SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,82282 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82282 - Homocysteine S-methyltransferase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 3
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Adineta_vaga 0
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Nasonia_vitripennis_   (Jewel wasp)   1
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 1
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   1
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 0
Sarcoptes_scabiei 0
Pristionchus_pacificus_ 1
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   0
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 0
Amphimedon_queenslandica 0
Trichoplax_adhaerens_ 1
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 0
Mortierella_verticillata_NRRL_6337_ 0
Phycomyces_blakesleeanus_ 0
Rhizomucor_miehei_CAU432_ 1
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 1
Microbotryum_violaceum_22 1
Sphaerobolus_stellatus_v1.0 1
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   1
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 1
Fomitiporia_mediterranea_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Dichomitus_squalens 1
Trametes_versicolor_v1.0 1
Daldinia_eschscholzii_EC12_v1.0 1
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 1
Neurospora_tetrasperma_ 1
Neurospora_crassa_OR74A_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Leptosphaeria_maculans_22 1
Stagonospora_nodorum_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Aspergillus_acidus_v1.0 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_flavus_NRRL3357_ 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Debaromyces_hansenii 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 1
Ashbya_gossypii_ATCC_10895_ 1
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Selaginella_moellendorffii_ 4
Pinus_taeda   (Loblolly pine)   2
Eucalyptus_grandis_v201   (Rose gum)   3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 10
Citrus_clementina_v165 4
Citrus_sinensis_v154   (Sweet orange)   5
Thellungiella_halophila_v173 3
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2
Capsella_rubella_v183 3
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   5
Carica_papaya_   (Papaya)   3
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   2
Glycine_max_v109   (Soybean)   6
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   5
Manihot_esculenta_v147   (Cassava)   6
Populus_trichocarpa_v156   (Black cottonwood)   4
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   3
Solanum_lycopersicum_v.2.3   (Tomato)   2
Solanum_tuberosum_   (Potato)   3
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 7
Triticum_aestivum_22   (Bread wheat)   2
Brachypodium_distachyon_   (Stiff brome)   3
Oryza_barthii_22   (African wild rice)   3
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 3
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 2
Oryza_nivara_22 3
Oryza_brachyantha_22   (Malo sina)   2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   4
Oryza_sativa_v193   (Rice)   4
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   6
Zea_mays_v181   (Maize)   6
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   3
Amborella_trichopoda_22 1
Physcomitrella_patens 3
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 1
Cyanophora_paradoxa_ 1
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 1
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_cruzi_strain_CL_Brener 1
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 1
Aureococcus_anophagefferens_ 1
Albugo_laibachii_22 2
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 1
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 1
Perkinsus_marinus_ATCC_50983_ 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 0
