SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,50630 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50630 - Acid proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   4
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   3
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   2
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   3
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   2
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 5
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   3
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   3
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   3
Helobdella_robusta_ 5
Capitella_sp._I_ 6
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Bombyx_mori_   (Domestic silkworm)   3
Nasonia_vitripennis_   (Jewel wasp)   1
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 8
Drosophila_pseudoobscura_2.13 4
Drosophila_persimilis_1.3 3
Drosophila_suzukii 2
Drosophila_yakuba_1.3 5
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 7
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 3
Drosophila_ananassae_1.3 2
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Megaselia_scalaris_22 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   3
Acyrthosiphon_pisum_   (Pea aphid)   1
Daphnia_pulex_   (Common water flea)   7
Strigamia_maritima_22 2
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 6
Meloidogyne_incognita_   (Southern root-knot nematode)   13
Meloidogyne_hapla_ 4
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 17
Caenorhabditis_brenneri_ 6
Caenorhabditis_remanei_ 11
Caenorhabditis_elegans_76_235   (Roundworm)   4
Caenorhabditis_briggsae_2 4
Trichinella_spiralis_22 5
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 1
Taenia_solium_   (Pork tapeworm)   5
Schistosoma_mansoni_ 0
Mnemiopsis_leidyi   (Sea walnut)   0
Thelohanellus_kitauei 8
Acropora_digitifera_v1.0 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   6
Hydra_vulgaris 0
Amphimedon_queenslandica 2
Trichoplax_adhaerens_ 1
Proterospongia_sp._ATCC_50818_ 0
Sphaeroforma_arctica_JP610_ 3
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 4
Phycomyces_blakesleeanus_ 14
Rhizopus_oryzae_RA_99-880_ 26
Mucor_circinelloides_ 3
Rhizomucor_miehei_CAU432_ 9
Malassezia_globosa_CBS_7966_ 22
Sporisorium_reilianum_22 5
Ustilago_maydis_ 4
Mixia_osmundae_IAM_14324_v1.0 11
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 10
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 82
Melampsora_laricis-populina_ 15
Rhodotorula_graminis_WP1_v1.0 6
Sporobolomyces_roseus_IAM_13481_ 2
Microbotryum_violaceum_22 8
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 41
Piloderma_croceum_F_1598_v1.0 19
Serpula_lacrymans_var._lacrymans_S7.9_ 5
Coniophora_puteana 21
Hydnomerulius_pinastri_v2.0 15
Paxillus_rubicundulus_Ve08.2h10_v1.0 9
Pisolithus_microcarpus_441_v1.0 8
Pisolithus_tinctorius_Marx_270_v1.0 19
Scleroderma_citrinum_Foug_A_v1.0 13
Coprinopsis_cinerea_okayama7_130_v3 2
Pleurotus_ostreatus_   (Oyster mushroom)   24
Amanita_thiersii_Skay4041_v1.0 6
Amanita_muscaria_Koide_v1.0   (Fly agaric)   23
Galerina_marginata_v1.0 15
Hebeloma_cylindrosporum_h7_v2.0 5
Laccaria_bicolor_S238N-H82_ 19
Agaricus_bisporus_var._bisporus_ 9
Schizophyllum_commune_ 9
Stereum_hirsutum_FP-91666_SS1__v1.0 20
Heterobasidion_annosum_ 9
Gloeophyllum_trabeumv1.0 18
Punctularia_strigosozonata_v1.0 21
Sebacina_vermifera_MAFF_305830_v1.0 5
Fomitiporia_mediterranea_v1.0 23
Tulasnella_calospora_AL13/4D_v1.0 16
Postia_placenta_ 48
Wolfiporia_cocos_MD-104_SS10__v1.0 20
Fomitopsis_pinicolav1.0 30
Fomitopsis_pinicola_FP-58527_SS1_v3.0 25
