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Domain combinations for _gap_,57603,54001 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57603 - FnI-like domain
54001 - Cysteine proteinases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1

Longest transcript per gene
Genome     Number
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Bos_taurus_69_3.1   (Cattle)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 234
NCBI_2017_08_genome 100

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