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 2
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 1
Synechocystis_sp._PCC_6803 1
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 0
Geodermatophilus_obscurus_DSM_43160 0
Frankia_sp._EAN1pec 0
Streptosporangium_roseum_DSM_43021 0
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 0
Streptomyces_scabiei_87.22 0
Amycolatopsis_mediterranei_U32 0
Nocardioides_sp._JS614 0
Microlunatus_phosphovorus_NM-1 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_bronchialis_DSM_43247 0
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 0
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_avium_104 0
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 0
Mycobacterium_marinum_M 0
Mycobacterium_smegmatis_str._MC2_155 0
Corynebacterium_resistens_DSM_45100 0
Corynebacterium_kroppenstedtii_DSM_44385 0
Intrasporangium_calvum_DSM_43043 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_sp._FB24 0
Actinomyces_sp._F0330 1
Roseiflexus_sp._RS-1 0
Truepera_radiovictrix_DSM_17093 0
Deinococcus_deserti_VCD115 0
Deinococcus_maricopensis_DSM_21211 0
Deinococcus_geothermalis_DSM_11300 0
Deinococcus_proteolyticus_MRP 0
Deinococcus_radiodurans_R1 0
Oceanithermus_profundus_DSM_14977 0
Meiothermus_ruber_DSM_1279 0
Thermus_sp._CCB_US3_UF1 0
Thermus_scotoductus_SA-01 0
Thermus_thermophilus_HB27 0
Veillonella_parvula_DSM_2008 1
Thermaerobacter_marianensis_DSM_12885 0
Desulfosporosinus_acidiphilus_SJ4 0
Dehalobacter_sp._DCA 0
Dehalobacter_sp._CF 0
Clostridium_lentocellum_DSM_5427 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_cellulovorans_743B 0
Clostridium_acetobutylicum_ATCC_824 0
Lactobacillus_helveticus_DPC_4571 1
Kyrpidia_tusciae_DSM_2912 0
Gemmatimonas_aurantiaca_T-27 0
Melioribacter_roseus_P3M 0
Ignavibacterium_album_JCM_16511 0
Pelodictyon_phaeoclathratiforme_BU-1 0
Chlorobium_luteolum_DSM_273 0
Chlorobium_phaeobacteroides_DSM_266 0
Chlorobium_phaeovibrioides_DSM_265 0
Chlorobium_limicola_DSM_245 0
Chlorobaculum_parvum_NCIB_8327 0
Chlorobium_tepidum_TLS 0
Chloroherpeton_thalassium_ATCC_35110 0
Prosthecochloris_aestuarii_DSM_271 0
Haliscomenobacter_hydrossis_DSM_1100 0
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Rhodothermus_marinus_DSM_4252 0
Flexibacter_litoralis_DSM_6794 0
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 1
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 0
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 0
Paludibacter_propionicigenes_WB4 0
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 0
Bacteroides_sp._CF50 0
Prevotella_melaninogenica_ATCC_25845 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 0
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 0
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 1
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 1
Gramella_forsetii_KT0803 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 0
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 1
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 1
Flavobacteriaceae_bacterium_3519-10 1
Polaribacter_sp._MED152 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_johnsoniae_UW101 1
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 0
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 0
Coraliomargarita_akajimensis_DSM_45221 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Sphaerochaeta_pleomorpha_str._Grapes 0
Sphaerochaeta_globus_str._Buddy 0
Spirochaeta_caldaria_DSM_7334 0
Treponema_primitia_ZAS-2 0
Treponema_brennaborense_DSM_12168 0
Spirochaeta_africana_DSM_8902 0
Spirochaeta_thermophila_DSM_6192 0
Candidatus_Chloracidobacterium_thermophilum_B 0
Granulicella_tundricola_MP5ACTX9 1
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 1
Terriglobus_roseus_DSM_18391 1
Candidatus_Nitrospira_defluvii 0