Phanerochaete_chrysosporium_RP-78_2.1 11
Dichomitus_squalens 29
Trametes_versicolor_v1.0 24
Tremella_mesenterica_   (Witches' butter)   4
Daldinia_eschscholzii_EC12_v1.0 10
Apiospora_montagnei_NRRL_25634_v1.0 10
Magnaporthe_poae_ATCC_64411_22 12
Magnaporthe_grisea_70-15_ 11
Podospora_anserina_ 7
Sporotrichum_thermophile_ATCC_42464_ 7
Thielavia_terrestris_NRRL_8126_ 11
Chaetomium_globosum_CBS_148.51_ 7
Neurospora_tetrasperma_ 6
Neurospora_discreta_FGSC_8579_ 5
Neurospora_crassa_OR74A_ 6
Cryphonectria_parasitica_   (Chestnut blight fungus)   12
Verticillium_albo-atrum_VaMs.102_ 6
Verticillium_dahliae_VdLs.17_ 7
Acremonium_alcalophilumv_1.0 3
Glomerella_graminicola_22 7
Fusarium_graminearum_ 7
Nectria_haematococca_mpVI_ 6
Fusarium_oxysporum_f._sp._lycopersici_4286_ 6
Fusarium_verticillioides_7600_ 9
Trichoderma_asperellum_CBS_433.97_v1.0 8
Trichoderma_atroviride_ 7
Trichoderma_citrinoviride_v1.0 6
Trichoderma_reesei_1.2 7
Trichoderma_virens_Gv29-8_ 9
Trichoderma_longibrachiatum_ATCC_18648_v1.0 7
Trichoderma_harzianum_CBS_226.95_v1.0 9
Amorphotheca_resinae_v1.0   (Creosote fungus)   3
Botrytis_cinerea_B05.10_ 10
Sclerotinia_sclerotiorum_ 5
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 4
Leptosphaeria_maculans_22 3
Setosphaeria_turcica_v1.0 5
Cochliobolus_miyabeanus_ATCC_44560_v1.0 6
Cochliobolus_victoriae_FI3_v1.0 6
Cochliobolus_carbonum_26-R-13_v1.0 8
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 5
Pyrenophora_teres_f._teres_22 5
Pyrenophora_tritici-repentis_ 6
Stagonospora_nodorum_ 4
Mycosphaerella_graminicola_IPO323_ 8
Zasmidium_cellare_ATCC_36951_v1.0 7
Dothistroma_septosporum 5
Septoria_musiva_v1.0 4
Mycosphaerella_fijiensis_CIRAD86_ 5
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 7
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 2
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 3
Trichophyton_verrucosum_HKI_0517_ 4
Arthroderma_benhamiae_CBS_112371_ 3
Trichophyton_tonsurans_CBS_112818_ 4
Trichophyton_rubrum_CBS_118892_ 4
Uncinocarpus_reesii_1704_ 3
Aspergillus_zonatus_v1.0 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 3
Aspergillus_acidus_v1.0 4
Aspergillus_fumigatus_Af293 4
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 5
Aspergillus_versicolor_v1.0 4
Aspergillus_glaucus 2
Aspergillus_carbonarius_ITEM_5010_ 5
Neosartorya_fischeri_NRRL_181_ 5
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 4
Aspergillus_oryzae_RIB40_ 6
Aspergillus_niger_22 3
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 6
Aspergillus_clavatus_NRRL_1_ 4
Penicillium_marneffei_ATCC_18224_ 27
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3
Candida_dubliniensis_CD36_ 6
Candida_tropicalis_MYA-3404_ 7
Candida_parapsilosis_ 5
Candida_albicans_SC5314 8
Lodderomyces_elongisporus_NRRL_YB-4239_ 4
Babjeviella_inositovora_NRRL_Y-12698_v1.0 4
Pichia_stipitis_CBS_6054_ 2
Candida_guilliermondii_ATCC_6260_ 6
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2
Debaromyces_hansenii 2
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 7
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 3
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 6
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 0
Schizosaccharomyces_octosporus_yFS286_ 0
Schizosaccharomyces_japonicus_yFS275_ 3
Schizosaccharomyces_pombe   (Fission yeast)   0
Catenaria_anguillulae_PL171_v1.0 7
Allomyces_macrogynus_ATCC_38327_ 3
Spizellomyces_punctatus_DAOM_BR117_ 2
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 5
Selaginella_moellendorffii_ 28
Pinus_taeda   (Loblolly pine)   58
Picea_abies   (Norway spruce)   58
Eucalyptus_grandis_v201   (Rose gum)   76
