SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52738,47757,53335,_gap_,55785,55785,47384,55874 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52738 - Methylesterase CheB, C-terminal domain
47757 - Chemotaxis receptor methyltransferase CheR, N-terminal domain
53335 - S-adenosyl-L-methionine-dependent methyltransferases
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

28 sequences contain the 52738,47757,53335,_gap_,55785,55785,47384,55874 domain architecture in all genomes.

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Pseudomonas sp. VLB120: gi|557223598|ref|YP_008763813.1|

Nitrosococcus halophilus Nc4: gi|292491952|ref|YP_003527391.1|

Ruegeria sp. TM1040: gi|99080869|ref|YP_613023.1|

Polaromonas naphthalenivorans CJ2: gi|121604608|ref|YP_981937.1|

Ralstonia eutropha JMP134: gi|73538740|ref|YP_299107.1|

Burkholderia xenovorans LB400: gi|91778586|ref|YP_553794.1|

Burkholderia xenovorans LB400: gi|91780564|ref|YP_555771.1|

Stigmatella aurantiaca DW4/3-1: gi|310824337|ref|YP_003956695.1|

Sorangium cellulosum 'So ce 56': gi|162452466|ref|YP_001614833.1|

Haliangium ochraceum DSM 14365: gi|262196436|ref|YP_003267645.1|

Granulicella mallensis MP5ACTX8: gi|374309791|ref|YP_005056221.1|

Desulfurispirillum indicum S5: gi|317051166|ref|YP_004112282.1|

Zobellia galactanivorans: gi|340619865|ref|YP_004738318.1|

Croceibacter atlanticus HTCC2559: gi|298209092|ref|YP_003717271.1|

Zunongwangia profunda SM-A87: gi|295134124|ref|YP_003584800.1|

Runella slithyformis DSM 19594: gi|338212077|ref|YP_004656132.1|

Bacillus atrophaeus 1942: gi|311067401|ref|YP_003972324.1|

Paenibacillus mucilaginosus 3016: gi|379722990|ref|YP_005315121.1|

Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446: gi|258510676|ref|YP_003184110.1|

Nostoc sp. PCC 7524: gi|427729282|ref|YP_007075519.1|

Nostoc sp. PCC 7120: gi|17229208|ref|NP_485756.1|

'Nostoc azollae' 0708: gi|298491263|ref|YP_003721440.1|

Anabaena variabilis ATCC 29413: gi|75906539|ref|YP_320835.1|

Rivularia sp. PCC 7116: gi|427739079|ref|YP_007058623.1|

Rivularia sp. PCC 7116: gi|427733873|ref|YP_007053417.1|

Rivularia sp. PCC 7116: gi|427733874|ref|YP_007053418.1|

Gloeobacter violaceus PCC 7421: gi|37521423|ref|NP_924800.1|

Gloeobacter violaceus PCC 7421: gi|37523131|ref|NP_926508.1|