SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,50199 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50199 - Staphylococcal nuclease

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Mus_musculus_76_38   (House mouse)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 0
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Octopus_bimaculoides_280 1
Lottia_gigantea_   (Owl limpet)   1
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Rhodnius_prolixus_22 1
Strigamia_maritima_22 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Acropora_digitifera_v1.0 1
Amphimedon_queenslandica 1
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 1
Rhizopus_oryzae_RA_99-880_ 1
Mucor_circinelloides_ 1
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2
Melampsora_laricis-populina_ 1
Microbotryum_violaceum_22 1
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 1
Coniophora_puteana 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 1
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 1
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   1
Daldinia_eschscholzii_EC12_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 1
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 1
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 1
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 1
Candida_albicans_SC5314 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 1
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 1
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 1
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 1
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_purpureum_ 0
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 0
Pinus_taeda   (Loblolly pine)   2
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 3
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 2
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Capsella_rubella_v183 2
Arabidopsis_lyrata_   (Lyrate rockcress)   2
Arabidopsis_thaliana_10   (Thale cress)   2
Medicago_truncatula_   (Barrel medic)   2
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   3
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   1
Manihot_esculenta_v147   (Cassava)   2
Populus_trichocarpa_v156   (Black cottonwood)   2
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 4
Aquilegia_coerulea_v195 2
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   6
Aegilops_tauschii_22 2
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   8
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 4
Oryza_glaberrima   (African rice)   2
Oryza_punctata_22 8
Oryza_nivara_22 8
Oryza_brachyantha_22   (Malo sina)   5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   4
Oryza_sativa_v193   (Rice)   4
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   4
Zea_mays_subsp._mays_   (Maize)   2
Zea_mays_v181   (Maize)   2
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   2
Musa_acuminata_22   (Wild Malaysian banana)   2
Physcomitrella_patens 1
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 2
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 0
Trypanosoma_vivax_ 1
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 1
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_capsici_ 1
Phaeodactylum_tricornutumCCAP_1055/1 0
Fragilariopsis_cylindrus 2
Thalassiosira_pseudonana_CCMP1335 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 1
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 1
Trichomonas_vaginalis_ 0
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 4
