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Domain combinations for _gap_,52058,_gap_,56112,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Procavia_capensis_76_1   (Cape rock hyrax)   0
Proterospongia_sp._ATCC_50818_ 2
Dictyostelium_discoideum 2
Dictyostelium_purpureum_ 1
Entamoeba_invadens_1.2 0
Selaginella_moellendorffii_ 7
Pinus_taeda   (Loblolly pine)   3
Picea_abies   (Norway spruce)   2
Eucalyptus_grandis_v201   (Rose gum)   12
Theobroma_cacao_B97-61/B2_v1   (Cacao)   9
Gossypium_raimondii_v221 28
Citrus_clementina_v165 9
Citrus_sinensis_v154   (Sweet orange)   8
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   11
Capsella_rubella_v183 11
Arabidopsis_lyrata_   (Lyrate rockcress)   6
Arabidopsis_thaliana_10   (Thale cress)   9
Carica_papaya_   (Papaya)   4
Medicago_truncatula_   (Barrel medic)   11
Phaseolus_vulgaris_v186   (French bean)   8
Glycine_max_v109   (Soybean)   14
Cucumis_sativus_v122   (Cucumber)   6
Fragaria_vesca_   (Wild strawberry)   11
Malus_domestica_v196   (Apple)   19
Prunus_persica_v139   (Peach)   10
Linum_usitatissimum_v200   (Flax)   16
Manihot_esculenta_v147   (Cassava)   10
Populus_trichocarpa_v156   (Black cottonwood)   11
Vitis_vinifera_   (Wine grape)   10
Mimulus_guttatus_v140   (Spotted monkey flower)   10
Solanum_lycopersicum_v.2.3   (Tomato)   13
Solanum_tuberosum_   (Potato)   8
Actinidia_chinensis_Hongyang_ 11
Aquilegia_coerulea_v195 8
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   5
Aegilops_tauschii_22 6
Brachypodium_distachyon_   (Stiff brome)   6
Oryza_barthii_22   (African wild rice)   23
Oryza_meridionalis_22 7
Oryza_glumaepatula_22 19
Oryza_glaberrima   (African rice)   9
Oryza_punctata_22 11
Oryza_nivara_22 28
Oryza_brachyantha_22   (Malo sina)   10
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   18
Oryza_sativa_v193   (Rice)   19
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   11
Panicum_virgatum_v202   (Switchgrass)   8
Setaria_italica_v164   (Foxtail millet)   10
Zea_mays_subsp._mays_   (Maize)   8
Zea_mays_v181   (Maize)   11
Sorghum_bicolor_   (Sorghum)   9
Musa_balbisiana   (Balbis banana)   13
Musa_acuminata_22   (Wild Malaysian banana)   9
Amborella_trichopoda_22 1
Physcomitrella_patens 7
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_variabilis_sp._NC64A_ 4
Chlorella_vulgaris_ 0
Ectocarpus_siliculosus 1
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 2
Phytophthora_infestans_T30-4_ 3
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 2

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   6
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   16

Longest transcript per gene
Genome     Number
Procavia_capensis_69_1   (Cape rock hyrax)   0
Arabidopsis_thaliana_10   (Thale cress)   9

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 4
Malus_x_domestica_(Duplicate)   (Apple)   19
Ricinus_communis__(Early_assembly)   (Castor bean)   11
Nicotiana_benthamiana_0.4.4_(Early_draft) 13
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   12
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   13
STRING_v9.0.5_(STRING) 94
NCBI_2017_08_genome 1287
Uniprot_2018_03_genome 16718
TargetDB__(Targets) 2

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