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Domain combinations for _gap_,49299,_gap_,49299,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49299 - PKD domain
49299 - PKD domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ovis_aries_76_3.1   (Sheep)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Saccoglossus_kowalevskii_v3.0 0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Oikopleura_dioica 1
Ciona_intestinalis_76   (Vase tunicate)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 1
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   0
Capitella_sp._I_ 0
Linepithema_humile_v1.1   (Argentine ant)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Schistosoma_mansoni_ 0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 2
Sphaeroforma_arctica_JP610_ 1
Cyanophora_paradoxa_ 0
Nostoc_sp._PCC_7524 0
Kribbella_flavida_DSM_17836 0
Clostridium_cellulolyticum_H10 1
Clostridium_thermocellum_ATCC_27405 0
Acetobacterium_woodii_DSM_1030 0
Heliobacterium_modesticaldum_Ice1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 1
Salinibacter_ruber_M8 0
Flexibacter_litoralis_DSM_6794 0
Cyclobacterium_marinum_DSM_745 0
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 1
Dyadobacter_fermentans_DSM_18053 1
Cytophaga_hutchinsonii_ATCC_33406 1
Runella_slithyformis_DSM_19594 1
Paludibacter_propionicigenes_WB4 0
Solitalea_canadensis_DSM_3403 1
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 0
Gramella_forsetii_KT0803 0
Flavobacterium_psychrophilum_JIP02/86 1
Desulfurispirillum_indicum_S5 1
Candidatus_Solibacter_usitatus_Ellin6076 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 0
Stigmatella_aurantiaca_DW4/3-1 0
Myxococcus_xanthus_DK_1622 1
Burkholderia_xenovorans_LB400 0
Teredinibacter_turnerae_T7901 1
Alteromonas_macleodii_str._'Deep_ecotype' 0
Candidatus_Korarchaeum_cryptofilum_OPF8 1
Methanocella_conradii_HZ254 0
Methanosarcina_acetivorans_C2A 0
Methanohalophilus_mahii_DSM_5219 1
Methanospirillum_hungatei_JF-1 1
Methanoculleus_bourgensis_MS2 0
Thermococcus_gammatolerans_EJ3 0
Pyrococcus_sp._ST04 0
Pyrococcus_horikoshii_OT3 0
Methanotorris_igneus_Kol_5 1
methanocaldococcus_infernus_ME 0
Methanocaldococcus_jannaschii_DSM_2661 0
Methanothermococcus_okinawensis_IH1 1

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Strains
Genome     Number
Clostridium_thermocellum_DSM_1313 0
Thermacetogenium_phaeum_DSM_12270 1
Listeria_monocytogenes_EGD_sequence 1
Listeria_monocytogenes_serotype_4b_str._LL195 1
Listeria_monocytogenes_07PF0776 1
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC5850 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_L312 1
Listeria_monocytogenes_SLCC2479 1
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_SLCC2378 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1
Listeria_monocytogenes_08-5578 1
Listeria_monocytogenes_08-5923 1
Listeria_monocytogenes_10403S 1
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_Finland_1998 1
Listeria_monocytogenes_FSL_R2-561 1
Listeria_monocytogenes_serotype_4b_str._F2365 1
Listeria_monocytogenes_EGD-e 1
Emticicia_oligotrophica_DSM_17448 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_AltDE1 0
Methanomethylovorans_hollandica_DSM_15978 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0
Archaeoglobus_sulfaticallidus_PM70-1 0

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Longest transcript per gene
Genome     Number
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 14
Uniprot_2018_03_genome 4275
NCBI_2017_08_genome 1573

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