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Domain combinations for _gap_,56672,_gap_,53098,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56672 - DNA/RNA polymerases
53098 - Ribonuclease H-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   50
Bombyx_mori_   (Domestic silkworm)   1
Nasonia_vitripennis_   (Jewel wasp)   6
Linepithema_humile_v1.1   (Argentine ant)   1
Tribolium_castaneum_3.0   (Red flour beetle)   2
Acyrthosiphon_pisum_   (Pea aphid)   3
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 3
Caenorhabditis_japonica_ 7
Caenorhabditis_brenneri_ 13
Caenorhabditis_remanei_ 31
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 5
Mnemiopsis_leidyi   (Sea walnut)   1
Hydra_vulgaris 1
Amphimedon_queenslandica 3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   4
Oryza_sativa_v193   (Rice)   4
Phytophthora_sojae_1.1 1
Perkinsus_marinus_ATCC_50983_ 23
Toxoplasma_gondii_ME49 1
Symbiodinium_minutum_clade_B1_v1.2 2

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2

Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Danio_rerio_69_9   (Zebrafish)   1

Others
Genome     Number
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   6
Protozoadb_2010_08_(Protozoadb) 2
STRING_v9.0.5_(STRING) 63
NCBI_2017_08_genome 756
Uniprot_2018_03_genome 9009

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