Thermobaculum_terrenum_ATCC_BAA-798 1
Synechocystis_sp._PCC_6803 1
Microcoleus_sp._PCC_7113 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 1
Mycoplasma_crocodyli_MP145 0
Mycoplasma_conjunctivae_HRC/581 1
Mycoplasma_bovis_HB0801 0
Mycoplasma_fermentans_M64 0
Mycoplasma_arthritidis_158L3-1 1
Mycoplasma_agalactiae_PG2 0
Mycoplasma_synoviae_53 2
Mycoplasma_pulmonis_UAB_CTIP 1
Mycoplasma_pneumoniae_309 0
Mycoplasma_hyorhinis_GDL-1 0
Mycoplasma_hyopneumoniae_168 0
Mycoplasma_hominis_ATCC_23114 1
Mycoplasma_gallisepticum_str._F 0
Eggerthella_sp._YY7918 1
Rubrobacter_xylanophilus_DSM_9941 2
Geodermatophilus_obscurus_DSM_43160 0
Actinosynnema_mirum_DSM_43827 1
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 0
Gordonia_sp._KTR9 1
Gordonia_bronchialis_DSM_43247 1
Mycobacterium_chubuense_NBB4 1
Kytococcus_sedentarius_DSM_20547 0
Intrasporangium_calvum_DSM_43043 0
Xylanimonas_cellulosilytica_DSM_15894 1
Arthrobacter_sp._Rue61a 1
Anaerolinea_thermophila_UNI-1 0
Thermomicrobium_roseum_DSM_5159 0
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 0
Truepera_radiovictrix_DSM_17093 1
Finegoldia_magna_ATCC_29328 0
Symbiobacterium_thermophilum_IAM_14863 0
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Thermaerobacter_marianensis_DSM_12885 0
Candidatus_Desulforudis_audaxviator_MP104C 0
Thermincola_potens_JR 1
Desulfotomaculum_kuznetsovii_DSM_6115 0
Desulfotomaculum_ruminis_DSM_2154 0
Clostridium_sticklandii_DSM_519 0
Butyrivibrio_proteoclasticus_B316 1
Clostridium_sp._BNL1100 1
Coprothermobacter_proteolyticus_DSM_5265 0
Carboxydothermus_hydrogenoformans_Z-2901 0
Ammonifex_degensii_KC4 0
Kyrpidia_tusciae_DSM_2912 0
Brevibacillus_brevis_NBRC_100599 0
Geobacillus_thermoglucosidasius_C56-YS93 0
Lysinibacillus_sphaericus_C3-41 1
Oceanobacillus_iheyensis_HTE831 0
Anoxybacillus_flavithermus_WK1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 0
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 0
Geobacillus_sp._WCH70 0
Geobacillus_thermodenitrificans_NG80-2 0
Bacillus_sp._1NLA3E 0
Bacillus_atrophaeus_1942 0
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_weihenstephanensis_KBAB4 0
Bacillus_cereus_03BB102 1
Bacillus_anthracis_str._A0248 1
Bacillus_pseudofirmus_OF4 1
Bacillus_cellulosilyticus_DSM_2522 0
Bacillus_pumilus_SAFR-032 0
Bacillus_megaterium_DSM_319 0
Staphylococcus_pseudintermedius_HKU10-03 1
Staphylococcus_haemolyticus_JCSC1435 0
Staphylococcus_carnosus_subsp._carnosus_TM300 0
Staphylococcus_aureus_subsp._aureus_JH1 2
Staphylococcus_aureus 2
Candidatus_Cloacamonas_acidaminovorans 1
Salinibacter_ruber_M8 0
Flexibacter_litoralis_DSM_6794 1
Flavobacteriaceae_bacterium_3519-10 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Brachyspira_murdochii_DSM_12563 1
Brachyspira_intermedia_PWS/A 1
Brachyspira_hyodysenteriae_WA1 1
Spirochaeta_caldaria_DSM_7334 1
Fervidobacterium_pennivorans_DSM_9078 0
Persephonella_marina_EX-H1 1
Candidatus_Nitrospira_defluvii 1
Leptotrichia_buccalis_C-1013-b 1
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 1
Campylobacter_jejuni_subsp._doylei_269.97 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 0
Neisseria_meningitidis_alpha14 1
Neisseria_meningitidis_FAM18 1
Neisseria_lactamica_020-06 1
Neisseria_gonorrhoeae_NCCP11945 1
Burkholderia_xenovorans_LB400 0
Acidovorax_sp._JS42 0
Pusillimonas_sp._T7-7 1
Bordetella_petrii_DSM_12804 1
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_eutropha_C91 0
Nitrosomonas_europaea_ATCC_19718 0
Methylobacillus_flagellatus_KT 1
Phenylobacterium_zucineum_HLK1 1
Erythrobacter_litoralis_HTCC2594 3