Candidatus_Methylomirabilis_oxyfera 0
Bacteriovorax_marinus_SJ 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Dechloromonas_aromatica_RCB 0
Thauera_sp._MZ1T 0
Azoarcus_sp._KH32C 0
Azoarcus_sp._BH72 0
Aromatoleum_aromaticum_EbN1 0
Dechlorosoma_suillum_PS 0
Pseudogulbenkiania_sp._NH8B 0
Laribacter_hongkongensis_HLHK9 0
Chromobacterium_violaceum_ATCC_12472 0
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
beta_proteobacterium_CB 1
Methylibium_petroleiphilum_PM1 1
Thiomonas_arsenitoxydans 1
Thiomonas_intermedia_K12 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 2
Burkholderia_glumae_BGR1 1
Verminephrobacter_eiseniae_EF01-2 1
Alicycliphilus_denitrificans_K601 1
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_sp._JS666 1
Polaromonas_naphthalenivorans_CJ2 1
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 1
Acidovorax_sp._JS42 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 1
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 0
Janthinobacterium_sp._Marseille 0
Herbaspirillum_seropedicae_SmR1 0
Pusillimonas_sp._T7-7 0
Bordetella_petrii_DSM_12804 0
Bordetella_avium_197N 0
Bordetella_pertussis_Tohama_I 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 0
Achromobacter_xylosoxidans 0
Thiobacillus_denitrificans_ATCC_25259 0
Nitrosospira_multiformis_ATCC_25196 0
Nitrosomonas_sp._Is79A3 0
Nitrosomonas_eutropha_C91 0
Nitrosomonas_europaea_ATCC_19718 0
Sideroxydans_lithotrophicus_ES-1 0
Gallionella_capsiferriformans_ES-2 0
Methylotenera_versatilis_301 0
Methylotenera_mobilis_JLW8 0
Methylovorus_sp._MP688 0
Methylovorus_glucosetrophus_SIP3-4 0
Methylobacillus_flagellatus_KT 0
Magnetococcus_marinus_MC-1 0
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 1
Erythrobacter_litoralis_HTCC2594 1
Sphingopyxis_alaskensis_RB2256 1
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 2
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 1
Sphingomonas_wittichii_RW1 1
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1
Maricaulis_maris_MCS10 1
Hirschia_baltica_ATCC_49814 1
Hyphomonas_neptunium_ATCC_15444 1
Pseudovibrio_sp._FO-BEG1 0
Ruegeria_sp._TM1040 1
Ketogulonicigenium_vulgare_Y25 0
Ketogulonigenium_vulgarum_WSH-001 0
Roseobacter_litoralis_Och_149 1
Roseobacter_denitrificans_OCh_114 1
Rhodobacter_sphaeroides_ATCC_17029 1
Rhodobacter_capsulatus_SB_1003 1
Paracoccus_denitrificans_PD1222 0
Rhodospirillum_photometricum_DSM_122 0
Acetobacter_pasteurianus_IFO_3283-01 0
Polymorphum_gilvum_SL003B-26A1 0
Candidatus_Puniceispirillum_marinum_IMCC1322 1
Starkeya_novella_DSM_506 0
Xanthobacter_autotrophicus_Py2 0
Azorhizobium_caulinodans_ORS_571 0
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_sp._4-46 0
Methylobacterium_populi_BJ001 0
Methylobacterium_nodulans_ORS_2060 0
Methylobacterium_radiotolerans_JCM_2831 0
Parvibaculum_lavamentivorans_DS-1 1
Candidatus_Hodgkinia_cicadicola_Dsem 0
Ochrobactrum_anthropi_ATCC_49188 0
Brucella_microti_CCM_4915 0
Brucella_pinnipedialis_B2/94 0
Brucella_canis_ATCC_23365 0
Brucella_suis_ATCC_23445 0
Brucella_melitensis_ATCC_23457 0
Brucella_ovis_ATCC_25840 0
Brucella_abortus_S19 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_medicae_WSM419 0
Sinorhizobium_meliloti_AK83 0
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 0
Rhizobium_etli_CIAT_652 0
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 0
Agrobacterium_vitis_S4 0
Mesorhizobium_sp._BNC1 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Methylocella_silvestris_BL2 0
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Pelagibacterium_halotolerans_B2 0
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Oligotropha_carboxidovorans_OM4 0
Rhodopseudomonas_palustris_BisA53 0
Nitrobacter_winogradskyi_Nb-255 0
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 0
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 0
