SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,51126,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51126 - Pectin lyase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   7
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   5
Otolemur_garnettii_76_3   (Small-eared galago)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   2
Tupaia_belangeri_76   (Northern tree shrew)   1
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   2
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_76_1   (Giant panda)   2
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   3
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   2
Sorex_araneus_76_1   (European shrew)   2
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   2
Loxodonta_africana_76_3   (African savanna elephant)   2
Echinops_telfairi_76   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   4
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 5
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   3
Gallus_gallus_76_4   (Chicken)   3
Anas_platyrhynchos_76_1.0   (Mallard)   3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   6
Anolis_carolinensis_76_2.0   (Green anole)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   4
Gadus_morhua_76_1   (Atlantic cod)   2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   4
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   3
Oikopleura_dioica 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Adineta_vaga 2
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   2
Helobdella_robusta_ 0
Capitella_sp._I_ 4
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 1
Drosophila_yakuba_1.3 1
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 0
Trichinella_spiralis_22 0
Mnemiopsis_leidyi   (Sea walnut)   2
Acropora_digitifera_v1.0 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Amphimedon_queenslandica 13
Trichoplax_adhaerens_ 1
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 2
Sphaeroforma_arctica_JP610_ 10
Capsaspora_owczarzaki_ATCC_30864_ 0
Sporisorium_reilianum_22 1
Ustilago_maydis_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 2
Pleurotus_ostreatus_   (Oyster mushroom)   1
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Postia_placenta_ 0
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 2
Verticillium_albo-atrum_VaMs.102_ 2
Nectria_haematococca_mpVI_ 1
Leptosphaeria_maculans_22 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Aspergillus_zonatus_v1.0 0
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Allomyces_macrogynus_ATCC_38327_ 1
Dictyostelium_discoideum 9
Dictyostelium_purpureum_ 7
Entamoeba_invadens_1.2 8
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   0
Gossypium_raimondii_v221 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Fragaria_vesca_   (Wild strawberry)   5
Malus_domestica_v196   (Apple)   2
Linum_usitatissimum_v200   (Flax)   1
Triticum_urartu_22 1
Oryza_meridionalis_22 0
Oryza_punctata_22 0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Coccomyxa_subellipsoidea_sp._C-169_v2 6
Chlorella_variabilis_sp._NC64A_ 3
Chlorella_vulgaris_ 5
Volvox_carteri_f._nagariensis_ 6
Volvox_carteri_v199 5
Chlamydomonas_reinhardtii_4.0 4
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 1
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 1
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 5
Bigelowiella_natans_CCMP2755_22 3
Cyanophora_paradoxa_ 5
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_cruzi_strain_CL_Brener 63
