SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 81624,46946,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81624 - N-terminal domain of MutM-like DNA repair proteins
46946 - S13-like H2TH domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

227 sequences contain the 81624,46946,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Pseudomonas stutzeri A1501: gi|146281244|ref|YP_001171397.1|

alpha proteobacterium HIMB59: gi|406707515|ref|YP_006757867.1|

Geobacter daltonii FRC-32: gi|222053400|ref|YP_002535762.1|

Opitutus terrae PB90-1: gi|182414188|ref|YP_001819254.1|

Planctomyces brasiliensis DSM 5305: gi|325108920|ref|YP_004269988.1|

Sphingobacterium sp. 21: gi|326800630|ref|YP_004318449.1|

Pedobacter heparinus DSM 2366: gi|255531639|ref|YP_003092011.1|

Runella slithyformis DSM 19594: gi|338211023|ref|YP_004655074.1|

Chitinophaga pinensis DSM 2588: gi|256425446|ref|YP_003126099.1|

Niastella koreensis GR20-10: gi|375149898|ref|YP_005012339.1|

Paenibacillus polymyxa M1: gi|386041376|ref|YP_005960330.1|

Paenibacillus mucilaginosus 3016: gi|379719559|ref|YP_005311690.1|

Paenibacillus terrae HPL-003: gi|374323860|ref|YP_005076989.1|

Actinoplanes sp. SE50/110: gi|386852117|ref|YP_006270130.1|

Saccharopolyspora erythraea NRRL 2338: gi|134102322|ref|YP_001107983.1|

Streptomyces cattleya NRRL 8057 = DSM 46488: gi|386358173|ref|YP_006056419.1|

Ilumatobacter coccineus: gi|470176940|ref|YP_007562984.1|

Emiliania huxleyi CCMP1516 : jgi|Emihu1|197397|gm1.500576

Emiliania huxleyi CCMP1516 : jgi|Emihu1|450608|estExtDG_Genemark1.C_280041

Emiliania huxleyi CCMP1516 : jgi|Emihu1|454338|estExtDG_Genemark1.C_1070174

Emiliania huxleyi CCMP1516 : jgi|Emihu1|242279|gm1.35500042

Thalassiosira pseudonana CCMP1335: jgi|Thaps3|262318|thaps1_ua_kg.chr_4000328

Phaeodactylum tricornutumCCAP 1055/1: jgi|Phatr2|44981|estExt_fgenesh1_pg.C_chr_50350

Ectocarpus siliculosus: Esi0002_0321

Porphyridium purpureum 02_2012: evm.model.contig_4398.1

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|43803|MicpuC2.fgenesh1_pm.C_scaffold_1000049

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|52550|MicpuC2.EuGene.0000130107

Micromonas sp. RCC299 : jgi|MicpuN2|60143|EuGene.0700010428

Micromonas sp. RCC299 : jgi|MicpuN2|76276|gw2.05.936.1

Bathycoccus prasinos : Bathy07g03970

Chlamydomonas reinhardtii 4.0: jgi|Chlre4|420868|pasa_Sanger_mRNA4736

Volvox carteri v199: Vocar20011638m|PACid:23124477

Volvox carteri f. nagariensis : jgi|Volca1|42929|gw1.40.140.1

Chlorella vulgaris : jgi|Chlvu1|17938|gw1.5.252.1

Asterochloris sp. Cgr/DA1pho v1.0: jgi|Astpho1|35577|fgenesh1_pm.00117_#_8

Coccomyxa subellipsoidea sp. C-169 v2: jgi|Coc_C169_1|46879|estExt_fgenesh1_pg.C_50168

