SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,55729,55718 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55729 - Acyl-CoA N-acyltransferases (Nat)
55718 - SCP-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Acaryochloris_marina_MBIC11017 1
Microcoleus_sp._PCC_7113 1
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 1
Rivularia_sp._PCC_7116 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Ilumatobacter_coccineus 1
Catenulispora_acidiphila_DSM_44928 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Streptomyces_coelicolor_A3(2) 2
Amycolatopsis_mediterranei_U32 1
Actinoplanes_sp._N902-109 1
Tsukamurella_paurometabola_DSM_20162 2
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 1
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 1
Rhodococcus_erythropolis_PR4 1
Nocardia_cyriacigeorgica_GUH-2 1
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_avium_104 2
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_smegmatis_str._MC2_155 1
Microbacterium_testaceum_StLB037 1
Roseiflexus_castenholzii_DSM_13941 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfitobacterium_hafniense_Y51 1
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 1
Eubacterium_eligens_ATCC_27750 1
[Ruminococcus]_obeum 1
Eubacterium_rectale_M104/1 1
Eubacterium_rectale_ATCC_33656 1
Clostridium_kluyveri_DSM_555 1
Clostridium_beijerinckii_NCIMB_8052 1
Melissococcus_plutonius_DAT561 1
Enterococcus_sp._7L76 1
Enterococcus_hirae_ATCC_9790 1
Enterococcus_faecium_Aus0004 1
Enterococcus_faecalis_62 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_rhamnosus_Lc_705 1
Lactobacillus_sakei_subsp._sakei_23K 1
Lysinibacillus_sphaericus_C3-41 1
Bacillus_clausii_KSM-K16 1
Brachyspira_murdochii_DSM_12563 1
Brachyspira_intermedia_PWS/A 1
Brachyspira_pilosicoli_95/1000 1
Brachyspira_hyodysenteriae_WA1 1
Helicobacter_cinaedi_PAGU611 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Agrobacterium_radiobacter_K84 1
Mesorhizobium_opportunistum_WSM2075 1
Haloferax_mediterranei_ATCC_33500 1
Haloferax_volcanii_DS2 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Chroococcidiopsis_thermalis_PCC_7203 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._PCC_8801 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Frankia_sp._EuI1c 1
Streptomyces_albus_J1074 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 2
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_sp._MOTT36Y 1
Mycobacterium_sp._JDM601 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 1
Mycobacterium_intracellulare_MOTT-64 1
Mycobacterium_indicus_pranii_MTCC_9506 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 2
Mycobacterium_avium_subsp._paratuberculosis_K-10 2
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 1
Erysipelothrix_rhusiopathiae_SY1027 1
Desulfitobacterium_hafniense_DCB-2 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_kluyveri_NBRC_12016 1
Clostridium_botulinum_E3_str._Alaska_E43 1
Carnobacterium_maltaromaticum_LMA28 1
Melissococcus_plutonius_ATCC_35311 1
Enterococcus_mundtii_QU_25 1
Enterococcus_casseliflavus_EC20 1
Enterococcus_faecium_Aus0085 1
Enterococcus_faecium_NRRL_B-2354 1
Enterococcus_faecium_DO 1
Enterococcus_faecalis_str._Symbioflor_1 1
Enterococcus_faecalis_D32 1
Enterococcus_faecalis_OG1RF 2
Enterococcus_faecalis_V583 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_rhamnosus_LOCK908 1
Lactobacillus_rhamnosus_LOCK900 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_rhamnosus_GG 1
Lactobacillus_rhamnosus_GG 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1
Bacillus_amyloliquefaciens_XH7 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_amyloliquefaciens_TA208 1
Bacillus_amyloliquefaciens_DSM_7 1
Brachyspira_pilosicoli_WesB 1
Brachyspira_pilosicoli_B2904 1
Brachyspira_pilosicoli_P43/6/78 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
NCBI_plasmid_sequences_(Plasmids) 4
STRING_v9.0.5_(STRING) 53
Uniprot_2018_03_genome 8508
NCBI_2017_08_genome 10620
PDB_chains_(SCOP_1.75)_(PDB) 3
TargetDB__(Targets) 6
Protein_Data_Bank_(all_PDB_sequenc) 42

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]