SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,49299,89260 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49299 - PKD domain
89260 - Collagen-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Deinococcus_gobiensis_I-0 1
Deinococcus_geothermalis_DSM_11300 1
Clostridium_perfringens_ATCC_13124 0
Clostridium_botulinum_A_str._ATCC_3502 0
Brevibacillus_brevis_NBRC_100599 0
Lysinibacillus_sphaericus_C3-41 0
Bacillus_weihenstephanensis_KBAB4 2
Bacillus_thuringiensis_str._Al_Hakam 2
Bacillus_cereus_03BB102 2
Bacillus_anthracis_str._A0248 3

Strains
Genome     Number
Clostridium_perfringens_SM101 0
Clostridium_perfringens_str._13 0
Clostridium_botulinum_H04402_065 0
Clostridium_botulinum_F_str._Langeland 0
Clostridium_botulinum_E3_str._Alaska_E43 0
Clostridium_botulinum_B1_str._Okra 0
Clostridium_botulinum_Ba4_str._657 0
Clostridium_botulinum_A2_str._Kyoto 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Clostridium_botulinum_A_str._Hall 0
Clostridium_botulinum_A_str._ATCC_19397 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_toyonensis_BCT-7112 2
Bacillus_thuringiensis_HD-771 2
Bacillus_thuringiensis_HD-789 2
Bacillus_thuringiensis_MC28 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 2
Bacillus_thuringiensis_YBT-1518 2
Bacillus_thuringiensis_Bt407 2
Bacillus_thuringiensis_serovar_konkukian_str._97-27 2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 3
Bacillus_thuringiensis_BMB171 3
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 3
Bacillus_cereus_FRI-35 2
Bacillus_cereus_biovar_anthracis_str._CI 2
Bacillus_cereus_AH820 2
Bacillus_cereus_AH187 2
Bacillus_cereus_B4264 2
Bacillus_cereus_G9842 2
Bacillus_cereus_Q1 2
Bacillus_cereus_F837/76 2
Bacillus_cereus_NC7401 2
Bacillus_cereus_E33L 3
Bacillus_cereus_ATCC_14579 4
Bacillus_cereus_ATCC_10987 2
Bacillus_anthracis_str._H9401 3
Bacillus_anthracis_str._CDC_684 3
Bacillus_anthracis_str._'Ames_Ancestor' 3
Bacillus_anthracis_str._Sterne 3
Bacillus_anthracis_str._Ames 3

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 2
TargetDB__(Targets) 4
STRING_v9.0.5_(STRING) 44
Uniprot_2018_03_genome 5808
NCBI_2017_08_genome 2186

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]