SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,52540,_gap_,52540,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   42
Pan_troglodytes_76_2.1.4   (Chimpanzee)   18
Gorilla_gorilla_76_3.1   (Western gorilla)   27
Pongo_abelii_76_2   (Sumatran orangutan)   14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   15
Papio_anubis_76   (Olive baboon)   21
Macaca_mulatta_76_1   (Rhesus monkey)   19
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   27
Otolemur_garnettii_76_3   (Small-eared galago)   16
Microcebus_murinus_76_1   (Gray mouse lemur)   13
Rattus_norvegicus_76_5.0   (Norway rat)   25
Mus_musculus_76_38   (House mouse)   39
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   15
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   21
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   14
Cavia_porcellus_76_3   (Domestic guinea pig)   17
Oryctolagus_cuniculus_76_2   (Rabbit)   16
Ochotona_princeps_76   (American pika)   12
Tupaia_belangeri_76   (Northern tree shrew)   6
Sus_scrofa_76_10.2   (Pig)   16
Bos_taurus_76_3.1   (Cattle)   19
Ovis_aries_76_3.1   (Sheep)   24
Vicugna_pacos_76_1   (Alpaca)   10
Tursiops_truncatus_76_1   (Bottlenose dolphin)   10
Mustela_putorius_furo_76_1.0   (Domestic ferret)   18
Ailuropoda_melanoleuca_76_1   (Giant panda)   19
Canis_familiaris_76_3.1   (Dog)   24
Felis_catus_76_6.2   (Domestic cat)   19
Equus_caballus_76_2   (Horse)   23
Myotis_lucifugus_76_2.0   (Little brown bat)   17
Pteropus_vampyrus_76_1   (Large flying fox)   21
Sorex_araneus_76_1   (European shrew)   14
Erinaceus_europaeus_76   (Western European hedgehog)   14
Procavia_capensis_76_1   (Cape rock hyrax)   15
Loxodonta_africana_76_3   (African savanna elephant)   26
Echinops_telfairi_76   (Small Madagascar hedgehog)   11
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   18
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   9
Macropus_eugenii_76_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   20
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   21
Ornithorhynchus_anatinus_76_5   (Platypus)   10
Saccoglossus_kowalevskii_v3.0 30
Petromyzon_marinus_76_7.0   (Sea lamprey)   4
Meleagris_gallopavo_76_2   (Turkey)   14
Gallus_gallus_76_4   (Chicken)   16
Anas_platyrhynchos_76_1.0   (Mallard)   13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   14
Ficedula_albicollis_76_1.0   (Collared flycatcher)   18
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   16
Anolis_carolinensis_76_2.0   (Green anole)   12
Xenopus_laevis_   (African clawed frog)   5
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   18
Latimeria_chalumnae_76_1   (Coelacanth)   16
Lepisosteus_oculatus_76   (Spotted gar)   13
Gadus_morhua_76_1   (Atlantic cod)   14
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   20
Takifugu_rubripes_76_4   (Torafugu)   65
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   16
Oryzias_latipes_76_1   (Japanese medaka)   16
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   14
Poecilia_formosa_76   (Amazon molly)   14
Oreochromis_niloticus_76_1.0   (Nile tilapia)   19
Astyanax_mexicanus_76   (Mexican tetra)   18
Danio_rerio_76_9   (Zebrafish)   19
Oikopleura_dioica 8
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   15
Ciona_intestinalis_76   (Vase tunicate)   6
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   8
Adineta_vaga 26
Octopus_bimaculoides_280 9
Crassostrea_gigas_22   (Pacific oyster)   10
Lottia_gigantea_   (Owl limpet)   9
Helobdella_robusta_ 5
Capitella_sp._I_ 12
Danaus_plexippus_OGS1.0   (Monarch butterfly)   7
Heliconius_melpomene_   (Postman butterfly)   5
Bombyx_mori_   (Domestic silkworm)   1
Nasonia_vitripennis_   (Jewel wasp)   8
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   15
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   12
Linepithema_humile_v1.1   (Argentine ant)   4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   8
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   6
Atta_cephalotes_v1.1 6
Camponotus_floridanus_v3.3   (Florida carpenter ant)   6
Lucilia_cuprina   (Australian sheep blowfly)   7
Drosophila_grimshawi_1.3 10
Drosophila_willistoni_1.3 12
Drosophila_pseudoobscura_2.13 15
Drosophila_persimilis_1.3 9
Drosophila_suzukii 9
Drosophila_yakuba_1.3 13
Drosophila_simulans_1.3 5
Drosophila_sechellia_1.3 9
Drosophila_melanogaster_76_5   (Fruit fly)   25
Drosophila_erecta_1.3 13
Drosophila_ananassae_1.3 11
Drosophila_virilis_1.2 8
Drosophila_mojavensis_1.3 10
Megaselia_scalaris_22 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   18
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   15