Ectocarpus_siliculosus 12
Aureococcus_anophagefferens_ 5
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 0
Hyaloperonospora_arabidopsidis_22 0
Phaeodactylum_tricornutumCCAP_1055/1 6
Fragilariopsis_cylindrus 2
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 1
Paramecium_tetraurelia_ 23
Tetrahymena_thermophila_SB210_1_ 64
Ichthyophthirius_multifiliis_strain_G5_ 2
Plasmodium_falciparum_3D7_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 10
Naegleria_gruberi_ 8
Trichomonas_vaginalis_ 5
Guillardia_theta_CCMP2712_v1.0_ 8
Emiliania_huxleyi_CCMP1516_ 19
Thermobaculum_terrenum_ATCC_BAA-798 1
Leptolyngbya_sp._PCC_7376 1
Pseudanabaena_sp._PCC_7367 1
Acaryochloris_marina_MBIC11017 3
Microcoleus_sp._PCC_7113 1
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 1
Rivularia_sp._PCC_7116 0
Calothrix_sp._PCC_7507 1
Nostoc_sp._PCC_7107 1
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 0
Mycoplasma_pulmonis_UAB_CTIP 1
Conexibacter_woesei_DSM_14684 3
Eggerthella_sp._YY7918 2
Olsenella_uli_DSM_7084 1
Ilumatobacter_coccineus 4
Catenulispora_acidiphila_DSM_44928 3
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 1
Streptosporangium_roseum_DSM_43021 3
Kitasatospora_setae_KM-6054 2
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_avermitilis_MA-4680 2
Streptomyces_scabiei_87.22 1
Pseudonocardia_dioxanivorans_CB1190 1
Amycolatopsis_mediterranei_U32 1
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 1
Propionibacterium_propionicum_F0230a 1
Propionibacterium_acnes_SK137 1
Microlunatus_phosphovorus_NM-1 1
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 3
Micromonospora_aurantiaca_ATCC_27029 3
Actinoplanes_sp._N902-109 2
Actinoplanes_sp._SE50/110 3
Actinoplanes_missouriensis_431 2
Mycobacterium_vanbaalenii_PYR-1 1
Corynebacterium_efficiens_YS-314 1
Sanguibacter_keddieii_DSM_10542 2
Beutenbergia_cavernae_DSM_12333 1
Microbacterium_testaceum_StLB037 3
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_bifidum_S17 0
Bifidobacterium_adolescentis_ATCC_15703 1
Actinomyces_sp._F0330 1
Anaerolinea_thermophila_UNI-1 2
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 2
Deinococcus_gobiensis_I-0 1
Deinococcus_maricopensis_DSM_21211 1
Deinococcus_proteolyticus_MRP 1
Deinococcus_radiodurans_R1 1
Oceanithermus_profundus_DSM_14977 0
Meiothermus_silvanus_DSM_9946 1
Meiothermus_ruber_DSM_1279 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Clostridium_cellulolyticum_H10 1
Clostridium_thermocellum_ATCC_27405 0
Ethanoligenens_harbinense_YUAN-3 1
Ruminococcus_sp. 1
Ruminococcus_albus_7 1
Desulfitobacterium_hafniense_Y51 1
Eubacterium_eligens_ATCC_27750 1
Eubacterium_limosum_KIST612 1
Filifactor_alocis_ATCC_35896 1
Clostridium_saccharolyticum_WM1 0
Clostridium_phytofermentans_ISDg 1
Clostridium_lentocellum_DSM_5427 2
Roseburia_intestinalis 2
Butyrivibrio_proteoclasticus_B316 2
Butyrivibrio_fibrisolvens 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Clostridium_sp._BNL1100 1
Clostridium_cellulovorans_743B 2
Mahella_australiensis_50-1_BON 1
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_owensensis_OL 1
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermoanaerobacterium_xylanolyticum_LX-11 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1
Thermoanaerobacter_italicus_Ab9 1
Enterococcus_faecium_Aus0004 1
Lactobacillus_casei_ATCC_334 0
Lactobacillus_rhamnosus_Lc_705 0
Streptococcus_suis_P1/7 1
Streptococcus_salivarius_57.I 1
Paenibacillus_sp._JDR-2 3
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 0
