SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,51419,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51419 - PLP-binding barrel

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Danio_rerio_76_9   (Zebrafish)   1
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 2
Rhizomucor_miehei_CAU432_ 1
Sporisorium_reilianum_22 1
Ustilago_maydis_ 1
Sphaerobolus_stellatus_v1.0 1
Piloderma_croceum_F_1598_v1.0 1
Coniophora_puteana 1
Hydnomerulius_pinastri_v2.0 1
Pisolithus_microcarpus_441_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Amanita_thiersii_Skay4041_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1
Galerina_marginata_v1.0 1
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 1
Fomitiporia_mediterranea_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 1
Trametes_versicolor_v1.0 1
Tremella_mesenterica_   (Witches' butter)   1
Daldinia_eschscholzii_EC12_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 1
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 1
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Verticillium_dahliae_VdLs.17_ 1
Glomerella_graminicola_22 1
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 1
Trichoderma_atroviride_ 2
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Sclerotinia_sclerotiorum_ 1
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_tritici-repentis_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 2
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_clavatus_NRRL_1_ 1
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_tropicalis_MYA-3404_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 2
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 1
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 1
Kluyveromyces_waltii 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 1
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Allomyces_macrogynus_ATCC_38327_ 1
Spizellomyces_punctatus_DAOM_BR117_ 1
Selaginella_moellendorffii_ 2
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 1
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   2
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4
Capsella_rubella_v183 2
Arabidopsis_lyrata_   (Lyrate rockcress)   2
Arabidopsis_thaliana_10   (Thale cress)   3
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   5
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   1
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   2
Actinidia_chinensis_Hongyang_ 3
Aquilegia_coerulea_v195 1
Triticum_aestivum_22   (Bread wheat)   1
Aegilops_tauschii_22 2
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 1
Oryza_nivara_22 0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   2
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   3
Amborella_trichopoda_22 0
Physcomitrella_patens 1
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 1
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 2
Ectocarpus_siliculosus 0
Albugo_laibachii_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 1
Thalassiosira_pseudonana_CCMP1335 1
Ichthyophthirius_multifiliis_strain_G5_ 1
Plasmodium_falciparum_3D7_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 1
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 1
Acaryochloris_marina_MBIC11017 0
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 0
Thermosynechococcus_elongatus_BP-1 0
Synechococcus_sp._PCC_7502 0
Synechococcus_sp._PCC_6312 0
Synechococcus_sp._CC9311 0
Synechococcus_elongatus_PCC_7942 0
Prochlorococcus_marinus_str._MIT_9515 0
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 0
cyanobacterium_UCYN-A 1
Halothece_sp._PCC_7418 0
Microcystis_aeruginosa_NIES-843 0
Gloeobacter_violaceus_PCC_7421 0
Rivularia_sp._PCC_7116 0
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 0
