SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57959,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57959 - Leucine zipper domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   53
Pan_troglodytes_76_2.1.4   (Chimpanzee)   15
Gorilla_gorilla_76_3.1   (Western gorilla)   20
Pongo_abelii_76_2   (Sumatran orangutan)   17
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   19
Papio_anubis_76   (Olive baboon)   20
Macaca_mulatta_76_1   (Rhesus monkey)   17
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   32
Otolemur_garnettii_76_3   (Small-eared galago)   13
Microcebus_murinus_76_1   (Gray mouse lemur)   11
Rattus_norvegicus_76_5.0   (Norway rat)   16
Mus_musculus_76_38   (House mouse)   25
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   11
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   15
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   16
Cavia_porcellus_76_3   (Domestic guinea pig)   17
Oryctolagus_cuniculus_76_2   (Rabbit)   15
Ochotona_princeps_76   (American pika)   9
Tupaia_belangeri_76   (Northern tree shrew)   9
Sus_scrofa_76_10.2   (Pig)   16
Bos_taurus_76_3.1   (Cattle)   19
Ovis_aries_76_3.1   (Sheep)   20
Vicugna_pacos_76_1   (Alpaca)   9
Tursiops_truncatus_76_1   (Bottlenose dolphin)   12
Mustela_putorius_furo_76_1.0   (Domestic ferret)   18
Ailuropoda_melanoleuca_76_1   (Giant panda)   17
Canis_familiaris_76_3.1   (Dog)   22
Felis_catus_76_6.2   (Domestic cat)   15
Equus_caballus_76_2   (Horse)   14
Myotis_lucifugus_76_2.0   (Little brown bat)   16
Pteropus_vampyrus_76_1   (Large flying fox)   14
Sorex_araneus_76_1   (European shrew)   4
Erinaceus_europaeus_76   (Western European hedgehog)   6
Procavia_capensis_76_1   (Cape rock hyrax)   13
Loxodonta_africana_76_3   (African savanna elephant)   16
Echinops_telfairi_76   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   23
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8
Macropus_eugenii_76_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   19
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   16
Ornithorhynchus_anatinus_76_5   (Platypus)   10
Saccoglossus_kowalevskii_v3.0 28
Petromyzon_marinus_76_7.0   (Sea lamprey)   7
Meleagris_gallopavo_76_2   (Turkey)   10
Gallus_gallus_76_4   (Chicken)   11
Anas_platyrhynchos_76_1.0   (Mallard)   9
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   10
Ficedula_albicollis_76_1.0   (Collared flycatcher)   13
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   12
Anolis_carolinensis_76_2.0   (Green anole)   11
Xenopus_laevis_   (African clawed frog)   26
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   18
Latimeria_chalumnae_76_1   (Coelacanth)   18
Lepisosteus_oculatus_76   (Spotted gar)   14
Gadus_morhua_76_1   (Atlantic cod)   17
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   26
Takifugu_rubripes_76_4   (Torafugu)   53
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   23
Oryzias_latipes_76_1   (Japanese medaka)   20
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   24
Poecilia_formosa_76   (Amazon molly)   26
Oreochromis_niloticus_76_1.0   (Nile tilapia)   36
Astyanax_mexicanus_76   (Mexican tetra)   25
Danio_rerio_76_9   (Zebrafish)   33
Oikopleura_dioica 15
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   9
Ciona_intestinalis_76   (Vase tunicate)   10
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   7
Adineta_vaga 23
Octopus_bimaculoides_280 12
Crassostrea_gigas_22   (Pacific oyster)   13
Lottia_gigantea_   (Owl limpet)   7
Helobdella_robusta_ 9
Capitella_sp._I_ 10
