SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,51283 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51283 - dUTPase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   1
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Canis_familiaris_76_3.1   (Dog)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Capitella_sp._I_ 0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Tribolium_castaneum_3.0   (Red flour beetle)   1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Onchocerca_volvulus_22 1
Mnemiopsis_leidyi   (Sea walnut)   0
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 1
Amphimedon_queenslandica 0
Conidiobolus_coronatus_NRRL28638_v1.0 2
Mortierella_verticillata_NRRL_6337_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 1
Wolfiporia_cocos_MD-104_SS10__v1.0 3
Tremella_mesenterica_   (Witches' butter)   0
Magnaporthe_poae_ATCC_64411_22 1
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 1
Neurospora_crassa_OR74A_ 1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Septoria_musiva_v1.0 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Aspergillus_zonatus_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Penicillium_marneffei_ATCC_18224_ 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   28
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Allomyces_macrogynus_ATCC_38327_ 1
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Entamoeba_histolytica_1 1
Pinus_taeda   (Loblolly pine)   1
Eucalyptus_grandis_v201   (Rose gum)   1
Gossypium_raimondii_v221 1
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   2
Phaseolus_vulgaris_v186   (French bean)   1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   2
Linum_usitatissimum_v200   (Flax)   2
Aquilegia_coerulea_v195 1
Triticum_urartu_22 3
Triticum_aestivum_22   (Bread wheat)   3
Aegilops_tauschii_22 2
Oryza_barthii_22   (African wild rice)   1
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Musa_balbisiana   (Balbis banana)   0
Amborella_trichopoda_22 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Bathycoccus_prasinos_ 1
Porphyridium_purpureum_02_2012 1
Bigelowiella_natans_CCMP2755_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 1
Guillardia_theta_CCMP2712_v1.0_ 0
Microcoleus_sp._PCC_7113 1
Halothece_sp._PCC_7418 0
Nostoc_sp._PCC_7107 0
Frankia_sp._EAN1pec 1
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Corynebacterium_urealyticum_DSM_7109 1
Isoptericola_variabilis_225 1
[Cellvibrio]_gilvus_ATCC_13127 1
Arthrobacter_sp._Rue61a 1
Renibacterium_salmoninarum_ATCC_33209 1
Acidaminococcus_intestini_RyC-MR95 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Thermaerobacter_marianensis_DSM_12885 1
Pelotomaculum_thermopropionicum_SI 1
Thermovibrio_ammonificans_HB-1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Rhodospirillum_photometricum_DSM_122 1
Halomonas_elongata_DSM_2581 1
Alkalilimnicola_ehrlichii_MLHE-1 1
Haloarcula_marismortui_ATCC_43049 1

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Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Paracoccidioides_brasiliensis_Pb01_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Chamaesiphon_minutus_PCC_6605 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Clostridium_botulinum_BKT015925 0
Bacillus_amyloliquefaciens_DSM_7 0
Brucella_ceti_TE28753-12 1
Bartonella_quintana_RM-11 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Ochotona_princeps_69   (American pika)   1
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   3
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Malus_x_domestica_(Duplicate)   (Apple)   2
NCBI_plasmid_sequences_(Plasmids) 3
Uniprot_2018_03_genome 2730
Protozoadb_2010_08_(Protozoadb) 4
Protein_Data_Bank_(all_PDB_sequenc) 4
TargetDB__(Targets) 6
STRING_v9.0.5_(STRING) 35
NCBI_viral_sequences_(Viral) 37
UniProt__viral_sequences_(Viral) 64
NCBI_2017_08_genome 596

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