Halobacillus_halophilus_DSM_2266 1
Bacillus_sp._1NLA3E 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_halodurans_C-125 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_clausii_KSM-K16 2
Staphylococcus_haemolyticus_JCSC1435 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1
Candidatus_Cloacamonas_acidaminovorans 0
Melioribacter_roseus_P3M 3
Ignavibacterium_album_JCM_16511 1
Chlorobaculum_parvum_NCIB_8327 0
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 3
Chitinophaga_pinensis_DSM_2588 2
Rhodothermus_marinus_DSM_4252 3
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 3
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 2
Dyadobacter_fermentans_DSM_18053 3
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 1
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 1
Tannerella_forsythia_ATCC_43037 6
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 1
Porphyromonas_asaccharolytica_DSM_20707 0
Porphyromonas_gingivalis_ATCC_33277 1
Alistipes_finegoldii_DSM_17242 4
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 5
Bacteroides_thetaiotaomicron_VPI-5482 4
Bacteroides_fragilis_YCH46 2
Pedobacter_saltans_DSM_12145 7
Pedobacter_heparinus_DSM_2366 5
Sphingobacterium_sp._21 1
Owenweeksia_hongkongensis_DSM_17368 1
Lacinutrix_sp._5H-3-7-4 0
Maribacter_sp._HTCC2170 2
Robiginitalea_biformata_HTCC2501 0
Zobellia_galactanivorans 8
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 0
Flavobacteriaceae_bacterium_3519-10 1
Polaribacter_sp._MED152 0
Capnocytophaga_canimorsus_Cc5 1
Flavobacterium_johnsoniae_UW101 5
Fibrobacter_succinogenes_subsp._succinogenes_S85 4
Simkania_negevensis_Z 0
Chlamydophila_pecorum_E58 0
Chlamydophila_felis_Fe/C-56 1
Chlamydophila_abortus_S26/3 0
Chlamydia_psittaci_01DC11 0
Chlamydia_trachomatis_B/Jali20/OT 0
Phycisphaera_mikurensis_NBRC_102666 1
Isosphaera_pallida_ATCC_43644 2
Planctomyces_brasiliensis_DSM_5305 3
Planctomyces_limnophilus_DSM_3776 2
Rhodopirellula_baltica_SH_1 1
Pirellula_staleyi_DSM_6068 1
Methylacidiphilum_infernorum_V4 1
Coraliomargarita_akajimensis_DSM_45221 2
Opitutus_terrae_PB90-1 3
Akkermansia_muciniphila_ATCC_BAA-835 1
Turneriella_parva_DSM_21527 1
Treponema_primitia_ZAS-2 2
Treponema_brennaborense_DSM_12168 1
Treponema_denticola_ATCC_35405 2
Petrotoga_mobilis_SJ95 1
Thermovibrio_ammonificans_HB-1 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 2
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 2
Terriglobus_roseus_DSM_18391 3
Candidatus_Nitrospira_defluvii 1
Streptobacillus_moniliformis_DSM_12112 2
Sebaldella_termitidis_ATCC_33386 0
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 0
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 0
Campylobacter_hominis_ATCC_BAA-381 0
Campylobacter_concisus_13826 0
Wolinella_succinogenes_DSM_1740 0
Helicobacter_cetorum_MIT_00-7128 1
Helicobacter_cinaedi_PAGU611 0
Nitratiruptor_sp._SB155-2 1
Desulfobacca_acetoxidans_DSM_11109 2
Syntrophus_aciditrophicus_SB 1
Desulfomonile_tiedjei_DSM_6799 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfatibacillum_alkenivorans_AK-01 2
Desulfobacterium_autotrophicum_HRM2 0
Desulfococcus_oleovorans_Hxd3 1
Desulfovibrio_magneticus_RS-1 1
Desulfovibrio_africanus_str._Walvis_Bay 2
Geobacter_sp._M21 2
Geobacter_bemidjiensis_Bem 1
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 1
Haliangium_ochraceum_DSM_14365 2
Sorangium_cellulosum_'So_ce_56' 6
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 3
Myxococcus_xanthus_DK_1622 3
Myxococcus_fulvus_HW-1 1
Dechlorosoma_suillum_PS 0