Danaus_plexippus_OGS1.0   (Monarch butterfly)   7
Heliconius_melpomene_   (Postman butterfly)   6
Bombyx_mori_   (Domestic silkworm)   6
Nasonia_vitripennis_   (Jewel wasp)   5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   7
Linepithema_humile_v1.1   (Argentine ant)   7
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   8
Solenopsis_invicta_v.2.2.3   (Red fire ant)   6
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   9
Atta_cephalotes_v1.1 7
Camponotus_floridanus_v3.3   (Florida carpenter ant)   8
Lucilia_cuprina   (Australian sheep blowfly)   6
Drosophila_grimshawi_1.3 5
Drosophila_willistoni_1.3 5
Drosophila_pseudoobscura_2.13 5
Drosophila_persimilis_1.3 5
Drosophila_suzukii 5
Drosophila_yakuba_1.3 4
Drosophila_simulans_1.3 5
Drosophila_sechellia_1.3 6
Drosophila_melanogaster_76_5   (Fruit fly)   15
Drosophila_erecta_1.3 5
Drosophila_ananassae_1.3 5
Drosophila_virilis_1.2 5
Drosophila_mojavensis_1.3 5
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   9
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   9
Anopheles_darlingi_22   (American malaria mosquito)   7
Anopheles_gambiae_49_3j   (African malaria mosquito)   6
Tribolium_castaneum_3.0   (Red flour beetle)   8
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   8
Acyrthosiphon_pisum_   (Pea aphid)   5
Rhodnius_prolixus_22 5
Daphnia_pulex_   (Common water flea)   9
Strigamia_maritima_22 9
Sarcoptes_scabiei 5
Tetranychus_urticae_   (Two-spotted spider mite)   9
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   5
Pristionchus_pacificus_ 7
Meloidogyne_incognita_   (Southern root-knot nematode)   5
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   13
Caenorhabditis_japonica_ 8
Caenorhabditis_brenneri_ 10
Caenorhabditis_remanei_ 11
Caenorhabditis_elegans_76_235   (Roundworm)   18
Caenorhabditis_briggsae_2 10
Trichinella_spiralis_22 3
Hymenolepis_microstoma_ 11
Echinococcus_multilocularis_ 12
Echinococcus_granulosus_ 12
Taenia_solium_   (Pork tapeworm)   10
Schistosoma_mansoni_ 9
Mnemiopsis_leidyi   (Sea walnut)   8
Thelohanellus_kitauei 2
Acropora_digitifera_v1.0 5
Nematostella_vectensis_1.0   (Starlet sea anemone)   10
Hydra_vulgaris 5
Amphimedon_queenslandica 7
Trichoplax_adhaerens_ 4
Proterospongia_sp._ATCC_50818_ 10
Monosiga_brevicollis_ 9
Sphaeroforma_arctica_JP610_ 8
Capsaspora_owczarzaki_ATCC_30864_ 9
Conidiobolus_coronatus_NRRL28638_v1.0 9
Mortierella_verticillata_NRRL_6337_ 22
Phycomyces_blakesleeanus_ 25
Rhizopus_oryzae_RA_99-880_ 35
Mucor_circinelloides_ 32
Rhizomucor_miehei_CAU432_ 31
Malassezia_globosa_CBS_7966_ 14
Sporisorium_reilianum_22 10
Ustilago_maydis_ 9
Mixia_osmundae_IAM_14324_v1.0 6
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 10
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 10
Melampsora_laricis-populina_ 10
Rhodotorula_graminis_WP1_v1.0 9
Sporobolomyces_roseus_IAM_13481_ 4
Microbotryum_violaceum_22 12
Wallemia_sebi_v1.0 3
Sphaerobolus_stellatus_v1.0 8
Piloderma_croceum_F_1598_v1.0 8
Serpula_lacrymans_var._lacrymans_S7.9_ 6
Coniophora_puteana 7
Hydnomerulius_pinastri_v2.0 7
Paxillus_rubicundulus_Ve08.2h10_v1.0 8
Pisolithus_microcarpus_441_v1.0 6
Pisolithus_tinctorius_Marx_270_v1.0 5
Scleroderma_citrinum_Foug_A_v1.0 7
Coprinopsis_cinerea_okayama7_130_v3 8
Pleurotus_ostreatus_   (Oyster mushroom)   8
Amanita_thiersii_Skay4041_v1.0 7
Amanita_muscaria_Koide_v1.0   (Fly agaric)   9
Galerina_marginata_v1.0 9
Hebeloma_cylindrosporum_h7_v2.0 8
Laccaria_bicolor_S238N-H82_ 7
Agaricus_bisporus_var._bisporus_ 6
Schizophyllum_commune_ 6
