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Domain combinations for _gap_,55248,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55248 - PCD-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Drosophila_suzukii 1
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 1
Hydnomerulius_pinastri_v2.0 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 1
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Pleurotus_ostreatus_   (Oyster mushroom)   1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1
Schizophyllum_commune_ 0
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 1
Daldinia_eschscholzii_EC12_v1.0 1
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 1
Sporotrichum_thermophile_ATCC_42464_ 1
Verticillium_dahliae_VdLs.17_ 1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_niger_22 2
Aspergillus_flavus_NRRL3357_ 1
Selaginella_moellendorffii_ 1
Actinidia_chinensis_Hongyang_ 1
Triticum_aestivum_22   (Bread wheat)   1
Physcomitrella_patens 0
Micromonas_pusilla_CCMP1545_v3.0 1
Leishmania_mexicana_2.4 1
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 1
Phaeodactylum_tricornutumCCAP_1055/1 0
Paramecium_tetraurelia_ 15
Tetrahymena_thermophila_SB210_1_ 1

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Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Trypanosoma_brucei_Lister_427_v4.1 1

Others
Genome     Number
TargetDB__(Targets) 3
Protozoadb_2010_08_(Protozoadb) 7
STRING_v9.0.5_(STRING) 9
NCBI_2017_08_genome 92
Uniprot_2018_03_genome 1080

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