Theobroma_cacao_B97-61/B2_v1   (Cacao)   92
Gossypium_raimondii_v221 96
Citrus_clementina_v165 68
Citrus_sinensis_v154   (Sweet orange)   79
Thellungiella_halophila_v173 56
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   66
Capsella_rubella_v183 54
Arabidopsis_lyrata_   (Lyrate rockcress)   54
Arabidopsis_thaliana_10   (Thale cress)   54
Carica_papaya_   (Papaya)   30
Medicago_truncatula_   (Barrel medic)   82
Phaseolus_vulgaris_v186   (French bean)   68
Glycine_max_v109   (Soybean)   110
Cucumis_sativus_v122   (Cucumber)   50
Fragaria_vesca_   (Wild strawberry)   44
Malus_domestica_v196   (Apple)   37
Prunus_persica_v139   (Peach)   52
Linum_usitatissimum_v200   (Flax)   85
Manihot_esculenta_v147   (Cassava)   56
Populus_trichocarpa_v156   (Black cottonwood)   76
Vitis_vinifera_   (Wine grape)   20
Mimulus_guttatus_v140   (Spotted monkey flower)   91
Solanum_lycopersicum_v.2.3   (Tomato)   69
Solanum_tuberosum_   (Potato)   92
Actinidia_chinensis_Hongyang_ 44
Aquilegia_coerulea_v195 63
Triticum_urartu_22 46
Triticum_aestivum_22   (Bread wheat)   69
Aegilops_tauschii_22 71
Brachypodium_distachyon_   (Stiff brome)   59
Oryza_barthii_22   (African wild rice)   47
Oryza_meridionalis_22 65
Oryza_glumaepatula_22 69
Oryza_glaberrima   (African rice)   75
Oryza_punctata_22 74
Oryza_nivara_22 83
Oryza_brachyantha_22   (Malo sina)   44
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   166
Oryza_sativa_v193   (Rice)   167
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   50
Panicum_virgatum_v202   (Switchgrass)   147
Setaria_italica_v164   (Foxtail millet)   99
Zea_mays_subsp._mays_   (Maize)   90
Zea_mays_v181   (Maize)   99
Sorghum_bicolor_   (Sorghum)   88
Musa_balbisiana   (Balbis banana)   63
Musa_acuminata_22   (Wild Malaysian banana)   40
Amborella_trichopoda_22 44
Physcomitrella_patens 18
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 8
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 1
Micromonas_sp._RCC299_ 2
Micromonas_pusilla_CCMP1545_v3.0 2
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 1
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 7
Cyanophora_paradoxa_ 3
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Ectocarpus_siliculosus 2
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 4
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 6
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 6
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 10
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 2
Fragilariopsis_cylindrus 4
Thalassiosira_pseudonana_CCMP1335 6
Perkinsus_marinus_ATCC_50983_ 13
Paramecium_tetraurelia_ 15
Tetrahymena_thermophila_SB210_1_ 5
Ichthyophthirius_multifiliis_strain_G5_ 1
Cryptosporidium_hominis 1
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 2
Neospora_caninum 2
Toxoplasma_gondii_VEG 2
Toxoplasma_gondii_ME49 2
Toxoplasma_gondii_GT1 2
Babesia_bovis_T2Bo_ 6
Theileria_parva__ 4
Theileria_annulata 4
Plasmodium_falciparum_3D7_ 7
Plasmodium_vivax_SaI-1_7.0 4
Plasmodium_knowlesi_strain_H_ 4
Plasmodium_yoelii_ssp._yoelii_1_ 5
Plasmodium_chabaudi_ 4
Plasmodium_berghei_ANKA_ 5
Symbiodinium_minutum_clade_B1_v1.2 14
Naegleria_gruberi_ 2
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 6
Microcoleus_sp._PCC_7113 2
Geitlerinema_sp._PCC_7407 1
Gloeocapsa_sp._PCC_7428 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 1
Anabaena_sp._90 1
Catenulispora_acidiphila_DSM_44928 0
Haliscomenobacter_hydrossis_DSM_1100 1
Chitinophaga_pinensis_DSM_2588 1
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_fragilis_YCH46 1
Sphingobacterium_sp._21 1
Fluviicola_taffensis_DSM_16823 0