Anopheles_darlingi_22   (American malaria mosquito)   5
Anopheles_gambiae_49_3j   (African malaria mosquito)   14
Tribolium_castaneum_3.0   (Red flour beetle)   11
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6
Acyrthosiphon_pisum_   (Pea aphid)   8
Rhodnius_prolixus_22 4
Daphnia_pulex_   (Common water flea)   8
Strigamia_maritima_22 8
Sarcoptes_scabiei 6
Tetranychus_urticae_   (Two-spotted spider mite)   7
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3
Pristionchus_pacificus_ 3
Meloidogyne_incognita_   (Southern root-knot nematode)   4
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 6
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   14
Caenorhabditis_japonica_ 7
Caenorhabditis_brenneri_ 12
Caenorhabditis_remanei_ 10
Caenorhabditis_elegans_76_235   (Roundworm)   13
Caenorhabditis_briggsae_2 10
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 5
Echinococcus_multilocularis_ 5
Echinococcus_granulosus_ 6
Taenia_solium_   (Pork tapeworm)   3
Schistosoma_mansoni_ 5
Mnemiopsis_leidyi   (Sea walnut)   2
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   3
Hydra_vulgaris 3
Amphimedon_queenslandica 11
Trichoplax_adhaerens_ 6
Proterospongia_sp._ATCC_50818_ 8
Monosiga_brevicollis_ 6
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 13
Mortierella_verticillata_NRRL_6337_ 8
Phycomyces_blakesleeanus_ 5
Rhizopus_oryzae_RA_99-880_ 9
Mucor_circinelloides_ 6
Rhizomucor_miehei_CAU432_ 7
Malassezia_globosa_CBS_7966_ 8
Sporisorium_reilianum_22 6
Ustilago_maydis_ 8
Mixia_osmundae_IAM_14324_v1.0 6
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 5
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4
Melampsora_laricis-populina_ 4
Rhodotorula_graminis_WP1_v1.0 6
Sporobolomyces_roseus_IAM_13481_ 7
Microbotryum_violaceum_22 5
Wallemia_sebi_v1.0 5
Sphaerobolus_stellatus_v1.0 7
Piloderma_croceum_F_1598_v1.0 11
Serpula_lacrymans_var._lacrymans_S7.9_ 5
Coniophora_puteana 9
Hydnomerulius_pinastri_v2.0 8
Paxillus_rubicundulus_Ve08.2h10_v1.0 7
Pisolithus_microcarpus_441_v1.0 3
Pisolithus_tinctorius_Marx_270_v1.0 3
Scleroderma_citrinum_Foug_A_v1.0 3
Coprinopsis_cinerea_okayama7_130_v3 8
Pleurotus_ostreatus_   (Oyster mushroom)   5
Amanita_thiersii_Skay4041_v1.0 6
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6
Galerina_marginata_v1.0 7
Hebeloma_cylindrosporum_h7_v2.0 10
Laccaria_bicolor_S238N-H82_ 5
Agaricus_bisporus_var._bisporus_ 4
Schizophyllum_commune_ 7
Stereum_hirsutum_FP-91666_SS1__v1.0 8
Heterobasidion_annosum_ 6
Gloeophyllum_trabeumv1.0 6
Punctularia_strigosozonata_v1.0 5
Sebacina_vermifera_MAFF_305830_v1.0 3
Fomitiporia_mediterranea_v1.0 6
Tulasnella_calospora_AL13/4D_v1.0 4
Postia_placenta_ 9
Wolfiporia_cocos_MD-104_SS10__v1.0 5
Fomitopsis_pinicolav1.0 6
Fomitopsis_pinicola_FP-58527_SS1_v3.0 6
Phanerochaete_chrysosporium_RP-78_2.1 5
Dichomitus_squalens 6
Trametes_versicolor_v1.0 5
Tremella_mesenterica_   (Witches' butter)   3
Daldinia_eschscholzii_EC12_v1.0 11
Apiospora_montagnei_NRRL_25634_v1.0 11
Magnaporthe_poae_ATCC_64411_22 8
Magnaporthe_grisea_70-15_ 10
Podospora_anserina_ 7
Sporotrichum_thermophile_ATCC_42464_ 7
Thielavia_terrestris_NRRL_8126_ 9
Chaetomium_globosum_CBS_148.51_ 6
Neurospora_tetrasperma_ 7
Neurospora_discreta_FGSC_8579_ 8
Neurospora_crassa_OR74A_ 9
Cryphonectria_parasitica_   (Chestnut blight fungus)   8
Verticillium_albo-atrum_VaMs.102_ 6
Verticillium_dahliae_VdLs.17_ 15
Acremonium_alcalophilumv_1.0 9
Glomerella_graminicola_22 17
Fusarium_graminearum_ 14
Nectria_haematococca_mpVI_ 22
Fusarium_oxysporum_f._sp._lycopersici_4286_ 14
Fusarium_verticillioides_7600_ 15
Trichoderma_asperellum_CBS_433.97_v1.0 11
Trichoderma_atroviride_ 10
Trichoderma_citrinoviride_v1.0 9
Trichoderma_reesei_1.2 10
Trichoderma_virens_Gv29-8_ 10
Trichoderma_longibrachiatum_ATCC_18648_v1.0 10
Trichoderma_harzianum_CBS_226.95_v1.0 14
Amorphotheca_resinae_v1.0   (Creosote fungus)   10
Botrytis_cinerea_B05.10_ 9
Sclerotinia_sclerotiorum_ 8
Blumeria_graminis_22 4
Didymella_exigua_CBS_183.55_v1.0 8
Leptosphaeria_maculans_22 11
Setosphaeria_turcica_v1.0 9
Cochliobolus_miyabeanus_ATCC_44560_v1.0 12
Cochliobolus_victoriae_FI3_v1.0 11
Cochliobolus_carbonum_26-R-13_v1.0 11
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   9
Alternaria_brassicicola_ 5
Cochliobolus_lunatus_m118_v2.0 12
Pyrenophora_teres_f._teres_22 9
Pyrenophora_tritici-repentis_ 10
Stagonospora_nodorum_ 10
Mycosphaerella_graminicola_IPO323_ 7
Zasmidium_cellare_ATCC_36951_v1.0 14
Dothistroma_septosporum 12
Septoria_musiva_v1.0 7
Mycosphaerella_fijiensis_CIRAD86_ 8
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 9
Paracoccidioides_brasiliensis_Pb18_ 8
Coccidioides_posadasii_RMSCC_3488_ 10
