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Domain combinations for _gap_,57756,_gap_,56672 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57756 - Retrovirus zinc finger-like domains
56672 - DNA/RNA polymerases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Saccoglossus_kowalevskii_v3.0 2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Nasonia_vitripennis_   (Jewel wasp)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Acyrthosiphon_pisum_   (Pea aphid)   1
Strigamia_maritima_22 1
Meloidogyne_incognita_   (Southern root-knot nematode)   6
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 4
Trichinella_spiralis_22 1
Mnemiopsis_leidyi   (Sea walnut)   0
Acropora_digitifera_v1.0 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Phanerochaete_chrysosporium_RP-78_2.1 0
Chaetomium_globosum_CBS_148.51_ 1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   20
Thellungiella_halophila_v173 3
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   2
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   6
Populus_trichocarpa_v156   (Black cottonwood)   2
Solanum_lycopersicum_v.2.3   (Tomato)   3
Brachypodium_distachyon_   (Stiff brome)   2
Oryza_brachyantha_22   (Malo sina)   2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   18
Oryza_sativa_v193   (Rice)   18
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Musa_balbisiana   (Balbis banana)   5
Phytophthora_ramorum_1.1   (Sudden oak death agent)   8
Phytophthora_sojae_1.1 14
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 1
Perkinsus_marinus_ATCC_50983_ 3
Symbiodinium_minutum_clade_B1_v1.2 6

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Strains
Genome     Number
Batrachochytrium_dendrobatidis_JEL423_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   9
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4

Others
Genome     Number
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Moniliophthora_perniciosa_FA553__(Genome_survey) 1
Malus_x_domestica_(Duplicate)   (Apple)   0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3
STRING_v9.0.5_(STRING) 62
UniProt__viral_sequences_(Viral) 2
NCBI_2017_08_genome 332
Uniprot_2018_03_genome 2790
NCBI_viral_sequences_(Viral) 4

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