Physcomitrella patens: jgi|Phypa1_1|198646|estExt_gwp_gw1.C_3350007

Amborella trichopoda 22: ERN18018

Musa acuminata 22: GSMUA_Achr3P00870_001

Musa acuminata 22: GSMUA_Achr7P05390_001

Musa balbisiana: ITC1587_Bchr7_P19035

Sorghum bicolor : jgi|Sorbi1|5061984|Sb10g025220

Zea mays v181: GRMZM2G169333_T07|PACid:20820678

Zea mays subsp. mays : GRMZM2G169333_P07

Setaria italica v164: Si022091m|PACid:19701005

Setaria italica v164: Si006592m|PACid:19703357

Panicum virgatum v202: Pavirv00035294m|PACid:23782734

Panicum virgatum v202: Pavirv00070253m|PACid:23800100

Oryza sativa v193: LOC_Os06g43610.1|PACid:21929900

Oryza sativa v193: LOC_Os08g21330.1|PACid:21887640

Oryza sativa v193: LOC_Os08g21330.3|PACid:21887641

Oryza sativa ssp. japonica 5.0: LOC_Os06g43610.1|13106.m04567|protein

Oryza sativa ssp. japonica 5.0: LOC_Os08g21330.1|13108.m02199|protein

Oryza sativa ssp. japonica 5.0: LOC_Os08g21330.3|13108.m02200|protein

Oryza brachyantha 22: OB06G30170.1

Oryza brachyantha 22: OB08G18870.1

Oryza nivara 22: ONIVA08G10650.1

Oryza nivara 22: ONIVA08G10650.2

Oryza nivara 22: ONIVA06G26430.1

Oryza punctata 22: OPUNC06G20200.1

Oryza punctata 22: OPUNC08G09240.1

Oryza glaberrima: ORGLA08G0086600.1

Oryza glaberrima: ORGLA06G0187600.1

Oryza glumaepatula 22: OGLUM08G10830.1

Oryza glumaepatula 22: OGLUM08G10830.2

Oryza glumaepatula 22: OGLUM08G10830.3

Oryza glumaepatula 22: OGLUM06G23630.1

Oryza meridionalis 22: OMERI06G20810.1

Oryza barthii 22: OBART08G09930.1

Oryza barthii 22: OBART08G09930.2

Oryza barthii 22: OBART06G22540.1

Brachypodium distachyon : EG:BRADI1G30490.1

Brachypodium distachyon : EG:BRADI3G20150.1

Aegilops tauschii 22: EMT09076

Triticum aestivum 22: Traes_2AS_32405E54F.1

Triticum aestivum 22: Traes_7AL_82AF58D4C.1

Triticum aestivum 22: Traes_7BL_4FC7BECC8.2

Triticum aestivum 22: Traes_7DL_7CAF8712F.1

Triticum urartu 22: TRIUR3_32534-P1

Actinidia chinensis Hongyang : Achn097851

Solanum tuberosum : PGSC0003DMP400024867

Solanum tuberosum : PGSC0003DMP400024869

Solanum lycopersicum v.2.3: Solyc03g117510.2.1

Mimulus guttatus v140: mgv1a006592m|PACid:17677405

Vitis vinifera : GSVIVT01017379001

Populus trichocarpa v156: POPTR_0003s02540.1|PACid:18216764

Manihot esculenta v147: cassava4.1_009072m|PACid:17962978

Manihot esculenta v147: cassava4.1_025987m|PACid:17983320

Linum usitatissimum v200: Lus10035876|PACid:23141204

Prunus persica v139: ppa006603m|PACid:17654609

Cucumis sativus v122: Cucsa.096060.1|PACid:16957977

Glycine max v109: Glyma13g44360.1|PACid:16293749

Phaseolus vulgaris v186: Phvulv091028546m|PACid:23557439

Phaseolus vulgaris v186: Phvulv091028547m|PACid:23557440

Medicago truncatula : Medtr2g104100.1

Arabidopsis thaliana 10: AT1G52500.2

