SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,55785,_gap_,55785,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain)
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Citrus_sinensis_v154   (Sweet orange)   1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   3
Linum_usitatissimum_v200   (Flax)   2
Populus_trichocarpa_v156   (Black cottonwood)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 1
Oryza_barthii_22   (African wild rice)   2
Oryza_nivara_22 2

Strains
Genome     Number
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 0
NCBI_2017_08_genome 12
Uniprot_2018_03_genome 240

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]