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7107 0
Nostoc_punctiforme_PCC_73102 0
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 0
Conexibacter_woesei_DSM_14684 2
Ilumatobacter_coccineus 0
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 2
Stackebrandtia_nassauensis_DSM_44728 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 2
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 1
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 1
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 2
Microlunatus_phosphovorus_NM-1 1
Salinispora_tropica_CNB-440 1
Actinoplanes_sp._N902-109 1
Tsukamurella_paurometabola_DSM_20162 2
Gordonia_sp._KTR9 1
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 1
Rhodococcus_erythropolis_PR4 2
Nocardia_farcinica_IFM_10152 1
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis 1
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_ulcerans_Agy99 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 1
Mycobacterium_smegmatis_str._MC2_155 2
Corynebacterium_kroppenstedtii_DSM_44385 1
Corynebacterium_glutamicum_R 1
Sanguibacter_keddieii_DSM_10542 1
Beutenbergia_cavernae_DSM_12333 2
Brachybacterium_faecium_DSM_4810 1
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 1
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Renibacterium_salmoninarum_ATCC_33209 2
Truepera_radiovictrix_DSM_17093 0
Deinococcus_gobiensis_I-0 0
Deinococcus_deserti_VCD115 0
Deinococcus_maricopensis_DSM_21211 0
Deinococcus_geothermalis_DSM_11300 0
Deinococcus_proteolyticus_MRP 0
Deinococcus_radiodurans_R1 0
Marinithermus_hydrothermalis_DSM_14884 0
Meiothermus_silvanus_DSM_9946 0
Meiothermus_ruber_DSM_1279 0
Thermus_sp._CCB_US3_UF1 0
Thermus_scotoductus_SA-01 0
Thermus_thermophilus_HB27 0
Clostridium_cellulolyticum_H10 0
Clostridium_sp._BNL1100 0
Gemmatimonas_aurantiaca_T-27 0
Rhodothermus_marinus_DSM_4252 0
Cyclobacterium_marinum_DSM_745 1
Odoribacter_splanchnicus_DSM_20712 1
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 0
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 0
Prevotella_ruminicola_23 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Parachlamydia_acanthamoebae_UV-7 1
Simkania_negevensis_Z 0
Phycisphaera_mikurensis_NBRC_102666 0
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Methylacidiphilum_infernorum_V4 1
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Spirochaeta_smaragdinae_DSM_11293 1
Sphaerochaeta_pleomorpha_str._Grapes 1
Sphaerochaeta_globus_str._Buddy 0
Spirochaeta_caldaria_DSM_7334 0
Spirochaeta_africana_DSM_8902 0
Spirochaeta_thermophila_DSM_6192 0
Desulfurispirillum_indicum_S5 0
Calditerrivibrio_nitroreducens_DSM_19672 0
Denitrovibrio_acetiphilus_DSM_12809 0
Deferribacter_desulfuricans_SSM1 0
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_mallensis_MP5ACTX8 1
Acidobacterium_capsulatum_ATCC_51196 1
Acidithiobacillus_ferrivorans_SS3 0
Acidithiobacillus_caldus_SM-1 0
Acidithiobacillus_ferrooxidans_ATCC_53993 0
Bacteriovorax_marinus_SJ 0
Bdellovibrio_bacteriovorus_HD100 0
Nautilia_profundicola_AmH 0
Nitratifractor_salsuginis_DSM_16511 0
Sulfurospirillum_deleyianum_DSM_6946 0
Sulfurospirillum_barnesii_SES-3 0
Arcobacter_sp._L 0
Arcobacter_nitrofigilis_DSM_7299 0
Arcobacter_butzleri_RM4018 0
Campylobacter_hominis_ATCC_BAA-381 0
Campylobacter_lari_RM2100 0
Campylobacter_concisus_13826 0
Campylobacter_jejuni_subsp._doylei_269.97 0
Campylobacter_sp._03-427 0
Campylobacter_fetus_subsp._fetus_82-40 0
uncultured_Sulfuricurvum_sp._RIFRC-1 0
Sulfuricurvum_kujiense_DSM_16994 0
Sulfurimonas_autotrophica_DSM_16294 0
Sulfurimonas_denitrificans_DSM_1251 0
Wolinella_succinogenes_DSM_1740 0
Helicobacter_cetorum_MIT_00-7128 0
Helicobacter_hepaticus_ATCC_51449 0
Helicobacter_mustelae_12198 0
