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Domain combinations for _gap_,49299,49299,_gap_,49723,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49299 - PKD domain
49299 - PKD domain
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Felis_catus_76_6.2   (Domestic cat)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Crassostrea_gigas_22   (Pacific oyster)   0
Capitella_sp._I_ 0
Sarcoptes_scabiei 1
Mnemiopsis_leidyi   (Sea walnut)   0

Longest transcript per gene
Genome     Number
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Mus_musculus_69_38   (House mouse)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Felis_catus_69   (Domestic cat)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 576
NCBI_2017_08_genome 73

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