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Domain combinations for _gap_,88713,_gap_,74650 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

88713 - Glycoside hydrolase/deacetylase
74650 - Galactose mutarotase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ochotona_princeps_76   (American pika)   1
Sorex_araneus_76_1   (European shrew)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Crassostrea_gigas_22   (Pacific oyster)   1
Monosiga_brevicollis_ 0
Linum_usitatissimum_v200   (Flax)   0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_violaceusniger_Tu_4113 0
Kribbella_flavida_DSM_17836 1
Chitinophaga_pinensis_DSM_2588 1
Parabacteroides_distasonis_ATCC_8503 1
Bacteroides_thetaiotaomicron_VPI-5482 0
Solitalea_canadensis_DSM_3403 1
Maribacter_sp._HTCC2170 1
Isosphaera_pallida_ATCC_43644 1
Planctomyces_brasiliensis_DSM_5305 1
Pirellula_staleyi_DSM_6068 1
Candidatus_Koribacter_versatilis_Ellin345 0

Strains
Genome     Number
Streptomyces_rapamycinicus_NRRL_5491 0
Deinococcus_peraridilitoris_DSM_19664 0
Singulisphaera_acidiphila_DSM_18658 1

Longest transcript per gene
Genome     Number
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ochotona_princeps_69   (American pika)   1
Sorex_araneus_69_1   (European shrew)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 2106
NCBI_2017_08_genome 282
TargetDB__(Targets) 0

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