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Domain combinations for _gap_,51110,_gap_,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51110 - alpha-D-mannose-specific plant lectins
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Selaginella_moellendorffii_ 9
Pinus_taeda   (Loblolly pine)   5
Picea_abies   (Norway spruce)   20
Eucalyptus_grandis_v201   (Rose gum)   231
Theobroma_cacao_B97-61/B2_v1   (Cacao)   74
Gossypium_raimondii_v221 90
Citrus_clementina_v165 89
Citrus_sinensis_v154   (Sweet orange)   89
Thellungiella_halophila_v173 32
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   38
Capsella_rubella_v183 30
Arabidopsis_lyrata_   (Lyrate rockcress)   41
Arabidopsis_thaliana_10   (Thale cress)   34
Carica_papaya_   (Papaya)   16
Medicago_truncatula_   (Barrel medic)   172
Phaseolus_vulgaris_v186   (French bean)   82
Glycine_max_v109   (Soybean)   99
Cucumis_sativus_v122   (Cucumber)   39
Fragaria_vesca_   (Wild strawberry)   57
Malus_domestica_v196   (Apple)   114
Prunus_persica_v139   (Peach)   61
Linum_usitatissimum_v200   (Flax)   70
Manihot_esculenta_v147   (Cassava)   57
Populus_trichocarpa_v156   (Black cottonwood)   146
Vitis_vinifera_   (Wine grape)   18
Mimulus_guttatus_v140   (Spotted monkey flower)   34
Solanum_lycopersicum_v.2.3   (Tomato)   53
Solanum_tuberosum_   (Potato)   69
Actinidia_chinensis_Hongyang_ 17
Aquilegia_coerulea_v195 55
Triticum_urartu_22 93
Triticum_aestivum_22   (Bread wheat)   149
Aegilops_tauschii_22 102
Brachypodium_distachyon_   (Stiff brome)   71
Oryza_barthii_22   (African wild rice)   69
Oryza_meridionalis_22 72
Oryza_glumaepatula_22 66
Oryza_glaberrima   (African rice)   71
Oryza_punctata_22 57
Oryza_nivara_22 83
Oryza_brachyantha_22   (Malo sina)   55
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   101
Oryza_sativa_v193   (Rice)   100
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   37
Panicum_virgatum_v202   (Switchgrass)   65
Setaria_italica_v164   (Foxtail millet)   55
Zea_mays_subsp._mays_   (Maize)   47
Zea_mays_v181   (Maize)   48
Sorghum_bicolor_   (Sorghum)   58
Musa_balbisiana   (Balbis banana)   25
Musa_acuminata_22   (Wild Malaysian banana)   29
Amborella_trichopoda_22 12
Physcomitrella_patens 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   58
Hordeum_vulgare_22   (Domesticated barley)   139
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   101

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   30

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 20
Malus_x_domestica_(Duplicate)   (Apple)   114
Ricinus_communis__(Early_assembly)   (Castor bean)   37
Nicotiana_benthamiana_0.4.4_(Early_draft) 35
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   52
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   53
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
STRING_v9.0.5_(STRING) 549
NCBI_2017_08_genome 5916
Uniprot_2018_03_genome 61893

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