SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,58104,_gap_,53850,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

58104 - Methyl-accepting chemotaxis protein (MCP) signaling domain
53850 - Periplasmic binding protein-like II

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Alkaliphilus_metalliredigens_QYMF 1
Clostridium_botulinum_A_str._ATCC_3502 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1

Strains
Genome     Number
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Myxococcus_stipitatus_DSM_14675 1

Others
Genome     Number
Uniprot_2018_03_genome 637
NCBI_2017_08_genome 152
STRING_v9.0.5_(STRING) 10

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