Chromobacterium_violaceum_ATCC_12472 0
Neisseria_meningitidis_alpha14 0
Neisseria_meningitidis_FAM18 0
Neisseria_lactamica_020-06 0
Neisseria_gonorrhoeae_NCCP11945 0
Rubrivivax_gelatinosus_IL144 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 2
Burkholderia_sp._RPE64 5
Burkholderia_sp._CCGE1002 2
Burkholderia_thailandensis_E264 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_vietnamiensis_G4 3
Burkholderia_gladioli_BSR3 4
Burkholderia_glumae_BGR1 5
Delftia_sp._Cs1-4 1
Variovorax_paradoxus_S110 0
Collimonas_fungivorans_Ter331 0
Janthinobacterium_sp._Marseille 4
Pusillimonas_sp._T7-7 4
Taylorella_asinigenitalis_MCE3 0
Taylorella_equigenitalis_MCE9 0
Bordetella_petrii_DSM_12804 0
Bordetella_avium_197N 0
Bordetella_pertussis_Tohama_I 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 0
Methylotenera_versatilis_301 0
Parvularcula_bermudensis_HTCC2503 2
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 1
Erythrobacter_litoralis_HTCC2594 0
Sphingobium_sp._SYK-6 0
Sphingomonas_sp._MM-1 1
Dinoroseobacter_shibae_DFL_12 2
Phaeobacter_gallaeciensis_2.10 1
Jannaschia_sp._CCS1 1
Ruegeria_sp._TM1040 1
Ruegeria_pomeroyi_DSS-3 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Rhodobacter_capsulatus_SB_1003 1
Paracoccus_denitrificans_PD1222 2
Rhodospirillum_photometricum_DSM_122 0
Tistrella_mobilis_KA081020-065 1
Rhodospirillum_centenum_SW 1
Azospirillum_lipoferum_4B 3
Azospirillum_sp._B510 5
Azospirillum_brasilense_Sp245 5
Gluconacetobacter_diazotrophicus_PAl_5 0
Micavibrio_aeruginosavorus_ARL-13 1
Starkeya_novella_DSM_506 0
Xanthobacter_autotrophicus_Py2 0
Azorhizobium_caulinodans_ORS_571 0
Methylobacterium_sp._4-46 4
Methylobacterium_nodulans_ORS_2060 1
Parvibaculum_lavamentivorans_DS-1 0
Ochrobactrum_anthropi_ATCC_49188 0
Brucella_ovis_ATCC_25840 0
Brucella_abortus_S19 0
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 0
Agrobacterium_sp._H13-3 0
Agrobacterium_vitis_S4 1
Mesorhizobium_sp._BNC1 2
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 3
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Hyphomicrobium_denitrificans_ATCC_51888 4
Rhodopseudomonas_palustris_BisA53 8
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 3
Methylocystis_sp._SC2 1
Bartonella_tribocorum_CIP_105476 0
Bartonella_clarridgeiae_73 0
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 0
Bartonella_quintana_str._Toulouse 0
Bartonella_bacilliformis_KC583 0
Saccharophagus_degradans_2-40 3
Cellvibrio_japonicus_Ueda107 2
Haemophilus_influenzae_PittEE 0
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 0
Oceanimonas_sp._GK1 0
Ferrimonas_balearica_DSM_9799 1
Shewanella_woodyi_ATCC_51908 2
Shewanella_violacea_DSS12 1
Colwellia_psychrerythraea_34H 1
Glaciecola_sp._4H-3-7+YE-5 2
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Alteromonas_sp._SN2 2
Alteromonas_macleodii_str._'Deep_ecotype' 1
Hahella_chejuensis_KCTC_2396 1
Chromohalobacter_salexigens_DSM_3043 1
Methylococcus_capsulatus_str._Bath 0
Stenotrophomonas_maltophilia_K279a 1
Nitrosococcus_watsonii_C-113 1
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Edwardsiella_ictaluri_93-146 0
Edwardsiella_tarda_EIB202 1
Rahnella_sp._Y9602 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Serratia_proteamaculans_568 1
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pantoea_sp._At-9b 0
Pantoea_vagans_C9-1 2
Pantoea_ananatis_LMG_20103 1
Erwinia_tasmaniensis_Et1/99 1
Erwinia_sp._Ejp617 2
Erwinia_billingiae_Eb661 2
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 1
Cronobacter_turicensis_z3032 0