Coccidioides_immitis_RS_ 12
Ajellomyces_dermatitidis_SLH14081_ 12
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 5
Microsporum_canis_CBS_113480_ 10
Trichophyton_equinum_CBS_127.97_ 7
Trichophyton_verrucosum_HKI_0517_ 8
Arthroderma_benhamiae_CBS_112371_ 6
Trichophyton_tonsurans_CBS_112818_ 9
Trichophyton_rubrum_CBS_118892_ 8
Uncinocarpus_reesii_1704_ 6
Aspergillus_zonatus_v1.0 12
Penicillium_chrysogenum_Wisconsin_54-1255_ 18
Penicillium_chrysogenum_v1.0 17
Aspergillus_acidus_v1.0 19
Aspergillus_fumigatus_Af293 15
Aspergillus_brasiliensis_v1.0 21
Aspergillus_nidulans_FGSC_A4_ 17
Aspergillus_sydowii_v1.0 17
Aspergillus_versicolor_v1.0 19
Aspergillus_glaucus 15
Aspergillus_carbonarius_ITEM_5010_ 16
Neosartorya_fischeri_NRRL_181_ 18
Aspergillus_terreus_NIH2624_ 20
Aspergillus_tubingensis_v1.0 19
Aspergillus_wentii_v1.0 17
Aspergillus_oryzae_RIB40_ 19
Aspergillus_niger_22 19
Aspergillus_niger_ATCC_1015_ 14
Aspergillus_flavus_NRRL3357_ 15
Aspergillus_clavatus_NRRL_1_ 17
Penicillium_marneffei_ATCC_18224_ 11
Tuber_melanosporum_Mel28_22 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4
Hansenula_polymorpha_v2.0 4
Dekkera_bruxellensis_CBS_2499_v2.0 6
Pichia_membranifaciensv1.0 8
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3
Candida_dubliniensis_CD36_ 5
Candida_tropicalis_MYA-3404_ 11
Candida_parapsilosis_ 7
Candida_albicans_SC5314 6
Lodderomyces_elongisporus_NRRL_YB-4239_ 5
Babjeviella_inositovora_NRRL_Y-12698_v1.0 6
Pichia_stipitis_CBS_6054_ 8
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 6
Debaromyces_hansenii 8
Wickerhamomyces_anomalus 6
Pichia_pastoris_GS115_ 6
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 6
Yarrowia_lipolytica_CLIB122 7
Candida_lusitaniae_ATCC_42720_ 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3
Vanderwaltozyma_polyspora_DSM_70294_ 4
Candida_glabrata_CBS138 5
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 7
Kluyveromyces_waltii 4
Ashbya_gossypii_ATCC_10895_ 3
Zygosaccharomyces_rouxii_ 10
Saccharomyces_mikatae_MIT 2
Saccharomyces_paradoxus_MIT 3
Saccharomyces_cerevisiae_76   (Baker's yeast)   6
Saccharomyces_bayanus_MIT 1
Kluyveromyces_lactis 4
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 2
Schizosaccharomyces_japonicus_yFS275_ 2
Schizosaccharomyces_pombe   (Fission yeast)   2
Catenaria_anguillulae_PL171_v1.0 6
Allomyces_macrogynus_ATCC_38327_ 8
Spizellomyces_punctatus_DAOM_BR117_ 8
Dictyostelium_discoideum 22
Dictyostelium_purpureum_ 19
Entamoeba_dispar_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 44
Pinus_taeda   (Loblolly pine)   15
Picea_abies   (Norway spruce)   6
Eucalyptus_grandis_v201   (Rose gum)   49
Theobroma_cacao_B97-61/B2_v1   (Cacao)   23
Gossypium_raimondii_v221 58
Citrus_clementina_v165 38
Citrus_sinensis_v154   (Sweet orange)   41
Thellungiella_halophila_v173 14
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   22
Capsella_rubella_v183 16
Arabidopsis_lyrata_   (Lyrate rockcress)   16
Arabidopsis_thaliana_10   (Thale cress)   24
Carica_papaya_   (Papaya)   5
Medicago_truncatula_   (Barrel medic)   42
Phaseolus_vulgaris_v186   (French bean)   26
Glycine_max_v109   (Soybean)   38
Cucumis_sativus_v122   (Cucumber)   18
Fragaria_vesca_   (Wild strawberry)   11
Malus_domestica_v196   (Apple)   3
Prunus_persica_v139   (Peach)   30
Linum_usitatissimum_v200   (Flax)   24
Manihot_esculenta_v147   (Cassava)   28
Populus_trichocarpa_v156   (Black cottonwood)   32
Vitis_vinifera_   (Wine grape)   30
Mimulus_guttatus_v140   (Spotted monkey flower)   22
Solanum_lycopersicum_v.2.3   (Tomato)   27
Solanum_tuberosum_   (Potato)   12
Actinidia_chinensis_Hongyang_ 23
Aquilegia_coerulea_v195 37
Triticum_urartu_22 17
Triticum_aestivum_22   (Bread wheat)   21
Aegilops_tauschii_22 18
Brachypodium_distachyon_   (Stiff brome)   23
Oryza_barthii_22   (African wild rice)   46
Oryza_meridionalis_22 38
Oryza_glumaepatula_22 38
Oryza_glaberrima   (African rice)   13
Oryza_punctata_22 43
Oryza_nivara_22 41
Oryza_brachyantha_22   (Malo sina)   18
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   15
Oryza_sativa_v193   (Rice)   16
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   18
Panicum_virgatum_v202   (Switchgrass)   18
Setaria_italica_v164   (Foxtail millet)   21
Zea_mays_subsp._mays_   (Maize)   16
Zea_mays_v181   (Maize)   20
Sorghum_bicolor_   (Sorghum)   25
Musa_balbisiana   (Balbis banana)   15
Musa_acuminata_22   (Wild Malaysian banana)   17
Amborella_trichopoda_22 14
Physcomitrella_patens 15
Coccomyxa_subellipsoidea_sp._C-169_v2 7
Asterochloris_sp._Cgr/DA1pho_v1.0 10
Chlorella_variabilis_sp._NC64A_ 10
Chlorella_vulgaris_ 10
Volvox_carteri_f._nagariensis_ 5
Volvox_carteri_v199 5