Stereum_hirsutum_FP-91666_SS1__v1.0 6
Heterobasidion_annosum_ 8
Gloeophyllum_trabeumv1.0 7
Punctularia_strigosozonata_v1.0 6
Sebacina_vermifera_MAFF_305830_v1.0 8
Fomitiporia_mediterranea_v1.0 8
Tulasnella_calospora_AL13/4D_v1.0 5
Postia_placenta_ 10
Wolfiporia_cocos_MD-104_SS10__v1.0 7
Fomitopsis_pinicolav1.0 7
Fomitopsis_pinicola_FP-58527_SS1_v3.0 7
Phanerochaete_chrysosporium_RP-78_2.1 6
Dichomitus_squalens 6
Trametes_versicolor_v1.0 8
Tremella_mesenterica_   (Witches' butter)   9
Daldinia_eschscholzii_EC12_v1.0 13
Apiospora_montagnei_NRRL_25634_v1.0 17
Magnaporthe_poae_ATCC_64411_22 16
Magnaporthe_grisea_70-15_ 17
Podospora_anserina_ 17
Sporotrichum_thermophile_ATCC_42464_ 15
Thielavia_terrestris_NRRL_8126_ 14
Chaetomium_globosum_CBS_148.51_ 10
Neurospora_tetrasperma_ 14
Neurospora_discreta_FGSC_8579_ 14
Neurospora_crassa_OR74A_ 16
Cryphonectria_parasitica_   (Chestnut blight fungus)   16
Verticillium_albo-atrum_VaMs.102_ 11
Verticillium_dahliae_VdLs.17_ 19
Acremonium_alcalophilumv_1.0 16
Glomerella_graminicola_22 18
Fusarium_graminearum_ 20
Nectria_haematococca_mpVI_ 15
Fusarium_oxysporum_f._sp._lycopersici_4286_ 59
Fusarium_verticillioides_7600_ 15
Trichoderma_asperellum_CBS_433.97_v1.0 19
Trichoderma_atroviride_ 18
Trichoderma_citrinoviride_v1.0 19
Trichoderma_reesei_1.2 16
Trichoderma_virens_Gv29-8_ 16
Trichoderma_longibrachiatum_ATCC_18648_v1.0 13
Trichoderma_harzianum_CBS_226.95_v1.0 18
Amorphotheca_resinae_v1.0   (Creosote fungus)   15
Botrytis_cinerea_B05.10_ 11
Sclerotinia_sclerotiorum_ 14
Blumeria_graminis_22 9
Didymella_exigua_CBS_183.55_v1.0 16
Leptosphaeria_maculans_22 11
Setosphaeria_turcica_v1.0 16
Cochliobolus_miyabeanus_ATCC_44560_v1.0 15
Cochliobolus_victoriae_FI3_v1.0 16
Cochliobolus_carbonum_26-R-13_v1.0 16
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   13
Alternaria_brassicicola_ 15
Cochliobolus_lunatus_m118_v2.0 14
Pyrenophora_teres_f._teres_22 16
Pyrenophora_tritici-repentis_ 14
Stagonospora_nodorum_ 15
Mycosphaerella_graminicola_IPO323_ 9
Zasmidium_cellare_ATCC_36951_v1.0 29
Dothistroma_septosporum 12
Septoria_musiva_v1.0 15
Mycosphaerella_fijiensis_CIRAD86_ 9
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 14
Paracoccidioides_brasiliensis_Pb18_ 12
Coccidioides_posadasii_RMSCC_3488_ 11
Coccidioides_immitis_RS_ 15
Ajellomyces_dermatitidis_SLH14081_ 14
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 10
Microsporum_canis_CBS_113480_ 13
Trichophyton_equinum_CBS_127.97_ 13
Trichophyton_verrucosum_HKI_0517_ 11
Arthroderma_benhamiae_CBS_112371_ 9
Trichophyton_tonsurans_CBS_112818_ 11
Trichophyton_rubrum_CBS_118892_ 14
Uncinocarpus_reesii_1704_ 13
Aspergillus_zonatus_v1.0 14
Penicillium_chrysogenum_Wisconsin_54-1255_ 21
Penicillium_chrysogenum_v1.0 15
Aspergillus_acidus_v1.0 19
Aspergillus_fumigatus_Af293 15
Aspergillus_brasiliensis_v1.0 19
Aspergillus_nidulans_FGSC_A4_ 17
Aspergillus_sydowii_v1.0 20
Aspergillus_versicolor_v1.0 22
Aspergillus_glaucus 17
Aspergillus_carbonarius_ITEM_5010_ 16
Neosartorya_fischeri_NRRL_181_ 21
Aspergillus_terreus_NIH2624_ 14
Aspergillus_tubingensis_v1.0 15
Aspergillus_wentii_v1.0 16
Aspergillus_oryzae_RIB40_ 14
Aspergillus_niger_22 17
Aspergillus_niger_ATCC_1015_ 11
Aspergillus_flavus_NRRL3357_ 18
Aspergillus_clavatus_NRRL_1_ 21
Penicillium_marneffei_ATCC_18224_ 17
Tuber_melanosporum_Mel28_22 12
Tuber_melanosporum_Vittad_   (Perigord truffle)   28
Hansenula_polymorpha_v2.0 4
Dekkera_bruxellensis_CBS_2499_v2.0 4
Pichia_membranifaciensv1.0 7
Candida_tanzawaensis_NRRL_Y-17324__v1.0 4
Candida_dubliniensis_CD36_ 4