Helicobacter_felis_ATCC_49179 0
Helicobacter_cinaedi_PAGU611 0
Helicobacter_acinonychis_str._Sheeba 0
Helicobacter_pylori_B38 0
Nitratiruptor_sp._SB155-2 0
Sulfurovum_sp._NBC37-1 0
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfobulbus_propionicus_DSM_2032 0
Desulfobacterium_autotrophicum_HRM2 0
Desulfomicrobium_baculatum_DSM_4028 0
Desulfovibrio_piezophilus 0
Desulfovibrio_aespoeensis_Aspo-2 0
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 0
Desulfovibrio_africanus_str._Walvis_Bay 0
Geobacter_daltonii_FRC-32 0
Geobacter_sp._M21 0
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 0
Geobacter_bemidjiensis_Bem 0
Geobacter_sulfurreducens_KN400 0
Geobacter_metallireducens_GS-15 0
Pelobacter_propionicus_DSM_2379 0
Pelobacter_carbinolicus_DSM_2380 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Pseudogulbenkiania_sp._NH8B 0
Laribacter_hongkongensis_HLHK9 0
Chromobacterium_violaceum_ATCC_12472 1
Neisseria_meningitidis_alpha14 0
Neisseria_meningitidis_FAM18 0
Neisseria_gonorrhoeae_NCCP11945 0
Rubrivivax_gelatinosus_IL144 2
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 1
Verminephrobacter_eiseniae_EF01-2 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_sp._JS666 2
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 2
Collimonas_fungivorans_Ter331 1
Herbaspirillum_seropedicae_SmR1 1
Bordetella_petrii_DSM_12804 1
Bordetella_avium_197N 1
Achromobacter_xylosoxidans_A8 2
Achromobacter_xylosoxidans 2
Nitrosomonas_sp._Is79A3 0
Nitrosomonas_eutropha_C91 0
Magnetococcus_marinus_MC-1 0
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 1
Sphingomonas_wittichii_RW1 1
Pseudovibrio_sp._FO-BEG1 0
Ruegeria_pomeroyi_DSS-3 0
Azospirillum_brasilense_Sp245 1
Methylobacterium_radiotolerans_JCM_2831 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 1
Mesorhizobium_loti_MAFF303099 1
Bradyrhizobium_japonicum_USDA_110 1
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 1
Gallibacterium_anatis_UMN179 0
Pasteurella_multocida_subsp._multocida_str._3480 0
Oceanimonas_sp._GK1 0
Tolumonas_auensis_DSM_9187 0
Aeromonas_veronii_B565 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1
Aliivibrio_salmonicida_LFI1238 0
Vibrio_fischeri_MJ11 0
Vibrio_sp._Ex25 1
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_splendidus_LGP32 1
Vibrio_anguillarum_775 1
Vibrio_furnissii_NCTC_11218 2
Vibrio_vulnificus_MO6-24/O 2
Vibrio_cholerae_O395 1
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 0
Idiomarina_loihiensis_L2TR 0
Ferrimonas_balearica_DSM_9799 0
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 1
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 1
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Shewanella_violacea_DSS12 1
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 1
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Marinobacter_aquaeolei_VT8 1
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Kangiella_koreensis_DSM_16069 0
Hahella_chejuensis_KCTC_2396 0
Alcanivorax_borkumensis_SK2 1
Marinomonas_sp._MWYL1 0
Marinomonas_mediterranea_MMB-1 0
Chromohalobacter_salexigens_DSM_3043 0
Halomonas_elongata_DSM_2581 0
Methylococcus_capsulatus_str._Bath 0
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 0
Pseudoxanthomonas_spadix_BD-a59 0
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 0
Xylella_fastidiosa_M23 0
Xanthomonas_axonopodis_pv._citri_str._306 0
Xanthomonas_albilineans_GPE_PC73 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 0
Xanthomonas_campestris_pv._campestris_str._B100 0
Alkalilimnicola_ehrlichii_MLHE-1 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Thioalkalivibrio_sp._K90mix 1
Halorhodospira_halophila_SL1 0
Thiocystis_violascens_DSM_198 1
Nitrosococcus_watsonii_C-113 0
Nitrosococcus_halophilus_Nc4 0