Chlamydomonas_reinhardtii_4.0 13
Ostreococcus_sp._RCC809_ 2
Ostreococcus_lucimarinus_CCE9901_ 2
Ostreococcus_tauri_ 4
Bathycoccus_prasinos_ 4
Micromonas_sp._RCC299_ 4
Micromonas_pusilla_CCMP1545_v3.0 6
Cyanidioschyzon_merolae_strain_10D_22 3
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 4
Thecamonas_trahens_ATCC_50062_ 6
Bigelowiella_natans_CCMP2755_22 6
Giardia_lamblia_2.3 7
Cyanophora_paradoxa_ 2
Leishmania_mexicana_2.4 14
Leishmania_major_strain_Friedlin_ 16
Leishmania_infantum_JPCM5_2.4 15
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 13
Trypanosoma_vivax_ 3
Trypanosoma_cruzi_strain_CL_Brener 3
Trypanosoma_congolense_2.4 4
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 5
Ectocarpus_siliculosus 17
Aureococcus_anophagefferens_ 5
Albugo_laibachii_22 12
Pythium_iwayamai_DAOM_BR242034_22 9
Pythium_arrhenomanes_ATCC_12531_22 10
Pythium_ultimum_v1.7-2 45
Pythium_aphanidermatum_DAOM_BR444_22 19
Pythium_irregulare_DAOM_BR486_22 17
Pythium_vexans_DAOM_BR484_22 24
Phytophthora_ramorum_1.1   (Sudden oak death agent)   51
Phytophthora_sojae_1.1 37
Phytophthora_infestans_T30-4_ 36
Phytophthora_capsici_ 25
Hyaloperonospora_arabidopsidis_22 16
Phaeodactylum_tricornutumCCAP_1055/1 4
Fragilariopsis_cylindrus 4
Thalassiosira_pseudonana_CCMP1335 2
Perkinsus_marinus_ATCC_50983_ 3
Paramecium_tetraurelia_ 19
Tetrahymena_thermophila_SB210_1_ 26
Ichthyophthirius_multifiliis_strain_G5_ 0
Cryptosporidium_hominis 0
Cryptosporidium_muris 2
Cryptosporidium_parvum_Iowa_II 2
Neospora_caninum 12
Toxoplasma_gondii_VEG 10
Toxoplasma_gondii_ME49 10
Toxoplasma_gondii_GT1 11
Babesia_bovis_T2Bo_ 4
Theileria_parva__ 2
Theileria_annulata 4
Plasmodium_falciparum_3D7_ 10
Plasmodium_vivax_SaI-1_7.0 9
Plasmodium_knowlesi_strain_H_ 11
Plasmodium_yoelii_ssp._yoelii_1_ 3
Plasmodium_chabaudi_ 9
Plasmodium_berghei_ANKA_ 9
Symbiodinium_minutum_clade_B1_v1.2 8
Naegleria_gruberi_ 6
Trichomonas_vaginalis_ 6
Guillardia_theta_CCMP2712_v1.0_ 7
Emiliania_huxleyi_CCMP1516_ 7
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 2
Gloeocapsa_sp._PCC_7428 0
Halothece_sp._PCC_7418 1
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 0
Nostoc_sp._PCC_7120 1
Anabaena_sp._90 1
Ureaplasma_parvum_serovar_3_str._ATCC_27815 1
Ureaplasma_urealyticum_serovar_10_str._ATCC_33699 1
Eggerthella_sp._YY7918 0
Eggerthella_lenta_DSM_2243 0
Kineococcus_radiotolerans_SRS30216 0
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_alni_ACN14a 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Pseudonocardia_dioxanivorans_CB1190 0
Nocardioides_sp._JS614 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 1
Actinoplanes_sp._SE50/110 0
Gordonia_sp._KTR9 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 0
Nocardia_farcinica_IFM_10152 0
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 0
Microbacterium_testaceum_StLB037 1
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_aurescens_TC1 0
Arthrobacter_sp._FB24 0
Bifidobacterium_longum_subsp._longum_JDM301 2
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1
Anaerolinea_thermophila_UNI-1 1
Thermomicrobium_roseum_DSM_5159 1
Sphaerobacter_thermophilus_DSM_20745 2
Deinococcus_proteolyticus_MRP 0
Oceanithermus_profundus_DSM_14977 1
Marinithermus_hydrothermalis_DSM_14884 0
Meiothermus_silvanus_DSM_9946 1
Thermus_sp._CCB_US3_UF1 0
Finegoldia_magna_ATCC_29328 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2
Natranaerobius_thermophilus_JW/NM-WN-LF 1
Symbiobacterium_thermophilum_IAM_14863 1
Clostridium_clariflavum_DSM_19732 1
Eubacterium_siraeum 1
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 1
Ethanoligenens_harbinense_YUAN-3 0
Ruminococcus_albus_7 0
Sulfobacillus_acidophilus_DSM_10332 1
Oscillibacter_valericigenes_Sjm18-20 0
Thermincola_potens_JR 1
Dehalobacter_sp._DCA 0
Dehalobacter_sp._CF 0
Syntrophobotulus_glycolicus_DSM_8271 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_kuznetsovii_DSM_6115 2
Eubacterium_limosum_KIST612 1
Clostridium_difficile_630 0
Filifactor_alocis_ATCC_35896 0
Clostridium_saccharolyticum_WM1 0
[Ruminococcus]_obeum 0
[Ruminococcus]_torques 0
Eubacterium_rectale_M104/1 0
Eubacterium_rectale_ATCC_33656 0
Roseburia_hominis_A2-183 0
Roseburia_intestinalis 0
Heliobacterium_modesticaldum_Ice1 1
Alkaliphilus_oremlandii_OhILAs 1
Clostridium_sp._BNL1100 0
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_cellulovorans_743B 1
Thermosediminibacter_oceani_DSM_16646 1
Thermodesulfobium_narugense_DSM_14796 1
Thermoanaerobacter_sp._X514 1
Enterococcus_sp._7L76 0
Leuconostoc_kimchii_IMSNU_11154 1
Lactobacillus_kefiranofaciens_ZW3 0
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 0
Streptococcus_equi_subsp._equi_4047 0