Aggregatibacter_aphrophilus_NJ8700 0
Haemophilus_parainfluenzae_T3T1 0
Oceanimonas_sp._GK1 0
Tolumonas_auensis_DSM_9187 0
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Aliivibrio_salmonicida_LFI1238 0
Vibrio_fischeri_MJ11 0
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_splendidus_LGP32 0
Vibrio_anguillarum_775 0
Vibrio_furnissii_NCTC_11218 0
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Photobacterium_profundum_SS9 0
Psychromonas_ingrahamii_37 0
Ferrimonas_balearica_DSM_9799 0
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 0
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_sp._4H-3-7+YE-5 1
Glaciecola_nitratireducens_FR1064 1
Marinobacter_adhaerens_HP15 0
Marinobacter_sp._BSs20148 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 1
Kangiella_koreensis_DSM_16069 0
Hahella_chejuensis_KCTC_2396 0
Alcanivorax_borkumensis_SK2 0
Marinomonas_posidonica_IVIA-Po-181 0
Marinomonas_sp._MWYL1 0
Marinomonas_mediterranea_MMB-1 0
Chromohalobacter_salexigens_DSM_3043 0
Halomonas_elongata_DSM_2581 0
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 0
Rhodanobacter_denitrificans 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_suwonensis_11-1 1
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Halothiobacillus_neapolitanus_c2 0
Spiribacter_sp._UAH-SP71 0
Alkalilimnicola_ehrlichii_MLHE-1 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Thioalkalivibrio_sp._K90mix 0
Halorhodospira_halophila_SL1 0
Allochromatium_vinosum_DSM_180 0
Thiocystis_violascens_DSM_198 0
Nitrosococcus_watsonii_C-113 0
Nitrosococcus_halophilus_Nc4 0
Nitrosococcus_oceani_ATCC_19707 0
gamma_proteobacterium_HdN1 0
Candidatus_Vesicomyosocius_okutanii_HA 0
Providencia_stuartii_MRSN_2154 0
Proteus_mirabilis_HI4320 0
Edwardsiella_ictaluri_93-146 0
Edwardsiella_tarda_EIB202 0
Rahnella_sp._Y9602 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 0
Serratia_plymuthica_AS9 0
Dickeya_dadantii_Ech703 0
Dickeya_zeae_Ech1591 0
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Pantoea_sp._At-9b 0
Pantoea_vagans_C9-1 0
Pantoea_ananatis_LMG_20103 1
Erwinia_billingiae_Eb661 0
Escherichia_blattae_DSM_4481 0
Cronobacter_turicensis_z3032 0
Cronobacter_sakazakii_ES15 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Shigella_sonnei_Ss046 0
Shigella_flexneri_5_str._8401 0
Shigella_dysenteriae_Sd197 0
Salmonella_bongori_NCTC_12419 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Klebsiella_oxytoca_E718 0
Klebsiella_variicola_At-22 0
Klebsiella_pneumoniae_NTUH-K2044 0
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_sp._R4-368 0
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 0
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_stutzeri_A1501 0
Pseudomonas_fulva_12-X 0
Pseudomonas_putida_F1 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_mendocina_ymp 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 0
Psychrobacter_sp._G 0
Psychrobacter_sp._PRwf-1 0
Psychrobacter_arcticus_273-4 0
Psychrobacter_cryohalolentis_K5 0
Acinetobacter_oleivorans_DR1 0
Acinetobacter_calcoaceticus_PHEA-2 0
Acinetobacter_sp._ADP1 0
Methylophaga_sp._JAM1 0
Cycloclasticus_sp._P1 0
Thiomicrospira_crunogena_XCL-2 0
Thioalkalimicrobium_cyclicum_ALM1 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2
Trypanosoma_brucei_Lister_427_v4.1 1
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Prochlorococcus_marinus_str._MIT_9313 0
Prochlorococcus_marinus_str._MIT_9303 0
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Actinoplanes_friuliensis_DSM_7358 0
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_sp._JDM601 0
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_liflandii_128FXT 0
Mycobacterium_sp._KMS 0
Mycobacterium_yongonense_05-1390 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_avium_subsp._paratuberculosis_MAP4 0
Mycobacterium_avium_subsp._paratuberculosis_K-10 0
