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Domain combinations for _gap_,57903,_gap_,48371,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57903 - FYVE/PHD zinc finger
48371 - ARM repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Sphaeroforma_arctica_JP610_ 1
Dictyostelium_discoideum 1
Selaginella_moellendorffii_ 1
Eucalyptus_grandis_v201   (Rose gum)   2
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   1
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   2
Phaseolus_vulgaris_v186   (French bean)   2
Glycine_max_v109   (Soybean)   1
Cucumis_sativus_v122   (Cucumber)   1
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   2
Linum_usitatissimum_v200   (Flax)   1
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Aquilegia_coerulea_v195 1
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 1
Oryza_punctata_22 1
Oryza_nivara_22 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Musa_balbisiana   (Balbis banana)   0
Amborella_trichopoda_22 1
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 0
Ectocarpus_siliculosus 1
Phytophthora_infestans_T30-4_ 0
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 1
Thalassiosira_pseudonana_CCMP1335 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
STRING_v9.0.5_(STRING) 8
NCBI_2017_08_genome 121
Uniprot_2018_03_genome 1443

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