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Domain combinations for _gap_,55021,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55021 - ACT-like
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Selaginella_moellendorffii_ 4
Eucalyptus_grandis_v201   (Rose gum)   11
Theobroma_cacao_B97-61/B2_v1   (Cacao)   4
Gossypium_raimondii_v221 29
Citrus_clementina_v165 9
Citrus_sinensis_v154   (Sweet orange)   9
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   6
Capsella_rubella_v183 3
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   3
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   9
Phaseolus_vulgaris_v186   (French bean)   7
Glycine_max_v109   (Soybean)   10
Cucumis_sativus_v122   (Cucumber)   17
Fragaria_vesca_   (Wild strawberry)   4
Malus_domestica_v196   (Apple)   3
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   6
Manihot_esculenta_v147   (Cassava)   4
Populus_trichocarpa_v156   (Black cottonwood)   10
Vitis_vinifera_   (Wine grape)   3
Mimulus_guttatus_v140   (Spotted monkey flower)   4
Solanum_lycopersicum_v.2.3   (Tomato)   5
Solanum_tuberosum_   (Potato)   2
Actinidia_chinensis_Hongyang_ 2
Aquilegia_coerulea_v195 7
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   6
Aegilops_tauschii_22 3
Brachypodium_distachyon_   (Stiff brome)   11
Oryza_barthii_22   (African wild rice)   9
Oryza_meridionalis_22 11
Oryza_glumaepatula_22 6
Oryza_glaberrima   (African rice)   6
Oryza_punctata_22 9
Oryza_nivara_22 8
Oryza_brachyantha_22   (Malo sina)   6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   12
Oryza_sativa_v193   (Rice)   12
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   3
Panicum_virgatum_v202   (Switchgrass)   10
Setaria_italica_v164   (Foxtail millet)   13
Zea_mays_subsp._mays_   (Maize)   10
Zea_mays_v181   (Maize)   15
Sorghum_bicolor_   (Sorghum)   6
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   6
Amborella_trichopoda_22 2
Physcomitrella_patens 7
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 1
Bathycoccus_prasinos_ 1
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4
Hordeum_vulgare_22   (Domesticated barley)   6
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   3

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   3
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 9
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   5
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   5
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 53
NCBI_2017_08_genome 770
Uniprot_2018_03_genome 4686

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