Croceibacter_atlanticus_HTCC2559 1
Rhodopirellula_baltica_SH_1 1
Desulfococcus_oleovorans_Hxd3 1
Geobacter_sp._M21 1
Geobacter_bemidjiensis_Bem 1
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Burkholderia_phymatum_STM815 1
Burkholderia_glumae_BGR1 1
Sideroxydans_lithotrophicus_ES-1 0
Hyphomonas_neptunium_ATCC_15444 1
Gluconacetobacter_xylinus_NBRC_3288 1
Gluconobacter_oxydans_621H 1
Methylocella_silvestris_BL2 1
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Vibrio_anguillarum_775 1
Shewanella_loihica_PV-4 0
Shewanella_sediminis_HAW-EB3 1
Shewanella_denitrificans_OS217 1
Shewanella_amazonensis_SB2B 1
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_atlantica_T6c 1
Glaciecola_sp._4H-3-7+YE-5 1
Glaciecola_nitratireducens_FR1064 1
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 1
Frateuria_aurantia_DSM_6220 2
Photorhabdus_asymbiotica 1
Xenorhabdus_nematophila_ATCC_19061 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4
Cryptococcus_neoformans_var._grubii_H99_ 4
Cryptococcus_neoformans_B-3501A_ 3
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 4
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 2
Histoplasma_capsulatum_H143 4
Histoplasma_capsulatum_H88 2
Histoplasma_capsulatum_G186AR 2
Aspergillus_fumigatus_A1163_ 4
Candida_albicans_WO-1_ 8
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 2
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_M22 0
Saccharomyces_cerevisiae_T73 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 0
Batrachochytrium_dendrobatidis_JEL423_ 3
Batrachochytrium_dendrobatidis_JAM81_ 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   72
Hordeum_vulgare_22   (Domesticated barley)   82
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   126
Neospora_caninum_Nc-Liverpool_6.2 2
Plasmodium_falciparum_HB3_ 5
Plasmodium_falciparum_Dd2_ 2
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Crinalium_epipsammum_PCC_9333 2
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 1
Mycobacterium_sp._JDM601 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Treponema_pedis_str._T_A4 0
Geobacter_sp._M18 1
Myxococcus_stipitatus_DSM_14675 0
Zymomonas_mobilis_subsp._mobilis_CP4 1
Paracoccus_aminophilus_JCM_7686 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2
Alteromonas_macleodii_str._'Black_Sea_11' 2
Alteromonas_macleodii_ATCC_27126 2
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   2
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   2
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   3
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   2
Drosophila_melanogaster_69_5   (Fruit fly)   3
Caenorhabditis_elegans_69_215   (Roundworm)   3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   49

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
Loa_loa_v3.3_(Request)   (Eye worm)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 6
Picea_sitchensis__(Incomplete)   (Sitka spruce)   5
Lotus_japonicus__(Early_assembly) 43
Malus_x_domestica_(Duplicate)   (Apple)   37
Ricinus_communis__(Early_assembly)   (Castor bean)   45
Nicotiana_benthamiana_0.4.4_(Early_draft) 56
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   69
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   69
Phoenix_dactylifera__(Early_draft)   (Date palm)   5
NCBI_plasmid_sequences_(Plasmids) 1
UniProt__viral_sequences_(Viral) 1
NCBI_viral_sequences_(Viral) 0
Protein_Data_Bank_(all_PDB_sequenc) 275
STRING_v9.0.5_(STRING) 1009
NCBI_2017_08_genome 9549
Protozoadb_2010_08_(Protozoadb) 65
Uniprot_2018_03_genome 43230
PDB_chains_(SCOP_1.75)_(PDB) 3
TargetDB__(Targets) 19

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