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Domain combinations for _gap_,90096 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

90096 - Subunits of heterodimeric actin filament capping protein Capz

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Malassezia_globosa_CBS_7966_ 2
Sporisorium_reilianum_22 1
Ustilago_maydis_ 2
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Rhodotorula_graminis_WP1_v1.0 1
Microbotryum_violaceum_22 1
Wallemia_sebi_v1.0 1
Tremella_mesenterica_   (Witches' butter)   1
Podospora_anserina_ 1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Aspergillus_fumigatus_Af293 1
Candida_tropicalis_MYA-3404_ 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Catenaria_anguillulae_PL171_v1.0 1
Eucalyptus_grandis_v201   (Rose gum)   2
Gossypium_raimondii_v221 1
Thellungiella_halophila_v173 2
Cucumis_sativus_v122   (Cucumber)   2
Fragaria_vesca_   (Wild strawberry)   0
Actinidia_chinensis_Hongyang_ 0
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Trypanosoma_cruzi_strain_CL_Brener 0
Aureococcus_anophagefferens_ 1
Pythium_iwayamai_DAOM_BR242034_22 0
Hyaloperonospora_arabidopsidis_22 1
Perkinsus_marinus_ATCC_50983_ 1
Tetrahymena_thermophila_SB210_1_ 1
Cryptosporidium_muris 2
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Plasmodium_vivax_SaI-1_7.0 1
Symbiodinium_minutum_clade_B1_v1.2 0
Emiliania_huxleyi_CCMP1516_ 1

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Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Neospora_caninum_Nc-Liverpool_6.2 0

Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Takifugu_rubripes_69_4   (Torafugu)   1

Others
Genome     Number
TargetDB__(Targets) 0
Protozoadb_2010_08_(Protozoadb) 5
STRING_v9.0.5_(STRING) 14
NCBI_2017_08_genome 179
Uniprot_2018_03_genome 729

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