Cronobacter_sakazakii_ES15 0
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Shigella_sonnei_Ss046 0
Shigella_flexneri_5_str._8401 0
Shigella_dysenteriae_Sd197 0
Shigella_boydii_CDC_3083-94 0
Salmonella_bongori_NCTC_12419 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Klebsiella_variicola_At-22 1
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_sp._R4-368 0
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 1
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 0
Pseudomonas_sp._TKP 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_aeruginosa_UCBPP-PA14 0
Thioalkalimicrobium_cyclicum_ALM1 0
Candidatus_Korarchaeum_cryptofilum_OPF8 1
Acidilobus_saccharovorans_345-15 0
Thermoproteus_uzoniensis_768-20 1
Methanosaeta_thermophila_PT 1
Methanohalobium_evestigatum_Z-7303 1
Methanosarcina_acetivorans_C2A 1
Methanosarcina_barkeri_str._Fusaro 1
Methanosphaerula_palustris_E1-9c 2
Methanoculleus_marisnigri_JR1 0
Thermococcus_sp._4557 0
Thermococcus_gammatolerans_EJ3 0
Halopiger_xanaduensis_SH-6 0
Haloterrigena_turkmenica_DSM_5511 0
Natrialba_magadii_ATCC_43099 1
Haloquadratum_walsbyi_DSM_16790 1
Halogeometricum_borinquense_DSM_11551 0
Haloferax_mediterranei_ATCC_33500 1
Halalkalicoccus_jeotgali_B3 1
Methanotorris_igneus_Kol_5 1
Methanococcus_voltae_A3 1
Methanosphaera_stadtmanae_DSM_3091 7
Methanobrevibacter_sp._AbM4 1
Methanobrevibacter_ruminantium_M1 1
Methanobrevibacter_smithii_ATCC_35061 2

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Chroococcidiopsis_thermalis_PCC_7203 2
Dactylococcopsis_salina_PCC_8305 2
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._CC9902 0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 0
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_8801 0
Cyanobacterium_aponinum_PCC_10605 1
Cyanobacterium_stanieri_PCC_7202 1
Stanieria_cyanosphaera_PCC_7437 2
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Streptomyces_davawensis_JCM_4913 3
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_venezuelae_ATCC_10712 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_KPA171202 1
Actinoplanes_friuliensis_DSM_7358 1
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_gilvum_Spyr1 2
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1
Gardnerella_vaginalis_HMP9231 1
Gardnerella_vaginalis_ATCC_14019 1
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Bifidobacterium_longum_subsp._longum_BBMN68 1
Bifidobacterium_longum_subsp._longum_F8 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_asteroides_PRL2011 1
Bifidobacterium_bifidum_PRL2010 1
Bifidobacterium_bifidum_BGN4 0
Actinomyces_graevenitzii_C83_ 1
Actinomyces_viscosus_C505 1
Chthonomonas_calidirosea_T49 1
Erysipelothrix_rhusiopathiae_SY1027 1
Clostridium_thermocellum_DSM_1313 0
Ruminococcus_champanellensis_18P13 0
Desulfitobacterium_hafniense_DCB-2 0
Roseburia_intestinalis_XB6B4 2
Clostridium_autoethanogenum_DSM_10061 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1
Enterococcus_faecium_Aus0085 1
Enterococcus_faecium_DO 1
Enterococcus_faecalis_str._Symbioflor_1 1
Enterococcus_faecalis_D32 1
Enterococcus_faecalis_OG1RF 1
Enterococcus_faecalis_V583 2
Lactobacillus_paracasei_subsp._paracasei_8700:2 0
Lactobacillus_casei_LOCK919 0
Lactobacillus_casei_str._Zhang 0
Lactobacillus_rhamnosus_LOCK908 0
Lactobacillus_rhamnosus_LOCK900 0
Lactobacillus_rhamnosus_ATCC_8530 0
Lactobacillus_reuteri_TD1 1
Lactobacillus_reuteri_SD2112 1
Lactococcus_lactis_subsp._lactis_IO-1 1
Streptococcus_pneumoniae_INV200 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_TIGR4 1