Mycobacterium_gilvum_Spyr1 0
Mycobacterium_smegmatis_str._MC2_155 0
Corynebacterium_terpenotabidum_Y-11 1
Actinomyces_viscosus_C505 1
Chthonomonas_calidirosea_T49 0
Deinococcus_peraridilitoris_DSM_19664 0
Thermus_oshimai_JL-2 0
Thermus_thermophilus_JL-18 0
Thermus_thermophilus_SG0.5JP17-16 0
Thermus_thermophilus_HB8 0
Desulfosporosinus_meridiei_DSM_13257 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_pasteurianum_BC1 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Paenibacillus_mucilaginosus_KNP414 0
Chlorobium_phaeobacteroides_BS1 0
Rhodothermus_marinus_SG0.5JP17-172 0
Echinicola_vietnamensis_DSM_17526 1
Emticicia_oligotrophica_DSM_17448 0
Prevotella_dentalis_DSM_3688 0
Alistipes_shahii_WAL_8301 0
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0
Nonlabens_dokdonensis_DSW-6 1
Riemerella_anatipestifer_RA-CH-2 1
Riemerella_anatipestifer_RA-CH-1 1
Riemerella_anatipestifer_RA-GD 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 0
Spirochaeta_thermophila_DSM_6578 0
Sorangium_cellulosum_So0157-2 0
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Bordetella_pertussis_CS 0
Bordetella_parapertussis_18323 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 0
Nitrosomonas_sp._AL212 0
Sulfuricella_denitrificans_skB26 0
Caulobacter_crescentus_CB15 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1
Zymomonas_mobilis_subsp._mobilis_CP4 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 1
Paracoccus_aminophilus_JCM_7686 0
Candidatus_Endolissoclinum_faulkneri_L2 1
Acetobacter_pasteurianus_IFO_3283-12 0
Acetobacter_pasteurianus_IFO_3283-01-42C 0
Acetobacter_pasteurianus_IFO_3283-32 0
Acetobacter_pasteurianus_IFO_3283-26 0
Acetobacter_pasteurianus_IFO_3283-22 0
Acetobacter_pasteurianus_IFO_3283-07 0
Acetobacter_pasteurianus_IFO_3283-03 0
Methylobacterium_extorquens_DM4 0
Methylobacterium_extorquens_PA1 0
Brucella_ceti_TE10759-12 0
Brucella_ceti_TE28753-12 1
Brucella_canis_HSK_A52141 0
Brucella_suis_VBI22 0
Brucella_suis_1330 0
Brucella_suis_1330 0
Brucella_melitensis_NI 0
Brucella_melitensis_M5-90 0
Brucella_melitensis_M28 0
Brucella_melitensis_bv._1_str._16M 0
Brucella_abortus_A13334 0
Brucella_melitensis_biovar_Abortus_2308 0
Brucella_abortus_bv._1_str._9-941 0
Sinorhizobium_fredii_USDA_257 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_2011 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_tropici_CIAT_899 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Hyphomicrobium_nitrativorans_NL23 1
Hyphomicrobium_denitrificans_1NES1 1
Oligotropha_carboxidovorans_OM5 0
Oligotropha_carboxidovorans_OM5 0
Rhodopseudomonas_palustris_DX-1 0
Rhodopseudomonas_palustris_TIE-1 0
Rhodopseudomonas_palustris_HaA2 0
Rhodopseudomonas_palustris_BisB5 0
Rhodopseudomonas_palustris_BisB18 0
Rhodopseudomonas_palustris_CGA009 0
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 0
Simiduia_agarivorans_SA1_=_DSM_21679 0
Mannheimia_succiniciproducens_MBEL55E 0
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 0
Mannheimia_haemolytica_USMARC_2286 0
Mannheimia_haemolytica_M42548 0
Mannheimia_haemolytica_D174 0
Mannheimia_haemolytica_D153 0
Mannheimia_haemolytica_USDA-ARS-USMARC-183 0
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Aeromonas_hydrophila_ML09-119 0
Vibrio_fischeri_ES114 0
Vibrio_sp._EJY3 0
Vibrio_parahaemolyticus_BB22OP 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 0
Thalassolituus_oleivorans_MIL-1 0
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Thioalkalivibrio_nitratireducens_DSM_14787 0
Thioflavicoccus_mobilis_8321 0
Proteus_mirabilis_BB2000 0
Morganella_morganii_subsp._morganii_KT 0
Edwardsiella_tarda_C07-087 0
Edwardsiella_tarda_FL6-60 0
Rahnella_aquatilis_HX2 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 0
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Dickeya_dadantii_Ech586 0
