04 1
Bdellovibrio_exovorus_JSS 0
Bdellovibrio_bacteriovorus_str._Tiberius 4
Arcobacter_butzleri_7h1h 1
Arcobacter_butzleri_ED-1 1
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 0
Lawsonia_intracellularis_N343 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4
Desulfovibrio_vulgaris_RCH1 2
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Desulfovibrio_vulgaris_str._Hildenborough 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 3
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sp._M18 3
Geobacter_sulfurreducens_PCA 1
Sorangium_cellulosum_So0157-2 4
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 8
Ralstonia_solanacearum_Po82 2
Ralstonia_solanacearum_CMR15 1
Burkholderia_sp._YI23 2
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._KJ006 2
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 2
Burkholderia_pseudomallei_K96243 2
Burkholderia_mallei_NCTC_10229 2
Burkholderia_mallei_NCTC_10247 2
Burkholderia_mallei_ATCC_23344 3
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 2
Burkholderia_cenocepacia_MC0-3 2
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 2
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 2
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Bordetella_pertussis_CS 2
Bordetella_parapertussis_18323 1
Bordetella_bronchiseptica_MO149 2
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 2
Zymomonas_mobilis_subsp._mobilis_CP4 1
Phaeobacter_gallaeciensis_DSM_17395 1
Phaeobacter_gallaeciensis_DSM_26640 1
Rhodobacter_sphaeroides_ATCC_17025 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Rhodospirillum_rubrum_ATCC_11170 2
Micavibrio_aeruginosavorus_EPB 1
Methylobacterium_extorquens_DM4 2
Methylobacterium_extorquens_PA1 2
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 2
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 1
Sinorhizobium_meliloti_BL225C 2
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 2
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_tropici_CIAT_899 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2
Candidatus_Liberibacter_solanacearum_CLso-ZC1 1
Mesorhizobium_australicum_WSM2073 0
Hyphomicrobium_nitrativorans_NL23 0
Hyphomicrobium_denitrificans_1NES1 1
Oligotropha_carboxidovorans_OM5 2
Oligotropha_carboxidovorans_OM5 2
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 2
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 3
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 1
Simiduia_agarivorans_SA1_=_DSM_21679 0
Haemophilus_influenzae_R2866 1
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_vulnificus_CMCP6 1
Vibrio_vulnificus_YJ016 1
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 2
Vibrio_cholerae_O395 1
Vibrio_cholerae_IEC224 2
Vibrio_cholerae_O1_str._2010EL-1786 2
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 2
Shewanella_sp._W3-18-1 2
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 2
Shewanella_baltica_OS678 3
Shewanella_baltica_OS117 2
Shewanella_baltica_OS223 2
Shewanella_baltica_OS195 2
Shewanella_baltica_OS155 2
Shewanella_sp._MR-7 2
Shewanella_putrefaciens_200 2
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 0
Thalassolituus_oleivorans_MIL-1 0
Stenotrophomonas_maltophilia_D457 2
Stenotrophomonas_maltophilia_JV3 2
Stenotrophomonas_maltophilia_R551-3 2
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 2
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 2
Xanthomonas_campestris_pv._raphani_756C 2
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Thioflavicoccus_mobilis_8321 1
Serratia_liquefaciens_ATCC_27592 1
Dickeya_dadantii_Ech586 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Erwinia_pyrifoliae_DSM_12163 0
Erwinia_amylovora_CFBP1430 0
Cronobacter_sakazakii_CMCC_45402 0
Cronobacter_sakazakii_SP291 0
Cronobacter_sakazakii_ATCC_BAA-894 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 2
Klebsiella_oxytoca_KCTC_1686 0
Klebsiella_pneumoniae_KCTC_2242 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Enterobacter_aerogenes_EA1509E 1
Escherichia_coli_E24377A 0
Escherichia_coli_LY180 0
Escherichia_coli_P12b 0
Escherichia_coli_UM146 1
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_SE15 1
Escherichia_coli_UTI89 1
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_poae_RE*1-1-14 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 2
Pseudomonas_resinovorans_NBRC_106553 2