Candida_tropicalis_MYA-3404_ 5
Candida_parapsilosis_ 4
Candida_albicans_SC5314 4
Lodderomyces_elongisporus_NRRL_YB-4239_ 5
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5
Pichia_stipitis_CBS_6054_ 3
Candida_guilliermondii_ATCC_6260_ 4
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 5
Wickerhamomyces_anomalus 5
Pichia_pastoris_GS115_ 8
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2
Yarrowia_lipolytica_CLIB122 6
Candida_lusitaniae_ATCC_42720_ 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 5
Vanderwaltozyma_polyspora_DSM_70294_ 5
Candida_glabrata_CBS138 8
Kluyveromyces_thermotolerans_CBS_6340 4
Lachancea_kluyveri_ 4
Kluyveromyces_waltii 4
Ashbya_gossypii_ATCC_10895_ 4
Zygosaccharomyces_rouxii_ 4
Saccharomyces_mikatae_MIT 8
Saccharomyces_paradoxus_MIT 9
Saccharomyces_cerevisiae_76   (Baker's yeast)   8
Saccharomyces_bayanus_MIT 8
Kluyveromyces_lactis 5
Schizosaccharomyces_cryophilus_OY26_22 2
Schizosaccharomyces_octosporus_yFS286_ 2
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 9
Allomyces_macrogynus_ATCC_38327_ 25
Spizellomyces_punctatus_DAOM_BR117_ 16
Dictyostelium_discoideum 19
Dictyostelium_purpureum_ 10
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 16
Pinus_taeda   (Loblolly pine)   18
Picea_abies   (Norway spruce)   28
Eucalyptus_grandis_v201   (Rose gum)   53
Theobroma_cacao_B97-61/B2_v1   (Cacao)   39
Gossypium_raimondii_v221 185
Citrus_clementina_v165 69
Citrus_sinensis_v154   (Sweet orange)   64
Thellungiella_halophila_v173 58
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   86
Capsella_rubella_v183 61
Arabidopsis_lyrata_   (Lyrate rockcress)   52
Arabidopsis_thaliana_10   (Thale cress)   90
Carica_papaya_   (Papaya)   27
Medicago_truncatula_   (Barrel medic)   70
Phaseolus_vulgaris_v186   (French bean)   61
Glycine_max_v109   (Soybean)   108
Cucumis_sativus_v122   (Cucumber)   79
Fragaria_vesca_   (Wild strawberry)   33
Malus_domestica_v196   (Apple)   74
Prunus_persica_v139   (Peach)   30
Linum_usitatissimum_v200   (Flax)   81
Manihot_esculenta_v147   (Cassava)   55
Populus_trichocarpa_v156   (Black cottonwood)   61
Vitis_vinifera_   (Wine grape)   27
Mimulus_guttatus_v140   (Spotted monkey flower)   33
Solanum_lycopersicum_v.2.3   (Tomato)   44
Solanum_tuberosum_   (Potato)   57
Actinidia_chinensis_Hongyang_ 48
Aquilegia_coerulea_v195 60
Triticum_urartu_22 42
Triticum_aestivum_22   (Bread wheat)   92
Aegilops_tauschii_22 39
Brachypodium_distachyon_   (Stiff brome)   63
Oryza_barthii_22   (African wild rice)   81
Oryza_meridionalis_22 76
Oryza_glumaepatula_22 81
Oryza_glaberrima   (African rice)   49
Oryza_punctata_22 92
Oryza_nivara_22 96
Oryza_brachyantha_22   (Malo sina)   57
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   94
Oryza_sativa_v193   (Rice)   94
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   72
Panicum_virgatum_v202   (Switchgrass)   114
Setaria_italica_v164   (Foxtail millet)   76
Zea_mays_subsp._mays_   (Maize)   128
Zea_mays_v181   (Maize)   143
Sorghum_bicolor_   (Sorghum)   57
Musa_balbisiana   (Balbis banana)   68
Musa_acuminata_22   (Wild Malaysian banana)   79
Amborella_trichopoda_22 21
Physcomitrella_patens 23
Coccomyxa_subellipsoidea_sp._C-169_v2 21
Asterochloris_sp._Cgr/DA1pho_v1.0 5
Chlorella_variabilis_sp._NC64A_ 11
Chlorella_vulgaris_ 21
Volvox_carteri_f._nagariensis_ 17
Volvox_carteri_v199 14
Chlamydomonas_reinhardtii_4.0 10
Ostreococcus_sp._RCC809_ 3
Ostreococcus_lucimarinus_CCE9901_ 3
Ostreococcus_tauri_ 3
Bathycoccus_prasinos_ 3
Micromonas_sp._RCC299_ 6
Micromonas_pusilla_CCMP1545_v3.0 5