Dickeya_dadantii_3937 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 0
Pantoea_ananatis_AJ13355 1
Cronobacter_sakazakii_CMCC_45402 0
Cronobacter_sakazakii_SP291 0
Raoultella_ornithinolytica_B6 0
Shigella_sonnei_53G 0
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Shigella_dysenteriae_1617 0
Shigella_boydii_Sb227 0
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 0
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 0
Klebsiella_oxytoca_KCTC_1686 0
Klebsiella_pneumoniae_JM45 0
Klebsiella_pneumoniae_CG43 0
Klebsiella_pneumoniae_KCTC_2242 0
Klebsiella_pneumoniae_342 0
Klebsiella_pneumoniae_subsp._pneumoniae_1084 0
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 0
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 0
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 0
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E24377A 0
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_JJ1886 0
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_NA114 0
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_UM146 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_IHE3034 0
Escherichia_coli_UMNK88 0
Escherichia_coli_O83:H1_str._NRG_857C 0
Escherichia_coli_ABU_83972 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_LF82 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 0
Escherichia_coli_S88 0
Escherichia_coli_IAI1 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE15 0
Escherichia_coli_SE11 0
Escherichia_coli_APEC_O1 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_UTI89 0
Escherichia_coli_536 0
Escherichia_coli_HS 0
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_CFT073 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_SCF1 0
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ENHKU01 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Azotobacter_vinelandii_CA6 0
Azotobacter_vinelandii_CA 0
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_syringae_pv._phaseolicola_1448A 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_stutzeri_RCH2 0
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_mendocina_NK-01 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Acinetobacter_genomosp._13TU__RUH2624 0
Acinetobacter_sp.__SH024 0
Acinetobacter_calcoaceticus_ruh2202 0
Acinetobacter_baumannii_ZW85-1 0
Acinetobacter_baumannii_TYTH-1 0
Acinetobacter_baumannii_BJAB0868 0
Acinetobacter_baumannii_BJAB0715 0
Acinetobacter_baumannii_BJAB07104 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_D1279779 0
Acinetobacter_baumannii_MDR-TJ 0
Acinetobacter_baumannii_1656-2 0
Acinetobacter_baumannii__ATCC_19606 0
Acinetobacter_baumannii_AB307-0294 0
Acinetobacter_baumannii_AYE 0
Acinetobacter_baumannii_MDR-ZJ06 0
Acinetobacter_baumannii_AB0057 0
Acinetobacter_baumannii_ACICU 0
Acinetobacter_radioresistens__SH164 0
Acinetobacter_junii__SH205 0
Acinetobacter_johnsonii__SH046 0
Acinetobacter_lwoffii__SH145 0
Methylophaga_sp._JAM7 0
Cycloclasticus_zancles_7-ME 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Equus_caballus_69_2   (Horse)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   1
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   3

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Lotus_japonicus__(Early_assembly) 3
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   4
Nicotiana_benthamiana_0.4.4_(Early_draft) 4
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2
Phoenix_dactylifera__(Early_draft)   (Date palm)   1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 3
TargetDB__(Targets) 50
STRING_v9.0.5_(STRING) 144
Uniprot_2018_03_genome 9834
NCBI_2017_08_genome 5620
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 2
Protein_Data_Bank_(all_PDB_sequenc) 0
Protozoadb_2010_08_(Protozoadb) 15

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