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Domain combinations for _gap_,56091,50249,52113,_gap_,52113 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins
52113 - BRCT domain
52113 - BRCT domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Vicugna_pacos_76_1   (Alpaca)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Drosophila_persimilis_1.3 1
Daphnia_pulex_   (Common water flea)   1
Sphaeroforma_arctica_JP610_ 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Glomerella_graminicola_22 1
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 1
Candida_lusitaniae_ATCC_42720_ 1
Saccharomyces_mikatae_MIT 1
Schizosaccharomyces_cryophilus_OY26_22 1
Bigelowiella_natans_CCMP2755_22 1
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_ultimum_v1.7-2 1

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Strains
Genome     Number
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1

Longest transcript per gene
Genome     Number
Vicugna_pacos_69_1   (Alpaca)   1

Others
Genome     Number
NCBI_2017_08_genome 68
Uniprot_2018_03_genome 2356
STRING_v9.0.5_(STRING) 2

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