Nitrosococcus_oceani_ATCC_19707 0
Legionella_longbeachae_NSW150 1
Legionella_pneumophila_str._Corby 2
gamma_proteobacterium_HdN1 2
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Xenorhabdus_bovienii_SS-2004 0
Xenorhabdus_nematophila_ATCC_19061 0
Providencia_stuartii_MRSN_2154 0
Proteus_mirabilis_HI4320 0
Edwardsiella_ictaluri_93-146 0
Edwardsiella_tarda_EIB202 0
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 0
Serratia_plymuthica_AS9 0
Serratia_proteamaculans_568 1
Dickeya_dadantii_Ech703 1
Dickeya_zeae_Ech1591 0
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Sodalis_glossinidius_str._'morsitans' 0
Pantoea_sp._At-9b 1
Pantoea_vagans_C9-1 0
Pantoea_ananatis_LMG_20103 1
Erwinia_tasmaniensis_Et1/99 0
Erwinia_sp._Ejp617 0
Erwinia_billingiae_Eb661 0
Erwinia_pyrifoliae_Ep1/96 0
Erwinia_amylovora_ATCC_49946 0
Escherichia_blattae_DSM_4481 0
Cronobacter_turicensis_z3032 0
Cronobacter_sakazakii_ES15 0
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Shigella_sonnei_Ss046 0
Shigella_flexneri_5_str._8401 0
Shigella_dysenteriae_Sd197 0
Shigella_boydii_CDC_3083-94 0
Salmonella_bongori_NCTC_12419 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Klebsiella_oxytoca_E718 0
Klebsiella_variicola_At-22 0
Klebsiella_pneumoniae_NTUH-K2044 0
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_sp._R4-368 1
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_rodentium_ICC168 0
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 0
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_stutzeri_A1501 0
Pseudomonas_fulva_12-X 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 0
Methylophaga_sp._JAM1 0
Thermogladius_cellulolyticus_1633 0
Thermosphaera_aggregans_DSM_11486 1
Staphylothermus_hellenicus_DSM_12710 1
Staphylothermus_marinus_F1 1
Desulfurococcus_fermentans_DSM_16532 1
Desulfurococcus_kamchatkensis_1221n 1
Desulfurococcus_mucosus_DSM_2162 1
Methanosaeta_harundinacea_6Ac 1
Methanosaeta_thermophila_PT 1
Methanosaeta_concilii_GP6 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Schizosaccharomyces_pombe_972h-_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 0
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Cyanobium_gracile_PCC_6307 0
Dactylococcopsis_salina_PCC_8305 0
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._CC9902 0
Synechococcus_sp._RCC307 0
Synechococcus_sp._CC9605 0
Synechococcus_sp._WH_8102 0
Synechococcus_sp._WH_7803 0
Synechococcus_sp._PCC_7002 0
Synechococcus_elongatus_PCC_6301 0
Prochlorococcus_marinus_str._NATL1A 0
Prochlorococcus_marinus_str._MIT_9301 0
Prochlorococcus_marinus_str._AS9601 0
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 0
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 0
Prochlorococcus_marinus_str._MIT_9215 0
Prochlorococcus_marinus_str._MIT_9211 0
Prochlorococcus_marinus_str._MIT_9313 0
Prochlorococcus_marinus_str._MIT_9312 0
Prochlorococcus_marinus_str._MIT_9303 0
Prochlorococcus_marinus_str._NATL2A 0
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 0
Frankia_sp._EuI1c 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 1
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 2
Deinococcus_peraridilitoris_DSM_19664 0
Thermus_oshimai_JL-2 0
Thermus_thermophilus_JL-18 0
Thermus_thermophilus_SG0.5JP17-16 0
Thermus_thermophilus_HB8 0
Rhodothermus_marinus_SG0.5JP17-172 0
Prevotella_sp._oral_taxon_299_str._F0039 0
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Spirochaeta_thermophila_DSM_6578 0
Acidithiobacillus_ferrooxidans_ATCC_23270 0
Bdellovibrio_exovorus_JSS 0
Bdellovibrio_bacteriovorus_str._Tiberius 1
Arcobacter_butzleri_7h1h 0
Arcobacter_butzleri_ED-1 0
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 0
Campylobacter_jejuni_RM1221 0
Campylobacter_jejuni_subsp._jejuni_00-2544 0