Streptococcus_macedonicus_ACA-DC_198 0
Streptococcus_mitis_B6 1
Streptococcus_pneumoniae_P1031 0
Kyrpidia_tusciae_DSM_2912 1
Listeria_innocua_Clip11262 1
Oceanobacillus_iheyensis_HTE831 1
Geobacillus_sp._GHH01 1
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_cereus_03BB102 1
Candidatus_Cloacamonas_acidaminovorans 1
Gemmatimonas_aurantiaca_T-27 1
Ignavibacterium_album_JCM_16511 1
Chlorobium_phaeobacteroides_DSM_266 1
Saprospira_grandis_str._Lewin 0
Flexibacter_litoralis_DSM_6794 1
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 0
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 0
Dyadobacter_fermentans_DSM_18053 1
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 1
Tannerella_forsythia_ATCC_43037 1
Odoribacter_splanchnicus_DSM_20712 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 0
Porphyromonas_gingivalis_ATCC_33277 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 0
Pedobacter_saltans_DSM_12145 0
Zunongwangia_profunda_SM-A87 0
Ornithobacterium_rhinotracheale_DSM_15997 1
Weeksella_virosa_DSM_16922 1
Flavobacterium_branchiophilum_FL-15 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Chlamydophila_caviae_GPIC 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_limnophilus_DSM_3776 0
Methylacidiphilum_infernorum_V4 0
Opitutus_terrae_PB90-1 1
Thermovirga_lienii_DSM_17291 1
Brachyspira_murdochii_DSM_12563 1
Sphaerochaeta_pleomorpha_str._Grapes 1
Spirochaeta_caldaria_DSM_7334 1
Treponema_primitia_ZAS-2 1
Treponema_succinifaciens_DSM_2489 0
Thermodesulfobacterium_sp._OPB45 1
Sulfurihydrogenibium_sp._YO3AOP1 1
Hydrogenobaculum_sp._SN 1
Hydrogenobaculum_sp._HO 1
Thermocrinis_albus_DSM_14484 1
Dictyoglomus_thermophilum_H-6-12 1
Terriglobus_roseus_DSM_18391 1
Leptotrichia_buccalis_C-1013-b 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1
Candidatus_Methylomirabilis_oxyfera 1
Arcobacter_sp._L 1
Campylobacter_hominis_ATCC_BAA-381 0
Campylobacter_lari_RM2100 0
Helicobacter_cetorum_MIT_00-7128 0
Helicobacter_bizzozeronii_CIII-1 0
Desulfobacca_acetoxidans_DSM_11109 1
Desulfobacterium_autotrophicum_HRM2 0
Geobacter_lovleyi_SZ 0
Geobacter_sulfurreducens_KN400 1
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 1
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_fulvus_HW-1 1
Dechloromonas_aromatica_RCB 0
Thauera_sp._MZ1T 0
Aromatoleum_aromaticum_EbN1 0
Neisseria_lactamica_020-06 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1
Methylibium_petroleiphilum_PM1 0
Thiomonas_arsenitoxydans 0
Thiomonas_intermedia_K12 0
Rubrivivax_gelatinosus_IL144 0
Leptothrix_cholodnii_SP-6 0
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_phytofirmans_PsJN 0
Burkholderia_phymatum_STM815 0
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 0
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_necator_N-1 0
Ralstonia_eutropha_H16 0
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 0
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Burkholderia_glumae_BGR1 0
Alicycliphilus_denitrificans_K601 0
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 0
Polaromonas_sp._JS666 0
Polaromonas_naphthalenivorans_CJ2 0
Rhodoferax_ferrireducens_T118 0
Acidovorax_ebreus_TPSY 0
Acidovorax_sp._KKS102 0
Acidovorax_sp._JS42 0
Acidovorax_citrulli_AAC00-1 0
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Comamonas_testosteroni_CNB-2 0
Pusillimonas_sp._T7-7 0
Bordetella_petrii_DSM_12804 0
Bordetella_avium_197N 0
Bordetella_pertussis_Tohama_I 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 0
Achromobacter_xylosoxidans 0
Nitrosomonas_sp._Is79A3 0
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 1
Gallionella_capsiferriformans_ES-2 0
Methylovorus_glucosetrophus_SIP3-4 0
Brevundimonas_subvibrioides_ATCC_15264 1
Sphingobium_chlorophenolicum_L-1 0
Hyphomonas_neptunium_ATCC_15444 0
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 1
Tistrella_mobilis_KA081020-065 1
Gluconacetobacter_xylinus_NBRC_3288 0
Gluconobacter_oxydans_621H 0
Acetobacter_pasteurianus_IFO_3283-01 0
Polymorphum_gilvum_SL003B-26A1 0
Xanthobacter_autotrophicus_Py2 0
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 2
Ochrobactrum_anthropi_ATCC_49188 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 0
Mesorhizobium_sp._BNC1 0
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Rhodomicrobium_vannielii_ATCC_17100 0
Hyphomicrobium_sp._MC1 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Oligotropha_carboxidovorans_OM4 0
Nitrobacter_hamburgensis_X14 0
Aliivibrio_salmonicida_LFI1238 1
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 0
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_denitrificans_OS217 0
Shewanella_pealeana_ATCC_700345 1
