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Domain combinations for _gap_,52799,49562,_gap_,46565 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52799 - (Phosphotyrosine protein) phosphatases II
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
46565 - Chaperone J-domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Mus_musculus_76_38   (House mouse)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Ochotona_princeps_76   (American pika)   1
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Canis_familiaris_76_3.1   (Dog)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Gallus_gallus_76_4   (Chicken)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Latimeria_chalumnae_76_1   (Coelacanth)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Poecilia_formosa_76   (Amazon molly)   1
Anopheles_darlingi_22   (American malaria mosquito)   0
Schistosoma_mansoni_ 0

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Strains
Genome     Number
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   1
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Oryzias_latipes_69_1   (Japanese medaka)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
STRING_v9.0.5_(STRING) 8
Uniprot_2018_03_genome 854
NCBI_2017_08_genome 234

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