SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,57184,57196,57196,_gap_,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57184 - Growth factor receptor domain
57196 - EGF/Laminin
57196 - EGF/Laminin
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Sus_scrofa_76_10.2   (Pig)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   1

Longest transcript per gene
Genome     Number
Sus_scrofa_69_10.2   (Pig)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 190
NCBI_2017_08_genome 13

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]