Shewanella_frigidimarina_NCIMB_400 0
Glaciecola_sp._4H-3-7+YE-5 0
Marinobacter_adhaerens_HP15 0
Marinobacter_sp._BSs20148 0
Marinobacter_aquaeolei_VT8 0
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 1
Rhodanobacter_denitrificans 0
Xanthomonas_albilineans_GPE_PC73 0
Alkalilimnicola_ehrlichii_MLHE-1 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Thioalkalivibrio_sp._K90mix 0
Allochromatium_vinosum_DSM_180 0
Thiocystis_violascens_DSM_198 0
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
Legionella_longbeachae_NSW150 2
gamma_proteobacterium_HdN1 0
Photorhabdus_asymbiotica 1
Yersinia_pseudotuberculosis_IP_31758 0
Dickeya_dadantii_Ech703 1
Dickeya_zeae_Ech1591 1
Erwinia_tasmaniensis_Et1/99 1
Erwinia_amylovora_ATCC_49946 1
Escherichia_blattae_DSM_4481 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Klebsiella_oxytoca_E718 1
Enterobacter_aerogenes_KCTC_2190 1
Escherichia_fergusonii_ATCC_35469 0
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Pseudomonas_entomophila_L48 0
Pseudomonas_protegens_Pf-5 1
Pseudomonas_mendocina_ymp 0
Pseudomonas_aeruginosa_UCBPP-PA14 1
Psychrobacter_sp._G 0
Psychrobacter_sp._PRwf-1 0
Psychrobacter_arcticus_273-4 0
Psychrobacter_cryohalolentis_K5 0
Moraxella_catarrhalis_RH4 0
Acinetobacter_oleivorans_DR1 0
Acinetobacter_calcoaceticus_PHEA-2 0
Acinetobacter_baumannii_ATCC_17978 0
Acinetobacter_sp._ADP1 0
Cenarchaeum_symbiosum_A 1
halophilic_archaeon_DL31 2
Methanosalsum_zhilinae_DSM_4017 1
Methanoculleus_bourgensis_MS2 1
Halorubrum_lacusprofundi_ATCC_49239 1
Haloferax_mediterranei_ATCC_33500 1
Haloferax_volcanii_DS2 1
Haloarcula_marismortui_ATCC_43049 1
Methanocaldococcus_jannaschii_DSM_2661 1
Methanococcus_vannielii_SB 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   17
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   22
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   14
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   11
Cryptococcus_neoformans_var._grubii_H99_ 10
Cryptococcus_neoformans_B-3501A_ 11
Cryptococcus_neoformans_JEC21_ 7
Paracoccidioides_brasiliensis_Pb01_ 10
Paracoccidioides_brasiliensis_Pb03_ 9
Coccidioides_posadasii_str._Silveira_ 11
Coccidioides_immitis_RMSCC_3703_ 6
Coccidioides_immitis_RMSCC_2394_ 10
Coccidioides_immitis_H538.4_ 7
Ajellomyces_dermatitidis_ER-3_ 13
Histoplasma_capsulatum_H143 10
Histoplasma_capsulatum_H88 10
Histoplasma_capsulatum_G186AR 12
Aspergillus_fumigatus_A1163_ 14
Candida_albicans_WO-1_ 8
Saccharomyces_cerevisiae_UC5 2
Saccharomyces_cerevisiae_PW5 3
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 6
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 6
Saccharomyces_cerevisiae_W303 6
Saccharomyces_cerevisiae_JAY291 5
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_CLIB215 2
Saccharomyces_cerevisiae_YJM789_ 5
Saccharomyces_cerevisiae_YJM789 4
Saccharomyces_cerevisiae_RM11-1a 3
Saccharomyces_cerevisiae_RM11-1a_ 3
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   6
Schizosaccharomyces_pombe_972h-_ 2
Batrachochytrium_dendrobatidis_JAM81_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   22
Hordeum_vulgare_22   (Domesticated barley)   15
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   18
Trypanosoma_brucei_Lister_427_v4.1 5
Neospora_caninum_Nc-Liverpool_6.2 12
Plasmodium_falciparum_HB3_ 6
Plasmodium_falciparum_Dd2_ 8
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 1
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._PCC_7002 2
Oscillatoria_nigro-viridis_PCC_7112 2
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._ATCC_51142 2
Cyanothece_sp._PCC_8801 0
Cylindrospermum_stagnale_PCC_7417 2
Anabaena_cylindrica_PCC_7122 0
Ureaplasma_parvum_serovar_3_str._ATCC_700970 1
Mycoplasma_genitalium_M6282 1
Adlercreutzia_equolifaciens_DSM_19450 0
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Propionibacterium_acidipropionici_ATCC_4875 0
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 1
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_sp._KMS 2
Mycobacterium_sp._MCS 1
Corynebacterium_callunae_DSM_20147 0
Bifidobacterium_longum_NCC2705 1
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._longum_F8 1
Bifidobacterium_bifidum_BGN4 0
Thermus_oshimai_JL-2 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 0
Eubacterium_siraeum_V10Sc8a 1
Faecalibacterium_prausnitzii_L2-6 0
Sulfobacillus_acidophilus_TPY 1
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_difficile_R20291 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Roseburia_intestinalis_XB6B4 0
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_pasteurianum_BC1 2
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Thermoanaerobacter_sp._X513 1