Sphingobium_japonicum_UT26S 1
Sphingomonas_wittichii_RW1 1
Pseudovibrio_sp._FO-BEG1 1
Ruegeria_pomeroyi_DSS-3 1
Roseobacter_litoralis_Och_149 1
Roseobacter_denitrificans_OCh_114 1
Magnetospirillum_magneticum_AMB-1 2
Azospirillum_sp._B510 0
Granulibacter_bethesdensis_CGDNIH1 1
Polymorphum_gilvum_SL003B-26A1 3
Xanthobacter_autotrophicus_Py2 1
Methylobacterium_chloromethanicum_CM4 2
Methylobacterium_extorquens_AM1 3
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 2
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 1
Ochrobactrum_anthropi_ATCC_49188 2
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 1
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Brucella_melitensis_ATCC_23457 1
Brucella_ovis_ATCC_25840 1
Brucella_abortus_S19 2
Sinorhizobium_fredii_NGR234 4
Sinorhizobium_medicae_WSM419 2
Sinorhizobium_meliloti_AK83 4
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3
Rhizobium_etli_CIAT_652 2
Rhizobium_leguminosarum_bv._viciae_3841 3
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 2
Agrobacterium_sp._H13-3 3
Agrobacterium_vitis_S4 2
Mesorhizobium_opportunistum_WSM2075 3
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 3
Mesorhizobium_loti_MAFF303099 2
Methylocella_silvestris_BL2 0
Hyphomicrobium_sp._MC1 0
Hyphomicrobium_denitrificans_ATCC_51888 0
Oligotropha_carboxidovorans_OM4 2
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_winogradskyi_Nb-255 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 1
Bartonella_tribocorum_CIP_105476 1
Bartonella_clarridgeiae_73 2
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 2
Bartonella_quintana_str._Toulouse 1
Cellvibrio_japonicus_Ueda107 0
Shewanella_sediminis_HAW-EB3 0
Marinobacter_aquaeolei_VT8 1
Thioalkalivibrio_sp._K90mix 1
Nitrosococcus_oceani_ATCC_19707 0
gamma_proteobacterium_HdN1 0
Pseudomonas_stutzeri_A1501 0
Candidatus_Caldiarchaeum_subterraneum 1
Cenarchaeum_symbiosum_A 1
Candidatus_Nitrosopumilus_sp._AR2 2
Nitrosopumilus_maritimus_SCM1 1
halophilic_archaeon_DL31 0
Methanosaeta_thermophila_PT 1
Ferroglobus_placidus_DSM_10642 0
Archaeoglobus_profundus_DSM_5631 0
Thermococcus_sp._4557 0
Thermococcus_gammatolerans_EJ3 1
Halopiger_xanaduensis_SH-6 0
Natrinema_sp._J7-2 0
Haloquadratum_walsbyi_DSM_16790 0
Halogeometricum_borinquense_DSM_11551 0
Haloferax_mediterranei_ATCC_33500 0
Haloferax_volcanii_DS2 0
Halorhabdus_utahensis_DSM_12940 1
Natronomonas_pharaonis_DSM_2160 1
Haloarcula_hispanica_ATCC_33960 0
Haloarcula_marismortui_ATCC_43049 0
Halalkalicoccus_jeotgali_B3 0
Halobacterium_salinarum_R1 0
Halobacterium_sp._NRC-1 0
Methanotorris_igneus_Kol_5 1
Methanocaldococcus_sp._FS406-22 1
Methanocaldococcus_vulcanius_M7 1
Methanocaldococcus_jannaschii_DSM_2661 1
Methanococcus_aeolicus_Nankai-3 1
Methanococcus_voltae_A3 1
Methanothermobacter_thermautotrophicus_str._Delta_H 1
Methanobrevibacter_sp._AbM4 1
Acholeplasma_laidlawii_PG-8A 1

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Strains
Genome     Number
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 1
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 1
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Schizosaccharomyces_pombe_972h-_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2
Trypanosoma_brucei_Lister_427_v4.1 0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Synechocystis_sp._PCC_6803 1
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Prochlorococcus_marinus_str._MIT_9211 1
Oscillatoria_acuminata_PCC_6304 1
Cyanothece_sp._ATCC_51142 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Mycoplasma_cynos_C142 0