Campylobacter_jejuni_subsp._jejuni_00-2538 0
Campylobacter_jejuni_subsp._jejuni_00-2426 0
Campylobacter_jejuni_subsp._jejuni_00-2425 0
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Campylobacter_jejuni_subsp._jejuni_M1 0
Campylobacter_jejuni_subsp._jejuni_IA3902 0
Campylobacter_jejuni_subsp._jejuni_81116 0
Campylobacter_jejuni_subsp._jejuni_81-176 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 0
Campylobacter_coli_76339 0
Campylobacter_coli_15-537360 0
Campylobacter_coli_CVM_N29710 0
Helicobacter_cetorum_MIT_99-5656 0
Helicobacter_pylori_BM012S 0
Helicobacter_pylori_BM012A 0
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM298 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM037 0
Helicobacter_pylori_UM299 0
Helicobacter_pylori_UM032 0
Helicobacter_pylori_OK310 0
Helicobacter_pylori_OK113 0
Helicobacter_pylori_Rif2 0
Helicobacter_pylori_Rif1 0
Helicobacter_pylori_HUP-B14 0
Helicobacter_pylori_PeCan18 0
Helicobacter_pylori_Shi169 0
Helicobacter_pylori_Shi112 0
Helicobacter_pylori_Shi417 0
Helicobacter_pylori_XZ274 0
Helicobacter_pylori_Aklavik86 0
Helicobacter_pylori_Aklavik117 0
Helicobacter_pylori_SNT49 0
Helicobacter_pylori_Puno135 0
Helicobacter_pylori_Puno120 0
Helicobacter_pylori_ELS37 0
Helicobacter_pylori_Gambia94/24 0
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_India7 0
Helicobacter_pylori_Lithuania75 0
Helicobacter_pylori_2017 0
Helicobacter_pylori_2018 0
Helicobacter_pylori_908 0
Helicobacter_pylori_F57 0
Helicobacter_pylori_F30 0
Helicobacter_pylori_F16 0
Helicobacter_pylori_Sat464 0
Helicobacter_pylori_Cuz20 0
Helicobacter_pylori_PeCan4 0
Helicobacter_pylori_SJM180 0
Helicobacter_pylori_B8 0
Helicobacter_pylori_52 0
Helicobacter_pylori_v225d 0
Helicobacter_pylori_83 0
Helicobacter_pylori_35A 0
Helicobacter_pylori_P12 0
Helicobacter_pylori_G27 0
Helicobacter_pylori_Shi470 0
Helicobacter_pylori_HPAG1 0
Helicobacter_pylori_51 0
Helicobacter_pylori_F32 0
Helicobacter_pylori_J99 0
Helicobacter_pylori_26695 0
Helicobacter_pylori_26695 0
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 0
Desulfovibrio_vulgaris_RCH1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Desulfovibrio_vulgaris_str._Hildenborough 1
Desulfovibrio_desulfuricans_ND132 0
Geobacter_sp._M18 0
Geobacter_sulfurreducens_PCA 0
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Neisseria_meningitidis_WUE_2594 0
Neisseria_meningitidis_G2136 0
Neisseria_meningitidis_M04-240196 0
Neisseria_meningitidis_M01-240149 0
Neisseria_meningitidis_NZ-05/33 0
Neisseria_meningitidis_M01-240355 0
Neisseria_meningitidis_8013 0
Neisseria_meningitidis_053442 0
Neisseria_meningitidis_Z2491 0
Neisseria_meningitidis_H44/76 0
Neisseria_meningitidis_alpha710 0
Neisseria_meningitidis_MC58 0
Neisseria_gonorrhoeae_TCDC-NG08107 0
Neisseria_gonorrhoeae_FA_1090 0
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 2
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Bradyrhizobium_japonicum_USDA_6 1
Simiduia_agarivorans_SA1_=_DSM_21679 1
Pasteurella_multocida_36950 0
Pasteurella_multocida_subsp._multocida_str._HN06 0
Pasteurella_multocida_subsp._multocida_str._Pm70 0
Aeromonas_hydrophila_ML09-119 1
Vibrio_fischeri_ES114 0
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_nigripulchritudo_VibrioScope 1
Vibrio_vulnificus_CMCP6 2
Vibrio_vulnificus_YJ016 2
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 1
Vibrio_cholerae_O395 1
Vibrio_cholerae_IEC224 1
Vibrio_cholerae_O1_str._2010EL-1786 1
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Idiomarina_loihiensis_GSL_199 0
Shewanella_sp._W3-18-1 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_str._'English_Channel_615' 0
Alteromonas_macleodii_AltDE1 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Alcanivorax_dieselolei_B5 2