Enterococcus_faecium_NRRL_B-2354 1
Enterococcus_faecalis_D32 1
Enterococcus_faecalis_V583 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 0
Streptococcus_intermedius_B196 0
Streptococcus_intermedius_C270 0
Streptococcus_anginosus_C238 0
Streptococcus_equi_subsp._zooepidemicus 0
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 0
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 0
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 0
Streptococcus_parasanguinis_FW213 0
Streptococcus_pyogenes_MGAS10750 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_670-6B 0
Streptococcus_agalactiae_NEM316 0
Streptococcus_agalactiae_2603V/R 0
Streptococcus_thermophilus_JIM_8232 0
Streptococcus_suis_T15 0
Streptococcus_suis_D9 0
Streptococcus_suis_BM407 0
Streptococcus_suis_SC84 0
Streptococcus_suis_GZ1 0
Streptococcus_suis_05ZYH33 0
Geobacillus_sp._Y412MC52 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1
Bacillus_amyloliquefaciens_LFB112 1
Bacillus_amyloliquefaciens_Y2 1
Bacillus_licheniformis_9945A 2
Bacillus_subtilis_PY79 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_thuringiensis_HD-771 2
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2
Bacillus_cereus_FRI-35 1
Bacillus_cereus_AH187 1
Bacillus_cereus_G9842 1
Bacillus_cereus_NC7401 1
Chlorobium_phaeobacteroides_BS1 2
Echinicola_vietnamensis_DSM_17526 0
Emticicia_oligotrophica_DSM_17448 1
Prevotella_sp._oral_taxon_299_str._F0039 0
Porphyromonas_gingivalis_TDC60 0
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 0
Riemerella_anatipestifer_RA-CH-1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1
Campylobacter_jejuni_subsp._jejuni_00-2544 0
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Campylobacter_jejuni_subsp._jejuni_81-176 0
Campylobacter_coli_CVM_N29710 0
Helicobacter_cetorum_MIT_99-5656 0
Helicobacter_pylori_BM012S 0
Helicobacter_pylori_BM012A 0
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_PeCan18 0
Helicobacter_pylori_Shi112 0
Helicobacter_pylori_Shi417 0
Helicobacter_pylori_Aklavik117 0
Helicobacter_pylori_SNT49 0
Helicobacter_pylori_Puno120 0
Helicobacter_pylori_ELS37 0
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_India7 0
Helicobacter_pylori_Lithuania75 0
Helicobacter_pylori_F57 0
Helicobacter_pylori_SJM180 0
Helicobacter_pylori_B8 0
Helicobacter_pylori_83 0
Helicobacter_pylori_P12 0
Helicobacter_pylori_G27 0
Helicobacter_pylori_Shi470 0
Helicobacter_pylori_J99 0
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 1
Sorangium_cellulosum_So0157-2 2
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_phenoliruptrix_BR3459a 0
Pandoraea_pnomenusa_3kgm 0
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_multivorans_ATCC_17616 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Alicycliphilus_denitrificans_BC 0
Variovorax_paradoxus_B4 0
Bordetella_pertussis_CS 0
Bordetella_parapertussis_18323 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 0
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_2.4.1 0
Gluconobacter_oxydans_H24 0
Acetobacter_pasteurianus_386B 0
Acetobacter_pasteurianus_IFO_3283-12 0
Acetobacter_pasteurianus_IFO_3283-01-42C 0
Acetobacter_pasteurianus_IFO_3283-32 0
Acetobacter_pasteurianus_IFO_3283-26 0
Acetobacter_pasteurianus_IFO_3283-22 0
Acetobacter_pasteurianus_IFO_3283-07 0
Acetobacter_pasteurianus_IFO_3283-03 0
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 1
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 0
Rhizobium_tropici_CIAT_899 0
Hyphomicrobium_denitrificans_1NES1 1
Oligotropha_carboxidovorans_OM5 0
Oligotropha_carboxidovorans_OM5 0
Bradyrhizobium_sp._BTAi1 0
Mannheimia_succiniciproducens_MBEL55E 0
Vibrio_nigripulchritudo_VibrioScope 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_OS678 1
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_ATCC_27126 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_oryzae_pv._oryzae_KACC_10331 0
Thioflavicoccus_mobilis_8321 0
Dickeya_dadantii_3937 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Erwinia_amylovora_CFBP1430 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O111:H-_str._11128 0
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1R 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 2
Pseudomonas_aeruginosa_M18 2
Pseudomonas_aeruginosa_LESB58 1
Acinetobacter_genomosp._13TU__RUH2624 0
Acinetobacter_sp.__SH024 0
Acinetobacter_calcoaceticus_ruh2202 0
Acinetobacter_baumannii_ZW85-1 0
Acinetobacter_baumannii_TYTH-1 0
Acinetobacter_baumannii_BJAB0868 0
Acinetobacter_baumannii_BJAB0715 0
Acinetobacter_baumannii_BJAB07104 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_D1279779 0
Acinetobacter_baumannii_MDR-TJ 0