Capsella rubella v183: Carubv10011435m|PACid:20892567

Brassica rapa Chiifu-401 1.2: Bra030381

Thellungiella halophila v173: Thhalv10011553m|PACid:20184860

Citrus sinensis v154: orange1.1g015345m|PACid:18116733

Citrus sinensis v154: orange1.1g022922m|PACid:18116734

Citrus sinensis v154: orange1.1g022931m|PACid:18116735

Citrus clementina v165: clementine0.9_011716m|PACid:19258884

Gossypium raimondii v221: Gorai.011G089400.1|PACid:26807973

Gossypium raimondii v221: Gorai.011G089400.2|PACid:26807974

Gossypium raimondii v221: Gorai.011G089400.4|PACid:26807975

Gossypium raimondii v221: Gorai.011G089400.3|PACid:26807976

Eucalyptus grandis v201: Eucgr.F03905.1|PACid:23585101

Spizellomyces punctatus DAOM BR117 : SPPG_07756T0

Allomyces macrogynus ATCC 38327 : AMAG_16509T0

Allomyces macrogynus ATCC 38327 : AMAG_16733T0

Catenaria anguillulae PL171 v1.0: jgi|Catan1|102888|gw1.46.31.1

Tuber melanosporum Vittad : GSTUMT00011802001

Tuber melanosporum Mel28 22: CAZ86391

Penicillium marneffei ATCC 18224 : Pmar_ATCC_18224:PMAA_041960.t1

Aspergillus clavatus NRRL 1 : ACLA_050970

Aspergillus flavus NRRL3357 : AFL2T_02007

Aspergillus niger ATCC 1015 : e_gw1_1.653.1

Aspergillus niger 22: CADANGAP00000697

Aspergillus oryzae RIB40 : AO090003001022

Aspergillus wentii v1.0: jgi|Aspwe1|100210|e_gw1.1.2495.1

Aspergillus tubingensis v1.0: jgi|Asptu1|116126|e_gw1.2.250.1

Aspergillus terreus NIH2624 : ATET_03872

Neosartorya fischeri NRRL 181 : NFIA_104300||Formamidopyrimidine-DNA

Aspergillus carbonarius ITEM 5010 : jgi|Aspca1|27572|fgenesh1_pg.00009_#_383

Aspergillus glaucus: jgi|Aspgl1|68140|fgenesh1_pm.16_#_128

Aspergillus versicolor v1.0: jgi|Aspve1|138441|e_gw1.9.1009.1

Aspergillus sydowii v1.0: jgi|Aspsy1|154358|e_gw1.7.22.1

Aspergillus nidulans FGSC A4 : ANID_03629T0

Aspergillus brasiliensis v1.0: jgi|Aspbr1|119831|e_gw1.3.733.1

Aspergillus fumigatus Af293: Afu4g11930

Aspergillus acidus v1.0: jgi|Aspfo1|55964|fgenesh1_pm.1_#_767

Penicillium chrysogenum v1.0: jgi|Pench1|37604|fgenesh1_pm.5_#_377

Penicillium chrysogenum Wisconsin 54-1255 : Pchr_Wisconsin_54-1255:Pc22g05070.t1

Aspergillus zonatus v1.0: jgi|Aspzo1|61166|e_gw1.3.419.1

Trichophyton rubrum CBS 118892 : TERG_07306T0

Trichophyton tonsurans CBS 112818 : TESG_07039T0

Trichophyton verrucosum HKI 0517 : TRV_04635

Trichophyton equinum CBS 127.97 : TEQG_07536T0

Microsporum canis CBS 113480 : MCYG_06299T0

Histoplasma capsulatum class NAmI strain WU24 : HCAG_01493T0

Ajellomyces dermatitidis SLH14081 : BDBG_05872T0

Coccidioides immitis RS : CIMG_01625T0

Coccidioides posadasii RMSCC 3488 : CPAT_01213

Paracoccidioides brasiliensis Pb18 : PADG_01795T0

Aureobasidium pullulans var. subglaciale EXF-2481 v1.0: jgi|Aurpu_var_sub1|864|gm1.864_g

