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Domain combinations for _gap_,90229,_gap_,57756,57756 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

90229 - CCCH zinc finger
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Drosophila_pseudoobscura_2.13 1
Drosophila_melanogaster_76_5   (Fruit fly)   1
Strigamia_maritima_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 2
Caenorhabditis_remanei_ 1
Trichinella_spiralis_22 1
Trypanosoma_vivax_ 1
Trypanosoma_congolense_2.4 2
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1

Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Trypanosoma_brucei_Lister_427_v4.1 1

Longest transcript per gene
Genome     Number
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Protozoadb_2010_08_(Protozoadb) 1
STRING_v9.0.5_(STRING) 6
NCBI_2017_08_genome 25
Uniprot_2018_03_genome 806

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