Streptococcus_suis_T15 1
Streptococcus_suis_SC070731 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 1
Streptococcus_suis_SS12 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_GZ1 1
Streptococcus_suis_05ZYH33 1
Streptococcus_salivarius_CCHSS3 1
Streptococcus_salivarius_JIM8777 1
Thermobacillus_composti_KWC4 1
Paenibacillus_sp._Y412MC10 2
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_polymyxa_CR1 2
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Amphibacillus_xylanus_NBRC_15112 3
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 3
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_Y2 3
Bacillus_amyloliquefaciens_IT-45 1
Bacillus_amyloliquefaciens_XH7 3
Bacillus_amyloliquefaciens_LL3 2
Bacillus_amyloliquefaciens_TA208 3
Bacillus_amyloliquefaciens_DSM_7 3
Bacillus_licheniformis_9945A 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_thuringiensis_YBT-1518 1
Staphylococcus_warneri_SG1 1
Rhodothermus_marinus_SG0.5JP17-172 1
Echinicola_vietnamensis_DSM_17526 4
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 0
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 3
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 2
Bacteroides_fragilis_NCTC_9343 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 4
Chlamydia_pecorum_P787 0
Chlamydia_pecorum_W73 0
Chlamydia_pecorum_PV3056/3 0
Chlamydia_psittaci_01DC12 0
Chlamydia_psittaci_MN 0
Chlamydia_psittaci_84/55 0
Chlamydia_psittaci_08DC60 0
Chlamydia_psittaci_02DC15 0
Chlamydia_psittaci_C19/98 0
Chlamydia_psittaci_CP3 0
Chlamydophila_psittaci_RD1 0
Chlamydia_psittaci_Mat116 0
Chlamydophila_psittaci_6BC 0
Chlamydophila_psittaci_6BC 0
Chlamydia_trachomatis_C/TW-3 0
Chlamydia_trachomatis_L2/434/Bu(f) 0
Chlamydia_trachomatis_L2/434/Bu(i) 0
Chlamydia_trachomatis_IU888 0
Chlamydia_trachomatis_IU824 0
Chlamydia_trachomatis_L2b/Canada2 0
Chlamydia_trachomatis_L2b/Canada1 0
Chlamydia_trachomatis_L3/404/LN 0
Chlamydia_trachomatis_L2b/Ams5 0
Chlamydia_trachomatis_L2b/Ams4 0
Chlamydia_trachomatis_L2b/Ams3 0
Chlamydia_trachomatis_L2b/Ams2 0
Chlamydia_trachomatis_L2b/Ams1 0
Chlamydia_trachomatis_L2b/795 0
Chlamydia_trachomatis_L2b/CV204 0
Chlamydia_trachomatis_L2b/LST 0
Chlamydia_trachomatis_L2b/UCH-2 0
Chlamydia_trachomatis_L2b/8200/07 0
Chlamydia_trachomatis_L2/25667R 0
Chlamydia_trachomatis_L1/224 0
Chlamydia_trachomatis_L1/115 0
Chlamydia_trachomatis_L1/440/LN 0
Chlamydia_trachomatis_K/SotonK1 0
Chlamydia_trachomatis_Ia/SotonIa3 0
Chlamydia_trachomatis_Ia/SotonIa1 0
Chlamydia_trachomatis_G/SotonG1 0
Chlamydia_trachomatis_F/SotonF3 0
Chlamydia_trachomatis_F/SW5 0
Chlamydia_trachomatis_F/SW4 0
Chlamydia_trachomatis_E/SotonE8 0
Chlamydia_trachomatis_E/SotonE4 0
Chlamydia_trachomatis_E/SW3 0
Chlamydia_trachomatis_D/SotonD6 0
Chlamydia_trachomatis_D/SotonD5 0
Chlamydia_trachomatis_D/SotonD1 0
Chlamydia_trachomatis_A/5291 0
Chlamydia_trachomatis_A/363 0
Chlamydia_trachomatis_RC-J/971 0
Chlamydia_trachomatis_RC-L2/55 0
Chlamydia_trachomatis_J/6276tet1 0
Chlamydia_trachomatis_RC-J/966 0
Chlamydia_trachomatis_RC-J(s)/122 0
Chlamydia_trachomatis_RC-F(s)/342 0
Chlamydia_trachomatis_RC-L2(s)/3 0
Chlamydia_trachomatis_RC-J/953 0
Chlamydia_trachomatis_RC-J943 0
Chlamydia_trachomatis_RC-Fs852 0
Chlamydia_trachomatis_RC-L2s46 0
Chlamydia_trachomatis_RC-F69 0
Chlamydia_trachomatis_L2c 0
Chlamydia_trachomatis_D-LC 0
Chlamydia_trachomatis_D-EC 0
Chlamydia_trachomatis_G/9301 0
Chlamydia_trachomatis_G/11074 0
Chlamydia_trachomatis_G/11222 0