Cyanidioschyzon_merolae_strain_10D_22 2
Cyanidioschyzon_merolae 2
Porphyridium_purpureum_02_2012 10
Thecamonas_trahens_ATCC_50062_ 5
Bigelowiella_natans_CCMP2755_22 8
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 3
Ectocarpus_siliculosus 9
Aureococcus_anophagefferens_ 3
Albugo_laibachii_22 11
Pythium_iwayamai_DAOM_BR242034_22 12
Pythium_arrhenomanes_ATCC_12531_22 8
Pythium_ultimum_v1.7-2 16
Pythium_aphanidermatum_DAOM_BR444_22 11
Pythium_irregulare_DAOM_BR486_22 14
Pythium_vexans_DAOM_BR484_22 14
Phytophthora_ramorum_1.1   (Sudden oak death agent)   15
Phytophthora_sojae_1.1 16
Phytophthora_infestans_T30-4_ 13
Phytophthora_capsici_ 13
Hyaloperonospora_arabidopsidis_22 15
Phaeodactylum_tricornutumCCAP_1055/1 10
Fragilariopsis_cylindrus 18
Thalassiosira_pseudonana_CCMP1335 9
Perkinsus_marinus_ATCC_50983_ 1
Paramecium_tetraurelia_ 57
Tetrahymena_thermophila_SB210_1_ 9
Cryptosporidium_hominis 1
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 1
Naegleria_gruberi_ 2
Guillardia_theta_CCMP2712_v1.0_ 9
Emiliania_huxleyi_CCMP1516_ 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   26
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   13
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   8
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   8
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   15
Cryptococcus_neoformans_var._grubii_H99_ 13
Cryptococcus_neoformans_B-3501A_ 12
Cryptococcus_neoformans_JEC21_ 12
Paracoccidioides_brasiliensis_Pb01_ 12
Paracoccidioides_brasiliensis_Pb03_ 13
Coccidioides_posadasii_str._Silveira_ 11
Coccidioides_immitis_RMSCC_3703_ 13
Coccidioides_immitis_RMSCC_2394_ 12
Coccidioides_immitis_H538.4_ 13
Ajellomyces_dermatitidis_ER-3_ 12
Histoplasma_capsulatum_H143 9
Histoplasma_capsulatum_H88 12
Histoplasma_capsulatum_G186AR 11
Aspergillus_fumigatus_A1163_ 18
Candida_albicans_WO-1_ 4
Saccharomyces_cerevisiae_UC5 7
Saccharomyces_cerevisiae_PW5 7
Saccharomyces_cerevisiae_FL100 5
Saccharomyces_cerevisiae_CLIB324 3
Saccharomyces_cerevisiae_CBS7960 6
Saccharomyces_cerevisiae_YJM269 6
Saccharomyces_cerevisiae_T7 8
Saccharomyces_cerevisiae_FostersB 4
Saccharomyces_cerevisiae_FostersO 4
Saccharomyces_cerevisiae_VL3 6
Saccharomyces_cerevisiae_Vin13 7
Saccharomyces_cerevisiae_LalvinQA23 8
Saccharomyces_cerevisiae_AWRI796 6
Saccharomyces_cerevisiae_Sigma1278b 8
Saccharomyces_cerevisiae_W303 8
Saccharomyces_cerevisiae_JAY291 7
Saccharomyces_cerevisiae_AWRI1631 4
Saccharomyces_cerevisiae_YPS163 2
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_T73 3
Saccharomyces_cerevisiae_CLIB215 6
Saccharomyces_cerevisiae_Y10 3
Saccharomyces_cerevisiae_YJM789_ 8
Saccharomyces_cerevisiae_YJM789 8
Saccharomyces_cerevisiae_RM11-1a 8
Saccharomyces_cerevisiae_RM11-1a_ 8
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   8
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 8
Batrachochytrium_dendrobatidis_JAM81_ 11
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   34
Hordeum_vulgare_22   (Domesticated barley)   79
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   63

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   20
Pan_troglodytes_69_2.1.4   (Chimpanzee)   15
Gorilla_gorilla_69_3.1   (Western gorilla)   18
Pongo_abelii_69_2   (Sumatran orangutan)   17
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   15
Macaca_mulatta_69_1   (Rhesus monkey)   15
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   16
Otolemur_garnettii_69_3   (Small-eared galago)   13
Microcebus_murinus_69_1   (Gray mouse lemur)   11
