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Domain combinations for _gap_,82693,_gap_,82714,82693,82866,_gap_,82693,_gap_,82714,82866,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

82693 - Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
82714 - Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
82693 - Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
82866 - Multidrug efflux transporter AcrB transmembrane domain
82693 - Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
82714 - Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
82866 - Multidrug efflux transporter AcrB transmembrane domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Synechococcus_elongatus_PCC_7942 1
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 1
Gloeocapsa_sp._PCC_7428 1
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 1
Gloeobacter_violaceus_PCC_7421 3
Calothrix_sp._PCC_7507 1
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 2
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 1
Kytococcus_sedentarius_DSM_20547 1
Brachybacterium_faecium_DSM_4810 1
Renibacterium_salmoninarum_ATCC_33209 1
Micrococcus_luteus_NCTC_2665 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Truepera_radiovictrix_DSM_17093 1
Syntrophobotulus_glycolicus_DSM_8271 1
Clostridium_difficile_630 1
Bacillus_selenitireducens_MLS10 1
Bacillus_halodurans_C-125 1
Bacillus_pseudofirmus_OF4 1
Chloroherpeton_thalassium_ATCC_35110 1
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 1
Rhodothermus_marinus_DSM_4252 1
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 1
Prevotella_melaninogenica_ATCC_25845 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_fragilis_YCH46 1
Solitalea_canadensis_DSM_3403 2
Pedobacter_heparinus_DSM_2366 1
Owenweeksia_hongkongensis_DSM_17368 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_johnsoniae_UW101 1
Isosphaera_pallida_ATCC_43644 2
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 2
Turneriella_parva_DSM_21527 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 3
Leptospira_interrogans_serovar_Lai_str._IPAV 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Candidatus_Chloracidobacterium_thermophilum_B 2
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 1
Granulicella_mallensis_MP5ACTX8 2
Terriglobus_roseus_DSM_18391 2
Bdellovibrio_bacteriovorus_HD100 1
Helicobacter_mustelae_12198 1
Syntrophus_aciditrophicus_SB 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Desulfovibrio_africanus_str._Walvis_Bay 1
Geobacter_uraniireducens_Rf4 1
Pelobacter_propionicus_DSM_2379 1
Haliangium_ochraceum_DSM_14365 3
Sorangium_cellulosum_'So_ce_56' 2
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 2
Myxococcus_xanthus_DK_1622 3
Myxococcus_fulvus_HW-1 3
Azoarcus_sp._KH32C 1
Pseudogulbenkiania_sp._NH8B 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1
Rubrivivax_gelatinosus_IL144 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 2
Burkholderia_xenovorans_LB400 2
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 2
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_gladioli_BSR3 1
Verminephrobacter_eiseniae_EF01-2 1
Delftia_sp._Cs1-4 2
Delftia_acidovorans_SPH-1 3
Polaromonas_sp._JS666 1
Polaromonas_naphthalenivorans_CJ2 2
Acidovorax_sp._KKS102 1
Comamonas_testosteroni_CNB-2 1
Collimonas_fungivorans_Ter331 1
Advenella_kashmirensis_WT001 1
Taylorella_equigenitalis_MCE9 1
Bordetella_petrii_DSM_12804 1
Magnetococcus_marinus_MC-1 1
Caulobacter_sp._K31 1
Phenylobacterium_zucineum_HLK1 1
Erythrobacter_litoralis_HTCC2594 1
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 1
Rhodobacter_sphaeroides_ATCC_17029 1
Rhodospirillum_centenum_SW 1
Starkeya_novella_DSM_506 1
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_sp._4-46 2
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 3
Methylobacterium_radiotolerans_JCM_2831 1
Brucella_pinnipedialis_B2/94 1
Brucella_canis_ATCC_23365 1
Brucella_melitensis_ATCC_23457 1
Brucella_ovis_ATCC_25840 1
Sinorhizobium_fredii_NGR234 3
Sinorhizobium_medicae_WSM419 3
Sinorhizobium_meliloti_AK83 3
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 2
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 2
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2
Mesorhizobium_loti_MAFF303099 2
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_sp._MC1 2
Hyphomicrobium_denitrificans_ATCC_51888 3
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_winogradskyi_Nb-255 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 1
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 1
Shewanella_sp._MR-4 1
Shewanella_putrefaciens_CN-32 1
Glaciecola_nitratireducens_FR1064 1
Marinobacter_adhaerens_HP15 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Thioalkalivibrio_sp._K90mix 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
gamma_proteobacterium_HdN1 1
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1
Candidatus_Vesicomyosocius_okutanii_HA 1
Psychrobacter_sp._G 1
Psychrobacter_sp._PRwf-1 1
Psychrobacter_cryohalolentis_K5 1

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Strains
Genome     Number
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_elongatus_PCC_6301 1
Oscillatoria_acuminata_PCC_6304 2
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._ATCC_51142 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Actinoplanes_friuliensis_DSM_7358 1
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_botulinum_E3_str._Alaska_E43 1
Bacillus_infantis_NRRL_B-14911 1
Rhodothermus_marinus_SG0.5JP17-172 1
Echinicola_vietnamensis_DSM_17526 1
Emticicia_oligotrophica_DSM_17448 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Singulisphaera_acidiphila_DSM_18658 3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 2
Leptospira_interrogans_serovar_Lai_str._56601 3
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 4
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Bdellovibrio_exovorus_JSS 1
Desulfovibrio_vulgaris_RCH1 1
Desulfovibrio_vulgaris_str._Hildenborough 1
Sorangium_cellulosum_So0157-2 3
Myxococcus_stipitatus_DSM_14675 3
Burkholderia_sp._YI23 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Taylorella_equigenitalis_14/56 1
Taylorella_equigenitalis_ATCC_35865 1
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 1
Paracoccus_aminophilus_JCM_7686 1
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Brucella_ceti_TE10759-12 1
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_melitensis_NI 1
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 3
Sinorhizobium_meliloti_2011 2
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 3
Sinorhizobium_meliloti_SM11 3
Sinorhizobium_meliloti_BL225C 3
Sinorhizobium_meliloti_1021 3
Rhizobium_etli_CFN_42 2
Rhizobium_etli_bv._mimosae_str._Mim1 3
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Mesorhizobium_australicum_WSM2073 1
Hyphomicrobium_nitrativorans_NL23 1
Hyphomicrobium_denitrificans_1NES1 2
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 2
Vibrio_nigripulchritudo_VibrioScope 2
Shewanella_sp._W3-18-1 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 0
Thioflavicoccus_mobilis_8321 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 26
STRING_v9.0.5_(STRING) 162
Uniprot_2018_03_genome 218106
NCBI_2017_08_genome 7606

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