Chlamydia_trachomatis_G/9768 0
Chlamydia_trachomatis_E/150 0
Chlamydia_trachomatis_E/11023 0
Chlamydia_trachomatis_B/TZ1A828/OT 0
Chlamydia_trachomatis_Sweden2 0
Chlamydia_trachomatis_E/Bour 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_A2497 0
Chlamydia_trachomatis_L2b/UCH-1/proctitis 0
Chlamydia_trachomatis_434/Bu 0
Chlamydia_trachomatis_A/HAR-13 0
Chlamydia_trachomatis_D/UW-3/CX 0
Singulisphaera_acidiphila_DSM_18658 3
Treponema_pedis_str._T_A4 0
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 0
Fusobacterium_nucleatum_subsp._animalis_4_8 0
Bdellovibrio_bacteriovorus_str._Tiberius 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1
Desulfobacula_toluolica_Tol2 1
Sorangium_cellulosum_So0157-2 4
Anaeromyxobacter_dehalogenans_2CP-C 2
Myxococcus_stipitatus_DSM_14675 1
Neisseria_meningitidis_WUE_2594 0
Neisseria_meningitidis_G2136 0
Neisseria_meningitidis_M04-240196 0
Neisseria_meningitidis_M01-240149 0
Neisseria_meningitidis_NZ-05/33 0
Neisseria_meningitidis_M01-240355 0
Neisseria_meningitidis_8013 0
Neisseria_meningitidis_053442 0
Neisseria_meningitidis_Z2491 0
Neisseria_meningitidis_H44/76 0
Neisseria_meningitidis_alpha710 0
Neisseria_meningitidis_MC58 0
Neisseria_gonorrhoeae_TCDC-NG08107 0
Neisseria_gonorrhoeae_FA_1090 0
Burkholderia_phenoliruptrix_BR3459a 2
Pandoraea_pnomenusa_3kgm 0
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 2
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 3
Ralstonia_solanacearum_GMI1000 3
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 2
Burkholderia_sp._KJ006 2
Burkholderia_thailandensis_MSMB121 2
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Taylorella_asinigenitalis_14/45 0
Taylorella_equigenitalis_14/56 0
Taylorella_equigenitalis_ATCC_35865 0
Bordetella_pertussis_CS 0
Bordetella_parapertussis_18323 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Zymomonas_mobilis_subsp._mobilis_CP4 0
Phaeobacter_gallaeciensis_DSM_17395 1
Phaeobacter_gallaeciensis_DSM_26640 1
Leisingera_methylohalidivorans_DSM_14336 1
Octadecabacter_antarcticus_307 1
Rhodobacter_sphaeroides_ATCC_17025 0
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Gluconacetobacter_diazotrophicus_PAl_5 0
Micavibrio_aeruginosavorus_EPB 1
Sinorhizobium_meliloti_2011 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Mesorhizobium_australicum_WSM2073 1
Hyphomicrobium_nitrativorans_NL23 0
Rhodopseudomonas_palustris_TIE-1 0
Rhodopseudomonas_palustris_HaA2 4
Rhodopseudomonas_palustris_BisB5 0
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 2
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 3
Bartonella_australis_Aust/NH1 1
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 0
Bartonella_quintana_RM-11 0
Simiduia_agarivorans_SA1_=_DSM_21679 1
Haemophilus_somnus_2336 0
Mannheimia_haemolytica_USMARC_2286 0
Mannheimia_haemolytica_M42548 0
Mannheimia_haemolytica_D174 0
Mannheimia_haemolytica_D171 0
Mannheimia_haemolytica_D153 0
Mannheimia_haemolytica_USDA-ARS-USMARC-183 0
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Pasteurella_multocida_36950 0
Pasteurella_multocida_subsp._multocida_str._Pm70 0
Haemophilus_influenzae_KR494 0
Haemophilus_influenzae_F3047 0
Haemophilus_influenzae_F3031 0
Haemophilus_influenzae_10810 0
Haemophilus_influenzae_86-028NP 0
Haemophilus_influenzae_R2866 0
Haemophilus_influenzae_R2846 0
Haemophilus_influenzae_Rd_KW20 0
Actinobacillus_suis_H91-0380 0
Vibrio_nigripulchritudo_VibrioScope 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'English_Channel_673' 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 3