Mycosphaerella fijiensis CIRAD86 : jgi|Mycfi1|14826|gw1.1.2448.1

Septoria musiva v1.0: jgi|Sepmu1|113514|gm1.1253_g

Dothistroma septosporum: jgi|Dotse1|165590|estExt_Genewise1Plus.C_1_t90418

Zasmidium cellare ATCC 36951 v1.0: jgi|Zasce1|30407|gm1.14769_g

Microsporum gypseum : MGYG_06744

Mycosphaerella graminicola IPO323 : jgi|Mycgr1|15295|gw.1.2975.1

Stagonospora nodorum : SNOT_07014

Pyrenophora tritici-repentis : PTRT_00942

Pyrenophora teres f. teres 22: EFQ91877

Cochliobolus lunatus m118 v2.0: jgi|Coclu2|45183|estExt_Genemark1.C_140260

Cochliobolus heterostrophus : jgi|CocheC5_1|84788|estExt_Genewise1.C_60527

Cochliobolus carbonum 26-R-13 v1.0: jgi|Cocca1|7568|gm1.7568_g

Cochliobolus victoriae FI3 v1.0: jgi|Cocvi1|29633|gm1.8237_g

Cochliobolus miyabeanus ATCC 44560 v1.0: jgi|Cocmi1|5273|gm1.5273_g

Setosphaeria turcica v1.0: jgi|Settu1|43968|estExt_Genemark1.C_7_t10257

Didymella exigua CBS 183.55 v1.0: jgi|Didex1|3203|gm1.3203_g

Sclerotinia sclerotiorum : SS1T_02408

Botrytis cinerea B05.10 : BC1T_05953

Amorphotheca resinae v1.0: jgi|Amore1|57557|estExt_fgenesh1_pg.C_4_t10330

Trichoderma harzianum CBS 226.95 v1.0: jgi|Triha1|35611|gw1.5.15.1

Trichoderma virens Gv29-8 : jgi|Trive1|37124|e_gw1.6.293.1

Trichoderma reesei 1.2: jgi|Trire2|40346|gw1.26.213.1

Trichoderma atroviride : jgi|Triat1|16905|gw1.3.1294.1

Trichoderma asperellum CBS 433.97 v1.0: jgi|Trias1|55282|fgenesh1_kg.3_#_359_#_Locus7539v1rpkm5.64

Fusarium verticillioides 7600 : FVEG_02120T0

Fusarium oxysporum f. sp. lycopersici 4286 : FOXG_03249T0

Nectria haematococca mpVI : jgi|Necha2|77625|fgenesh1_pg.sca_2_chr3_3_0000347

Fusarium graminearum : FGSG_08451T0

Glomerella graminicola 22: EFQ34416

Acremonium alcalophilumv 1.0: jgi|Acral1_c3a|1082212|estExt_fgenesh2_pg.C_50660

Verticillium dahliae VdLs.17 : VDAG_05568T0

Verticillium albo-atrum VaMs.102 : VDBG_07996T0

Cryphonectria parasitica : jgi|Crypa1|74463|fgenesh1_pg.C_scaffold_9000178

Neurospora crassa OR74A : NCU05984T0

Neurospora discreta FGSC 8579 : jgi|Neudi1|158392|estExt_fgenesh3_pm.C_130188

Neurospora tetrasperma : jgi|Neute1|157661|estExt_fgenesh1_pg.C_110224

Thielavia terrestris NRRL 8126 : jgi|Thite1|123506|fgenesh2_pm.5_#_217

Sporotrichum thermophile ATCC 42464 : jgi|Spoth1|23098|gw1.5.2004.1

Podospora anserina : Pa_4_6840|chrm4_SC4|Putative

Magnaporthe grisea 70-15 : MGG_11447T0

Apiospora montagnei NRRL 25634 v1.0: jgi|Apimo1|229257|estExt_Genewise1Plus.C_1010019

Daldinia eschscholzii EC12 v1.0: jgi|DalEC12_1|318935|fgenesh1_kg.16_#_98_#_Locus4294v1rpkm24.07

