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Domain combinations for _gap_,54695,48403,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54695 - POZ domain
48403 - Ankyrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Heliconius_melpomene_   (Postman butterfly)   0
Schistosoma_mansoni_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   1
Eucalyptus_grandis_v201   (Rose gum)   5
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3
Gossypium_raimondii_v221 7
Citrus_clementina_v165 6
Citrus_sinensis_v154   (Sweet orange)   7
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   5
Capsella_rubella_v183 4
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   3
Carica_papaya_   (Papaya)   2
Medicago_truncatula_   (Barrel medic)   6
Phaseolus_vulgaris_v186   (French bean)   2
Glycine_max_v109   (Soybean)   6
Cucumis_sativus_v122   (Cucumber)   3
Fragaria_vesca_   (Wild strawberry)   4
Malus_domestica_v196   (Apple)   4
Prunus_persica_v139   (Peach)   4
Linum_usitatissimum_v200   (Flax)   4
Manihot_esculenta_v147   (Cassava)   3
Populus_trichocarpa_v156   (Black cottonwood)   4
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   3
Solanum_lycopersicum_v.2.3   (Tomato)   2
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 4
Aquilegia_coerulea_v195 3
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   4
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   4
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 5
Oryza_glaberrima   (African rice)   4
Oryza_punctata_22 3
Oryza_nivara_22 4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   9
Oryza_sativa_v193   (Rice)   9
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   4
Panicum_virgatum_v202   (Switchgrass)   4
Setaria_italica_v164   (Foxtail millet)   5
Zea_mays_subsp._mays_   (Maize)   3
Zea_mays_v181   (Maize)   3
Sorghum_bicolor_   (Sorghum)   3
Musa_balbisiana   (Balbis banana)   11
Musa_acuminata_22   (Wild Malaysian banana)   8
Amborella_trichopoda_22 2
Symbiodinium_minutum_clade_B1_v1.2 0
Guillardia_theta_CCMP2712_v1.0_ 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   5

Longest transcript per gene
Genome     Number
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Arabidopsis_thaliana_10   (Thale cress)   3

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   4
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 5
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2
STRING_v9.0.5_(STRING) 31
NCBI_2017_08_genome 389
Uniprot_2018_03_genome 3780

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