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PAO1 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_junii__SH205 1
Methylophaga_sp._JAM7 1
Methanolobus_psychrophilus_R15 1
Thermococcus_sp._AM4 0
Ferroplasma_acidarmanus_fer1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   16
Pan_troglodytes_69_2.1.4   (Chimpanzee)   14
Gorilla_gorilla_69_3.1   (Western gorilla)   15
Pongo_abelii_69_2   (Sumatran orangutan)   9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   13
Macaca_mulatta_69_1   (Rhesus monkey)   14
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_69_3   (Small-eared galago)   14
Microcebus_murinus_69_1   (Gray mouse lemur)   17
Rattus_norvegicus_69_3.4   (Norway rat)   18
Mus_musculus_69_38   (House mouse)   17
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   16
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   13
Cavia_porcellus_69_3   (Domestic guinea pig)   14
Oryctolagus_cuniculus_69_2   (Rabbit)   13
Ochotona_princeps_69   (American pika)   17
Tupaia_belangeri_69   (Northern tree shrew)   15
Sus_scrofa_69_10.2   (Pig)   13
Bos_taurus_69_3.1   (Cattle)   16
Vicugna_pacos_69_1   (Alpaca)   12
Tursiops_truncatus_69_1   (Bottlenose dolphin)   13
Mustela_putorius_furo_69_1.0   (Domestic ferret)   12
Ailuropoda_melanoleuca_69_1   (Giant panda)   12
Canis_familiaris_69_3.1   (Dog)   21
Felis_catus_69   (Domestic cat)   9
Equus_caballus_69_2   (Horse)   13
Myotis_lucifugus_69_2.0   (Little brown bat)   16
Pteropus_vampyrus_69_1   (Large flying fox)   14
Sorex_araneus_69_1   (European shrew)   8
Erinaceus_europaeus_69   (Western European hedgehog)   15
Procavia_capensis_69_1   (Cape rock hyrax)   15
Loxodonta_africana_69_3   (African savanna elephant)   15
Echinops_telfairi_69   (Small Madagascar hedgehog)   12
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   15
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   18
Macropus_eugenii_69_1.0   (Tammar wallaby)   14
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   17
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   19
Ornithorhynchus_anatinus_69_5   (Platypus)   13
Petromyzon_marinus_69_7.0   (Sea lamprey)   6
Meleagris_gallopavo_69_2   (Turkey)   11
Gallus_gallus_69_2   (Chicken)   13
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   9
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   12
Anolis_carolinensis_69_2.0   (Green anole)   14
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   15
Latimeria_chalumnae_69_1   (Coelacanth)   15
Gadus_morhua_69_1   (Atlantic cod)   15
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   17
Takifugu_rubripes_69_4   (Torafugu)   18
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   19
Oryzias_latipes_69_1   (Japanese medaka)   13
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   14
Oreochromis_niloticus_69_1.0   (Nile tilapia)   18
Danio_rerio_69_9   (Zebrafish)   19
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   6
Ciona_intestinalis_69   (Vase tunicate)   5
Drosophila_melanogaster_69_5   (Fruit fly)   9
Caenorhabditis_elegans_69_215   (Roundworm)   6
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   13
Arabidopsis_thaliana_10   (Thale cress)   67

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   37
Homo_sapiens__(NCBI_version)   (Human)   23
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   17
Loa_loa_v3.3_(Request)   (Eye worm)   8
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   4
Encephalitozoon_cuniculi_(endoparasite) 1
Lotus_japonicus__(Early_assembly) 32
Malus_x_domestica_(Duplicate)   (Apple)   89
Ricinus_communis__(Early_assembly)   (Castor bean)   27
Nicotiana_benthamiana_0.4.4_(Early_draft) 104
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   65
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   67
Phoenix_dactylifera__(Early_draft)   (Date palm)   31
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 52
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 124
UniProt__viral_sequences_(Viral) 1
NCBI_viral_sequences_(Viral) 3
TargetDB__(Targets) 214
Protozoadb_2010_08_(Protozoadb) 240
STRING_v9.0.5_(STRING) 2536
Uniprot_2018_03_genome 304920
NCBI_2017_08_genome 86845
Core_Eukaryotic_Genes_458_(CEGMA) 1
Protein_Data_Bank_(all_PDB_sequenc) 25
PDB_chains_(SCOP_1.75)_(PDB) 5

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