Tremella mesenterica : jgi|Treme1|15463|gw1.6.275.1

Dichomitus squalens: jgi|Dicsq1|67087|e_gw1.39.163.1

Phanerochaete chrysosporium RP-78 2.1: jgi|Phchr1|7637|fgenesh1_pg.C_scaffold_14000023

Fomitopsis pinicola FP-58527 SS1 v3.0: jgi|Fompi3|1030790|fgenesh1_pm.34_#_11

Fomitopsis pinicolav1.0: jgi|Fompi1|150759|estExt_fgenesh1_pm.C_250061

Wolfiporia cocos MD-104 SS10 v1.0: jgi|Wolco1|159936|estExt_Genemark1.C_1_t10291

Tulasnella calospora AL13/4D v1.0: jgi|Tulca1|220647|MIX11053_16650_82

Fomitiporia mediterranea v1.0: jgi|Fomme1|140284|estExt_fgenesh1_pm.C_5_t20133

Sebacina vermifera MAFF 305830 v1.0: jgi|Sebve1|333998|fgenesh1_kg.161_#_8_#_Locus10291v1rpkm7.05

Punctularia strigosozonata v1.0: jgi|Punst1|94537|estExt_Genewise1Plus.C_1_t20192

Gloeophyllum trabeumv1.0: jgi|Glotr1_1|135611|estExt_Genemark1.C_00001_t30089

Heterobasidion annosum : jgi|Hetan1|154087|estExt_fgenesh2_pm.C_10813

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|151658|gm1.588_g

Schizophyllum commune : jgi|Schco1|231883|fgenesh2_pg.1_#_1606

Agaricus bisporus var. bisporus : jgi|Agabi_varbisH97_2|41042|gw1.1.743.1

Amanita muscaria Koide v1.0: jgi|Amamu1|183205|fgenesh1_pm.2_#_14

Pleurotus ostreatus : jgi|PleosPC15_1|155064|genemark.2929_g

Coprinopsis cinerea okayama7 130 v3: CC1G_03765T0

Scleroderma citrinum Foug A v1.0: jgi|Sclci1|1222215|fgenesh1_kg.156_#_47_#_Locus5170v1rpkm26.60

Pisolithus tinctorius Marx 270 v1.0: jgi|Pisti1|1002485|fgenesh1_kg.39_#_224_#_Locus6630v2rpkm6.08

Pisolithus microcarpus 441 v1.0: jgi|Pismi1|8857|gm1.3381_g

Hydnomerulius pinastri v2.0: jgi|Hydpi2|25023|gm1.2178_g

Coniophora puteana: jgi|Conpu1|133823|estExt_fgenesh1_pm.C_1_t10234

Serpula lacrymans var. lacrymans S7.9 : jgi|Serla_S7_9|458886|estExt_fgenesh2_kg.C_30326

Piloderma croceum F 1598 v1.0: jgi|Pilcr1|818247|fgenesh1_kg.00018_#_274_#_Locus3397v1rpkm62.44

Sphaerobolus stellatus v1.0: jgi|Sphst1|227469|estExt_Genewise1Plus.C_36_t20039

Microbotryum violaceum 22: MVLG_02691T0

Rhodotorula graminis WP1 v1.0: jgi|Rhoba1_1|52681|estExt_Genemark1.C_5_t10029

Mucor circinelloides : jgi|Mucci1|93062|estExt_fgeneshMC_pg.C_90125

Proterospongia sp. ATCC 50818 : PTSG_03950T0

Crassostrea gigas 22: EKC40864

Gallus gallus 76_4: ENSGALP00000017422

Echinops telfairi 76: ENSETEP00000003220

Pteropus vampyrus 76_1: ENSPVAP00000002133

Ailuropoda melanoleuca 76_1: ENSAMEP00000003918

Tupaia belangeri 76: ENSTBEP00000009908

Physcomitrella patens subsp. patens 22: PP1S101_82V6.1

Physcomitrella patens subsp. patens 22: PP1S221_62V6.1

Physcomitrella patens subsp. patens 22: PP1S335_14V6.1