Rattus_norvegicus_69_3.4   (Norway rat)   15
Mus_musculus_69_38   (House mouse)   17
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   11
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   14
Cavia_porcellus_69_3   (Domestic guinea pig)   17
Oryctolagus_cuniculus_69_2   (Rabbit)   17
Ochotona_princeps_69   (American pika)   9
Tupaia_belangeri_69   (Northern tree shrew)   9
Sus_scrofa_69_10.2   (Pig)   14
Bos_taurus_69_3.1   (Cattle)   18
Vicugna_pacos_69_1   (Alpaca)   9
Tursiops_truncatus_69_1   (Bottlenose dolphin)   12
Mustela_putorius_furo_69_1.0   (Domestic ferret)   18
Ailuropoda_melanoleuca_69_1   (Giant panda)   15
Canis_familiaris_69_3.1   (Dog)   18
Felis_catus_69   (Domestic cat)   9
Equus_caballus_69_2   (Horse)   13
Myotis_lucifugus_69_2.0   (Little brown bat)   16
Pteropus_vampyrus_69_1   (Large flying fox)   14
Sorex_araneus_69_1   (European shrew)   4
Erinaceus_europaeus_69   (Western European hedgehog)   6
Procavia_capensis_69_1   (Cape rock hyrax)   13
Loxodonta_africana_69_3   (African savanna elephant)   14
Echinops_telfairi_69   (Small Madagascar hedgehog)   6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8
Macropus_eugenii_69_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   15
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   16
Ornithorhynchus_anatinus_69_5   (Platypus)   8
Petromyzon_marinus_69_7.0   (Sea lamprey)   7
Meleagris_gallopavo_69_2   (Turkey)   10
Gallus_gallus_69_2   (Chicken)   10
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   10
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   11
Anolis_carolinensis_69_2.0   (Green anole)   12
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   15
Latimeria_chalumnae_69_1   (Coelacanth)   15
Gadus_morhua_69_1   (Atlantic cod)   17
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   21
Takifugu_rubripes_69_4   (Torafugu)   18
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   18
Oryzias_latipes_69_1   (Japanese medaka)   19
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   24
Oreochromis_niloticus_69_1.0   (Nile tilapia)   27
Danio_rerio_69_9   (Zebrafish)   25
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   9
Ciona_intestinalis_69   (Vase tunicate)   10
Drosophila_melanogaster_69_5   (Fruit fly)   6
Caenorhabditis_elegans_69_215   (Roundworm)   10
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   8
Arabidopsis_thaliana_10   (Thale cress)   55

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   53
Homo_sapiens__(NCBI_version)   (Human)   23
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   17
Loa_loa_v3.3_(Request)   (Eye worm)   7
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   8
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   7
Moniliophthora_perniciosa_FA553__(Genome_survey) 2
Encephalitozoon_intestinalis__(endoparasite) 1
Encephalitozoon_cuniculi_(endoparasite) 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Lotus_japonicus__(Early_assembly) 16
Malus_x_domestica_(Duplicate)   (Apple)   74
Ricinus_communis__(Early_assembly)   (Castor bean)   30
Nicotiana_benthamiana_0.4.4_(Early_draft) 70
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   43
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   44
Phoenix_dactylifera__(Early_draft)   (Date palm)   22
Protozoadb_2010_08_(Protozoadb) 7
UniProt__viral_sequences_(Viral) 51
STRING_v9.0.5_(STRING) 1487
TargetDB__(Targets) 33
NCBI_2017_08_genome 19972
Uniprot_2018_03_genome 115270
NCBI_viral_sequences_(Viral) 2

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