Alcanivorax_dieselolei_B5 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Proteus_mirabilis_BB2000 1
Morganella_morganii_subsp._morganii_KT 0
Edwardsiella_tarda_C07-087 0
Edwardsiella_tarda_FL6-60 0
Rahnella_aquatilis_HX2 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_plymuthica_S13 1
Serratia_plymuthica_4Rx13 1
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 3
Serratia_liquefaciens_ATCC_27592 2
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_PA13 2
Pantoea_ananatis_AJ13355 1
Erwinia_pyrifoliae_DSM_12163 1
Erwinia_amylovora_CFBP1430 1
Cronobacter_sakazakii_CMCC_45402 2
Cronobacter_sakazakii_SP291 0
Cronobacter_sakazakii_ATCC_BAA-894 0
Shigella_sonnei_53G 0
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Shigella_dysenteriae_1617 0
Shigella_boydii_Sb227 0
Salmonella_bongori_N268-08 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 0
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 0
Klebsiella_pneumoniae_342 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Enterobacter_aerogenes_EA1509E 3
Escherichia_coli_E24377A 0
Escherichia_coli_JJ1886 0
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_NA114 1
Escherichia_coli_P12b 0
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_UMNK88 0
Escherichia_coli_ABU_83972 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE15 0
Escherichia_coli_SE11 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_536 0
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_CFT073 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_SCF1 0
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 3
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_W619 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_aeruginosa_SCV20265 3
Pseudomonas_aeruginosa_MTB-1 2
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 2
Pseudomonas_aeruginosa_LESB58 2
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Cycloclasticus_zancles_7-ME 1
Methanomethylovorans_hollandica_DSM_15978 0
Thermococcus_sp._AM4 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1
Halovivax_ruber_XH-70 0
Haloquadratum_walsbyi_C23 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   2
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   2
Tupaia_belangeri_69   (Northern tree shrew)   1
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2
Ailuropoda_melanoleuca_69_1   (Giant panda)   2
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   2
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   2
Sorex_araneus_69_1   (European shrew)   2
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   2
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   2
Gallus_gallus_69_2   (Chicken)   3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_69_1   (Coelacanth)   2
Gadus_morhua_69_1   (Atlantic cod)   2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   0
Drosophila_melanogaster_69_5   (Fruit fly)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   6
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Malus_x_domestica_(Duplicate)   (Apple)   2
NCBI_plasmid_sequences_(Plasmids) 35
PDB_chains_(SCOP_1.75)_(PDB) 10
Protein_Data_Bank_(all_PDB_sequenc) 41
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 57
UniProt__viral_sequences_(Viral) 40
TargetDB__(Targets) 5
NCBI_viral_sequences_(Viral) 103
Protozoadb_2010_08_(Protozoadb) 161
STRING_v9.0.5_(STRING) 414
Uniprot_2018_03_genome 56705
NCBI_2017_08_genome 22694

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