Acinetobacter_baumannii_1656-2 0
Acinetobacter_baumannii__ATCC_19606 0
Acinetobacter_baumannii_AB307-0294 0
Acinetobacter_baumannii_AYE 0
Acinetobacter_baumannii_SDF 0
Acinetobacter_baumannii_MDR-ZJ06 0
Acinetobacter_baumannii_AB0057 0
Acinetobacter_baumannii_ACICU 0
Acinetobacter_radioresistens__SH164 0
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 0
Acinetobacter_lwoffii__SH145 0
Francisella_tularensis_subsp._tularensis_NE061598 1
Francisella_cf._novicida_Fx1 1
Methanomethylovorans_hollandica_DSM_15978 1
Archaeoglobus_sulfaticallidus_PM70-1 1
Natronococcus_occultus_SP4 1
Haloquadratum_walsbyi_C23 1
Halorhabdus_tiamatea_SARL4B 1
Natronomonas_moolapensis_8.8.11 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   21
Pan_troglodytes_69_2.1.4   (Chimpanzee)   18
Gorilla_gorilla_69_3.1   (Western gorilla)   21
Pongo_abelii_69_2   (Sumatran orangutan)   13
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   12
Macaca_mulatta_69_1   (Rhesus monkey)   14
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   19
Otolemur_garnettii_69_3   (Small-eared galago)   16
Microcebus_murinus_69_1   (Gray mouse lemur)   13
Rattus_norvegicus_69_3.4   (Norway rat)   20
Mus_musculus_69_38   (House mouse)   27
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   15
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   17
Cavia_porcellus_69_3   (Domestic guinea pig)   16
Oryctolagus_cuniculus_69_2   (Rabbit)   14
Ochotona_princeps_69   (American pika)   12
Tupaia_belangeri_69   (Northern tree shrew)   6
Sus_scrofa_69_10.2   (Pig)   15
Bos_taurus_69_3.1   (Cattle)   18
Vicugna_pacos_69_1   (Alpaca)   10
Tursiops_truncatus_69_1   (Bottlenose dolphin)   10
Mustela_putorius_furo_69_1.0   (Domestic ferret)   18
Ailuropoda_melanoleuca_69_1   (Giant panda)   18
Canis_familiaris_69_3.1   (Dog)   18
Felis_catus_69   (Domestic cat)   13
Equus_caballus_69_2   (Horse)   17
Myotis_lucifugus_69_2.0   (Little brown bat)   17
Pteropus_vampyrus_69_1   (Large flying fox)   21
Sorex_araneus_69_1   (European shrew)   14
Erinaceus_europaeus_69   (Western European hedgehog)   14
Procavia_capensis_69_1   (Cape rock hyrax)   15
Loxodonta_africana_69_3   (African savanna elephant)   21
Echinops_telfairi_69   (Small Madagascar hedgehog)   11
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   11
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   9
Macropus_eugenii_69_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   16
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   19
Ornithorhynchus_anatinus_69_5   (Platypus)   7
Petromyzon_marinus_69_7.0   (Sea lamprey)   4
Meleagris_gallopavo_69_2   (Turkey)   11
Gallus_gallus_69_2   (Chicken)   15
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   14
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   13
Anolis_carolinensis_69_2.0   (Green anole)   11
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   15
Latimeria_chalumnae_69_1   (Coelacanth)   14
Gadus_morhua_69_1   (Atlantic cod)   14
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   13
Takifugu_rubripes_69_4   (Torafugu)   15
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   15
Oryzias_latipes_69_1   (Japanese medaka)   15
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   14
Oreochromis_niloticus_69_1.0   (Nile tilapia)   15
Danio_rerio_69_9   (Zebrafish)   12
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   3
Ciona_intestinalis_69   (Vase tunicate)   5
Drosophila_melanogaster_69_5   (Fruit fly)   14
Caenorhabditis_elegans_69_215   (Roundworm)   8
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   6
Arabidopsis_thaliana_10   (Thale cress)   18

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   45
Homo_sapiens__(NCBI_version)   (Human)   25
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   27
Loa_loa_v3.3_(Request)   (Eye worm)   6
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   4
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   7
Lotus_japonicus__(Early_assembly) 6
Malus_x_domestica_(Duplicate)   (Apple)   3
Ricinus_communis__(Early_assembly)   (Castor bean)   27
Nicotiana_benthamiana_0.4.4_(Early_draft) 19
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   26
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   27
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
NCBI_plasmid_sequences_(Plasmids) 35
TargetDB__(Targets) 22
Protozoadb_2010_08_(Protozoadb) 187
STRING_v9.0.5_(STRING) 1430
NCBI_viral_sequences_(Viral) 9
Uniprot_2018_03_genome 183807
Protein_Data_Bank_(all_PDB_sequenc) 5
NCBI_2017_08_genome 22431
UniProt__viral_sequences_(Viral) 1

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