Mycoplasma_bovis_Hubei-1 0
Mycoplasma_bovis_PG45 0
Mycoplasma_fermentans_JER 0
Mycoplasma_fermentans_PG18 0
Mycoplasma_agalactiae 0
Mycoplasma_pneumoniae_M129-B7 0
Mycoplasma_pneumoniae_FH 0
Mycoplasma_pneumoniae_M129 0
Mycoplasma_hyorhinis_SK76 0
Mycoplasma_hyorhinis_MCLD 0
Mycoplasma_hyorhinis_HUB-1 0
Mycoplasma_hyorhinis_DBS_1050 0
Mycoplasma_hyopneumoniae_168-L 0
Mycoplasma_hyopneumoniae_7422 0
Mycoplasma_hyopneumoniae_232 0
Mycoplasma_hyopneumoniae_7448 0
Mycoplasma_hyopneumoniae_J 0
Mycoplasma_gallisepticum_NC08_2008.031-4-3P 0
Mycoplasma_gallisepticum_CA06_2006.052-5-2P 0
Mycoplasma_gallisepticum_NC06_2006.080-5-2P 0
Mycoplasma_gallisepticum_WI01_2001.043-13-2P 0
Mycoplasma_gallisepticum_NY01_2001.047-5-1P 0
Mycoplasma_gallisepticum_NC96_1596-4-2P 0
Mycoplasma_gallisepticum_NC95_13295-2-2P 0
Mycoplasma_gallisepticum_VA94_7994-1-7P 0
Mycoplasma_gallisepticum_S6 0
Mycoplasma_gallisepticum_str._R(high) 0
Mycoplasma_gallisepticum_str._R(low) 0
Gordonibacter_pamelaeae_7-10-1-b 1
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Thermus_thermophilus_SG0.5JP17-16 0
Clostridium_botulinum_B1_str._Okra 1
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_K02 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 0
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y4.1MC1 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 0
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 0
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 0
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 0
Bacillus_amyloliquefaciens_Y2 0
Bacillus_amyloliquefaciens_XH7 0
Bacillus_amyloliquefaciens_LL3 0
Bacillus_amyloliquefaciens_TA208 0
Bacillus_amyloliquefaciens_DSM_7 0
Bacillus_licheniformis_9945A 0
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1
Bacillus_subtilis_subsp._spizizenii_str._W23 0
Bacillus_subtilis_subsp._natto_BEST195 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_thuringiensis_HD-771 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 1
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_AH820 1
Bacillus_cereus_AH187 1
Bacillus_cereus_G9842 2
Bacillus_cereus_Q1 1
Bacillus_cereus_NC7401 1
Bacillus_cereus_ATCC_10987 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._A2012 1
Bacillus_megaterium_WSH-002 0
Bacillus_megaterium_QM_B1551 0
Staphylococcus_aureus_subsp._aureus_MSHR1132 1
Staphylococcus_pseudintermedius_ED99 1
Staphylococcus_aureus_CA-347 1
Staphylococcus_aureus_Bmb9393 2
Staphylococcus_aureus_M1 1
Staphylococcus_aureus_08BA02176 2
Staphylococcus_aureus_ST228/18412 2
Staphylococcus_aureus_ST228/18341 2
Staphylococcus_aureus_ST228/16125 2
Staphylococcus_aureus_ST228/16035 2
Staphylococcus_aureus_ST228/15532 2
Staphylococcus_aureus_ST228/10497 2
Staphylococcus_aureus_ST228/10388 2
Staphylococcus_aureus_04-02981 1
Staphylococcus_aureus_RF122 1
Staphylococcus_aureus_subsp._aureus_Z172 1
Staphylococcus_aureus_subsp._aureus_6850 2
Staphylococcus_aureus_subsp._aureus_SA957 1
Staphylococcus_aureus_subsp._aureus_CN1 2
Staphylococcus_aureus_subsp._aureus_SA40 1
Staphylococcus_aureus_subsp._aureus_11819-97 1
Staphylococcus_aureus_subsp._aureus_M013 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1
Staphylococcus_aureus_subsp._aureus_VC40 1
Staphylococcus_aureus_subsp._aureus_T0131 1
Staphylococcus_aureus_subsp._aureus_LGA251 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1
Staphylococcus_aureus_subsp._aureus_ED133 1
Staphylococcus_aureus_subsp._aureus_ED98 1
Staphylococcus_aureus_subsp._aureus_TW20 1
Staphylococcus_aureus_subsp._aureus_55/2053 1
