SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52540,_gap_,75553,_gap_,52540,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
75553 - Smc hinge domain
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

80 sequences contain the 52540,_gap_,75553,_gap_,52540,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Acinetobacter baumannii ATCC 17978: gi|126640853|ref|YP_001083837.1|

Taylorella equigenitalis MCE9: gi|319779223|ref|YP_004130136.1|

Ilyobacter polytropus DSM 2926: gi|310778882|ref|YP_003967215.1|

Persephonella marina EX-H1: gi|225851450|ref|YP_002731684.1|

Fervidobacterium pennivorans DSM 9078: gi|383787497|ref|YP_005472066.1|

Thermoanaerobacter wiegelii Rt8.B1: gi|345017773|ref|YP_004820126.1|

Clostridium phytofermentans ISDg: gi|160880575|ref|YP_001559543.1|

cyanobacterium UCYN-A: gi|284929413|ref|YP_003421935.1|

Synechococcus sp. PCC 6312: gi|427712677|ref|YP_007061301.1|

Guillardia theta CCMP2712 v1.0 : jgi|Guith1|147944|fgenesh2_pg.181_#_13

Trichomonas vaginalis : 92069.m00311

Toxoplasma gondii ME49: gb|TGME49_106310

Toxoplasma gondii VEG: gb|TGVEG_107770

Paramecium tetraurelia : GSPATP00012024001

Paramecium tetraurelia : PTETP11400006001

Paramecium tetraurelia : PTETP4500016001

Phytophthora ramorum 1.1: jgi|Phyra1_1|94953|C_scaffold_27000001

Physcomitrella patens: jgi|Phypa1_1|131965|e_gw1.91.14.1

Musa balbisiana: ITC1587_Bchr6_P17991

Sorghum bicolor : jgi|Sorbi1|5046774|Sb09g024390

Setaria italica v164: Si021007m|PACid:19701960

Aquilegia coerulea v195: Aquca_017_00121.1|PACid:22032083

Actinidia chinensis Hongyang : Achn018351

Populus trichocarpa v156: POPTR_0017s11950.1|PACid:18210506

Linum usitatissimum v200: Lus10024895|PACid:23178893

Medicago truncatula : Medtr1g051825.1

Medicago truncatula : Medtr1g051825.2

Medicago truncatula : Medtr1g051825.3

Arabidopsis lyrata : jgi|Araly1|323999|fgenesh1_pm.C_scaffold_5001543

Brassica rapa Chiifu-401 1.2: Bra025364

Citrus sinensis v154: orange1.1g000833m|PACid:18135012

Gossypium raimondii v221: Gorai.009G081300.5|PACid:26763813

Entamoeba histolytica 1: jCVI|EHI_050790

Entamoeba invadens 1.2: jCVI|EIN_212950

Candida albicans SC5314: CA0846

Candida tropicalis MYA-3404 : CTRT_01853

Arthroderma benhamiae CBS 112371 : ARB_00512

Microsporum canis CBS 113480 : MCYG_06181T0

Botrytis cinerea B05.10 : BC1T_10201

Glomerella graminicola 22: EFQ26151

Chaetomium globosum CBS 148.51 : CHGT_03165

Chaetomium globosum CBS 148.51 : CHGT_02599

Sporotrichum thermophile ATCC 42464 : jgi|Spoth1|115251|estExt_fgenesh1_pm.C_30862

Phanerochaete chrysosporium RP-78 2.1: jgi|Phchr1|126748|e_gwh2.7.29.1

Fomitiporia mediterranea v1.0: jgi|Fomme1|169982|estExt_Genemark1.C_9_t10409

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|172065|estExt_Genemark1.C_180062

Paxillus rubicundulus Ve08.2h10 v1.0: jgi|Paxru1|142879|e_gw1.286.9.1

Sporobolomyces roseus IAM 13481 : jgi|Sporo1|14253|e_gw1.7.36.1

Cronartium quercuum f. sp. fusiforme G11 v1.0: jgi|Croqu1|673752|fgenesh1_pm.154_#_10

Rhizopus oryzae RA 99-880 : RO3T_02085

Mortierella verticillata NRRL 6337 : MVEG_07456T0

Conidiobolus coronatus NRRL28638 v1.0: jgi|Conco1|55577|estExt_Genewise1Plus.C_210044

Proterospongia sp. ATCC 50818 : PTSG_02972T0

Hydra vulgaris: gi|449678677|ref|XP_002155805.2|

Echinococcus granulosus : EgrG_000803000.1

Echinococcus multilocularis : EmuJ_000803000.1

Caenorhabditis brenneri : CBN00372

Caenorhabditis brenneri : CBN31075

Pediculus humanus corporis : vb|PHUM470210-PA|EEB17527.1|structural

Solenopsis invicta v.2.2.3: SI2.2.0_01372

Solenopsis invicta v.2.2.3: SI2.2.0_06038

Harpegnathos saltator v3.3: Hsal_06900--XP_393700.2_APIME

Octopus bimaculoides 280: Ocbimv22009928m.p

Strongylocentrotus purpuratus v3.1: SPU_021629

Oreochromis niloticus 76_1.0: ENSONIP00000019505

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000007058

Tetraodon nigroviridis 76_8: ENSTNIP00000018137

Xenopus laevis : gi|147900881|ref|NP_001083742|

Xenopus laevis : gi|27263154|gb|CAD59446|

Anolis carolinensis 76_2.0: ENSACAP00000015459

Pelodiscus sinensis 76_1.0: ENSPSIP00000012071

Echinops telfairi 76: ENSETEP00000013514

Tursiops truncatus 76_1: ENSTTRP00000000912

Ochotona princeps 76: ENSOPRP00000003328

Cavia porcellus 76_3: ENSCPOP00000008594

Dipodomys ordii 76_1: ENSDORP00000009742

Rattus norvegicus 76_5.0: ENSRNOP00000004364

Macaca mulatta 76_1: ENSMMUP00000012176

Pongo abelii 76_2: ENSPPYP00000022806

Homo sapiens 76_38: ENSP00000364489