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Domain combinations for _gap_,82671,49854,49854,57424,57424,50494 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82671 - SEA domain
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
50494 - Trypsin-like serine proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ovis_aries_76_3.1   (Sheep)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   3
Takifugu_rubripes_76_4   (Torafugu)   0
Oryzias_latipes_76_1   (Japanese medaka)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   1

Longest transcript per gene
Genome     Number
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 1092
NCBI_2017_08_genome 197

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