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Domain combinations for _gap_,56112,48452 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mnemiopsis_leidyi   (Sea walnut)   1
Capsaspora_owczarzaki_ATCC_30864_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 5
Stagonospora_nodorum_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_flavus_NRRL3357_ 1
Allomyces_macrogynus_ATCC_38327_ 1
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 2
Thellungiella_halophila_v173 2
Capsella_rubella_v183 4
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   1
Fragaria_vesca_   (Wild strawberry)   3
Malus_domestica_v196   (Apple)   4
Linum_usitatissimum_v200   (Flax)   1
Populus_trichocarpa_v156   (Black cottonwood)   2
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Actinidia_chinensis_Hongyang_ 2
Triticum_aestivum_22   (Bread wheat)   2
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 2
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   1
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   3
Cyanophora_paradoxa_ 1
Ectocarpus_siliculosus 1
Aureococcus_anophagefferens_ 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 6
Ichthyophthirius_multifiliis_strain_G5_ 0
Naegleria_gruberi_ 1
Leptolyngbya_sp._PCC_7376 1
Microcystis_aeruginosa_NIES-843 1
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 1
Anabaena_sp._90 0
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 2
Frankia_alni_ACN14a 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Amycolatopsis_mediterranei_U32 2
Kribbella_flavida_DSM_17836 1
Microlunatus_phosphovorus_NM-1 1
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 1
Segniliparus_rotundus_DSM_44985 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 0
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_erythropolis_PR4 1
Nocardia_farcinica_IFM_10152 1
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_avium_104 1
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_ulcerans_Agy99 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 1
Corynebacterium_resistens_DSM_45100 0
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_kroppenstedtii_DSM_44385 0
Corynebacterium_efficiens_YS-314 0
Corynebacterium_jeikeium_K411 0
Intrasporangium_calvum_DSM_43043 1
Cellulomonas_flavigena_DSM_20109 1
[Cellvibrio]_gilvus_ATCC_13127 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 1
Clostridium_cellulovorans_743B 1
Clostridium_acetobutylicum_ATCC_824 1
Gemmatimonas_aurantiaca_T-27 1
Flexibacter_litoralis_DSM_6794 0
Marivirga_tractuosa_DSM_4126 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 0
Chlamydophila_caviae_GPIC 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 1
Rhodopirellula_baltica_SH_1 0
Opitutus_terrae_PB90-1 1
Akkermansia_muciniphila_ATCC_BAA-835 0
Candidatus_Chloracidobacterium_thermophilum_B 2
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 0
Desulfomonile_tiedjei_DSM_6799 0
Desulfatibacillum_alkenivorans_AK-01 1
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 5
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Hyphomonas_neptunium_ATCC_15444 0
Cellvibrio_japonicus_Ueda107 1
Pseudoalteromonas_atlantica_T6c 0
Methylomicrobium_alcaliphilum 1
Frateuria_aurantia_DSM_6220 0
Pseudoxanthomonas_spadix_BD-a59 0
Pseudoxanthomonas_suwonensis_11-1 0
Methanocella_conradii_HZ254 0
Methanocella_paludicola_SANAE 0

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Chroococcidiopsis_thermalis_PCC_7203 1
Chamaesiphon_minutus_PCC_6605 1
Dactylococcopsis_salina_PCC_8305 0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Cylindrospermum_stagnale_PCC_7417 1
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_orientalis_HCCB10007 2
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_sp._MOTT36Y 1
Mycobacterium_sp._JDM601 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 1
Mycobacterium_intracellulare_MOTT-64 1
Mycobacterium_indicus_pranii_MTCC_9506 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_kansasii_ATCC_12478 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 0
Corynebacterium_glutamicum_MB001 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_diphtheriae_VA01 0
Corynebacterium_diphtheriae_HC04 0
Corynebacterium_diphtheriae_HC01 0
Corynebacterium_diphtheriae_241 0
Clostridium_acetobutylicum_DSM_1731 1
Singulisphaera_acidiphila_DSM_18658 0
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1

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Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   4
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
NCBI_plasmid_sequences_(Plasmids) 1
Protein_Data_Bank_(all_PDB_sequenc) 2
TargetDB__(Targets) 6
STRING_v9.0.5_(STRING) 56
Uniprot_2018_03_genome 8430
NCBI_2017_08_genome 9045

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