Stenotrophomonas_maltophilia_D457 0
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Xylella_fastidiosa_subsp._fastidiosa_GB514 0
Xylella_fastidiosa_M12 0
Xylella_fastidiosa_Temecula1 0
Xylella_fastidiosa_9a5c 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 0
Xanthomonas_oryzae_pv._oryzae_KACC_10331 0
Xanthomonas_campestris_pv._raphani_756C 0
Xanthomonas_campestris_pv._campestris_str._8004 0
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 0
Thioalkalivibrio_nitratireducens_DSM_14787 0
Thioflavicoccus_mobilis_8321 0
Legionella_pneumophila_str._Paris 1
Legionella_pneumophila_str._Lens 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1
Legionella_pneumophila_2300/99_Alcoy 2
Proteus_mirabilis_BB2000 0
Morganella_morganii_subsp._morganii_KT 0
Edwardsiella_tarda_C07-087 0
Edwardsiella_tarda_FL6-60 0
Rahnella_aquatilis_HX2 1
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 1
Dickeya_dadantii_Ech586 1
Dickeya_dadantii_3937 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Pantoea_ananatis_LMG_5342 1
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 1
Erwinia_pyrifoliae_DSM_12163 0
Erwinia_amylovora_CFBP1430 0
Cronobacter_sakazakii_CMCC_45402 0
Cronobacter_sakazakii_SP291 0
Cronobacter_sakazakii_ATCC_BAA-894 0
Raoultella_ornithinolytica_B6 0
Shigella_sonnei_53G 0
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Shigella_dysenteriae_1617 0
Shigella_boydii_Sb227 0
Salmonella_bongori_N268-08 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 0
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 0
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 0
Klebsiella_oxytoca_KCTC_1686 0
Klebsiella_pneumoniae_JM45 0
Klebsiella_pneumoniae_CG43 0
Klebsiella_pneumoniae_KCTC_2242 0
Klebsiella_pneumoniae_342 0
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 0
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 0
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E24377A 0
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_JJ1886 0
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_NA114 0
Escherichia_coli_P12b 0
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_UM146 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_IHE3034 0
Escherichia_coli_UMNK88 0
Escherichia_coli_O83:H1_str._NRG_857C 0
Escherichia_coli_ABU_83972 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_LF82 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 0
Escherichia_coli_S88 0
Escherichia_coli_IAI1 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE15 0
Escherichia_coli_SE11 0
Escherichia_coli_APEC_O1 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_UTI89 0
Escherichia_coli_536 0
Escherichia_coli_HS 0
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_CFT073 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_SCF1 0
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ENHKU01 0
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Azotobacter_vinelandii_CA6 0
Azotobacter_vinelandii_CA 0
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 1
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_resinovorans_NBRC_106553 1
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Methylophaga_sp._JAM7 0
Cycloclasticus_zancles_7-ME 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Danio_rerio_69_9   (Zebrafish)   1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   2

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   5
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 20
Uniprot_2018_03_genome 21515
NCBI_2017_08_genome 18874
Protein_Data_Bank_(all_PDB_sequenc) 4
Protozoadb_2010_08_(Protozoadb) 0
TargetDB__(Targets) 20
STRING_v9.0.5_(STRING) 196

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]