Staphylococcus_aureus_subsp._aureus_TCH60 2
Staphylococcus_aureus_subsp._aureus_str._JKD6008 2
Staphylococcus_aureus_subsp._aureus_71193 2
Staphylococcus_aureus_subsp._aureus_S0385 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1
Staphylococcus_aureus_subsp._aureus_Mu3 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1
Staphylococcus_aureus_subsp._aureus_JH9 2
Staphylococcus_aureus_subsp._aureus_MSSA476 1
Staphylococcus_aureus_subsp._aureus_MRSA252 1
Staphylococcus_aureus_subsp._aureus_MW2 1
Staphylococcus_aureus_subsp._aureus_N315 1
Staphylococcus_aureus_subsp._aureus_Mu50 1
Staphylococcus_aureus_subsp._aureus_COL 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Brachyspira_pilosicoli_WesB 1
Brachyspira_pilosicoli_B2904 1
Desulfobacula_toluolica_Tol2 1
Desulfovibrio_vulgaris_RCH1 1
Desulfovibrio_vulgaris_str._Hildenborough 2
Neisseria_meningitidis_WUE_2594 1
Neisseria_meningitidis_G2136 1
Neisseria_meningitidis_M04-240196 1
Neisseria_meningitidis_M01-240149 1
Neisseria_meningitidis_NZ-05/33 1
Neisseria_meningitidis_M01-240355 1
Neisseria_meningitidis_8013 1
Neisseria_meningitidis_Z2491 1
Neisseria_meningitidis_H44/76 1
Neisseria_meningitidis_alpha710 1
Neisseria_meningitidis_MC58 1
Neisseria_gonorrhoeae_TCDC-NG08107 1
Neisseria_gonorrhoeae_FA_1090 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_parapertussis_Bpp5 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Nitrosomonas_sp._AL212 0
Paracoccus_aminophilus_JCM_7686 1
Methylobacterium_extorquens_DM4 2
Methylobacterium_extorquens_PA1 2
Brucella_ceti_TE10759-12 1
Brucella_ceti_TE28753-12 1
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_melitensis_NI 1
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Brucella_melitensis_bv._1_str._16M 1
Brucella_abortus_A13334 1
Brucella_melitensis_biovar_Abortus_2308 1
Brucella_abortus_bv._1_str._9-941 1
Sinorhizobium_fredii_USDA_257 2
Sinorhizobium_fredii_HH103 2
Sinorhizobium_meliloti_2011 3
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 3
Sinorhizobium_meliloti_SM11 2
Sinorhizobium_meliloti_BL225C 3
Sinorhizobium_meliloti_1021 2
Rhizobium_etli_CFN_42 2
Rhizobium_etli_bv._mimosae_str._Mim1 5
Rhizobium_tropici_CIAT_899 4
Rhizobium_leguminosarum_bv._trifolii_WSM2304 4
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2
Mesorhizobium_australicum_WSM2073 4
Hyphomicrobium_nitrativorans_NL23 0
Hyphomicrobium_denitrificans_1NES1 0
Oligotropha_carboxidovorans_OM5 2
Oligotropha_carboxidovorans_OM5 2
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_japonicum_USDA_6 1
Bartonella_australis_Aust/NH1 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 2
Bartonella_quintana_RM-11 1
Escherichia_coli_UMNK88 1
Pseudomonas_stutzeri_DSM_10701 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Thermococcus_sp._AM4 1
Haloquadratum_walsbyi_C23 0
Halorhabdus_tiamatea_SARL4B 1
Haloarcula_hispanica_N601 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Felis_catus_69   (Domestic cat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Meleagris_gallopavo_69_2   (Turkey)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   2

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Phoenix_dactylifera__(Early_draft)   (Date palm)   2
Acholeplasma_laidlawii_PG-8A_(duplicate) 1
NCBI_plasmid_sequences_(Plasmids) 65
STRING_v9.0.5_(STRING) 229
Uniprot_2018_03_genome 11067
NCBI_2017_08_genome 15154
UniProt__viral_sequences_(Viral) 0
TargetDB__(Targets) 2
NCBI_viral_sequences_(Viral) 0
Protozoadb_2010_08_(Protozoadb) 0

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